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Zebra_Finch_Functional_Homotopy
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This repository contains key data supporting our findings of widespread functional homotopy in the zebra finch brain.

Preprint doi: https://doi.org/10.1101/271072

Branch: master
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Zebra_Finch_...
Elliot Layden 722f0741ea Update 'datacite.yml' 6 years ago
correlation_matrices aa5a456512 correlation_matrices 6 years ago
template_rois 8ae61ad2c4 Update 'template_rois/SongSystemROIs_IDs.txt' 6 years ago
voxelwise_images 5a2d1120a7 Upload files to 'voxelwise_images' 6 years ago
Bird_IDs_ages.xlsx c602dace2b Upload files to '' 6 years ago
LICENSE ced6d416b4 Initial commit 6 years ago
README.md ff614d3bf9 Update 'README.md' 6 years ago
datacite.yml 722f0741ea Update 'datacite.yml' 6 years ago

README.md

Zebra_Finch_Functional_Homotopy

This repository contains key data supporting our findings of widespread functional homotopy in the zebra finch brain.

doi: https://doi.org/10.1101/271072

correlation_matrices

Correlation matrices are fully preprocessed and stored in the variable 'corrmat' within respective .mat files:

Males: Nuisance regression (linear & quadratic trends + 6 rigid-body motion parameters + 1st 5 PC's of CSF signals + body temperature) -> bandpass filtering [0.008, 0.10 Hz])

Females: Nuisance regression (linear + quadratic trends, 6 rigid-body motion parameters, 1st 5 PC's of CSF signals) -> bandpass filtering [0.008, 0.10 Hz])

-see Birds_IDs_ages.xlsx for further info regarding file correspondences, ages, and bird ID's

voxelwise_images

mirrored_groupwise_template.nii = the right hemisphere of our 'GroupwiseTemplate.nii' mirrored across the midline to create a symmetrical brain template for voxel-mirrored homotopic connectivity (VMHC) analyses

voxelwise_homotopy_tstats.nii = image of t-statistics testing voxel-wise homotopic functional connectivity across the 19 male scans

voxelwise_homotopy_clusters.nii = image of cluster-thresholded voxel-wise homotopic functional connectivity t-statistics (primary: p < 0.001, cluster-extent: p-FWE < 0.05)

template_rois

GroupwiseTemplate.nii = group-wise template created by ANTs across males

SongSystemROIs.nii = custom regions of interest manually delineated on the above template

SongSystemROIs_IDs.txt = labels file for 'SongSystemROIs.nii'

datacite.yml
Title Interhemispheric Integration for Complex Behaviors, Absent the Corpus Callosum in Normal Ontogeny: Supporting Data
Authors Layden,Elliot;Department of Psychology, The University of Chicago, Chicago, IL 60637
Schertz,Kathryn;Department of Psychology, The University of Chicago, Chicago, IL 60637
London,Sarah;Department of Psychology, The University of Chicago, Chicago, IL 60637
Berman,Marc;Department of Psychology, The University of Chicago, Chicago, IL 60637
Description This repository contains neuroimaging data and correlation matrices supporting our main findings. Preprint: doi: https://doi.org/10.1101/271072
License Creative Commons CC0 1.0 Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/)
References Interhemispheric Integration for Complex Behaviors, Absent the Corpus Callosum in Normal Ontogeny [] (IsSupplementTo)
Funding Big Ideas Generator (BIG) at the University of Chicago
National Science Foundation, BCS-1632445
Keywords functional homotopy
resting-state fMRI
zebra finch
interhemispheric coordination
corpus callosum
Resource Type Dataset