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code natural movies

Helene Schreyer 3 years ago
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      naturalMovies/code natural movies/BC_mainNaturalMovies.m

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naturalMovies/code natural movies/BC_mainNaturalMovies.m

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+%Guide for performing a linear-nonlinear model (LN-model)
+%analysis from voltage recordings of bipolar cells (BC) under natural
+%stimuli
+%Check out the Documentation_Data.pdf, which contains relevant information
+%Check BC_mainWhiteNoise -> from here you get the filter and output
+%nonlinearity for performing the prediction to the movie.
+clear;
+close all;
+
+%% Prediction to the natural movies
+loadData='Z:\Manuscript\BC_XY_LN\Puplishing\DataAvailable\naturalMovies\'; %path of the BC files for spatiotemporal white noise (has to be adapted to your own path)
+filename='16d200016Comp.mat'; %BC file to analyse: for example here we use file 16d200016Comp from cell 5, recorded in retina 2 on 161219
+Hz=25; % given in the excel file LogInfo_NaturalMovies.xlsx for the corresponding file
+movienbr=4; %given in the excel file LogInfo_NaturalMovies.xlsx for the corresponding file
+[naturalMovie_output]=BC_predNaturalMovies(loadData,filename,movieData,Hz,STA_output,NL_output);%example code to get the prediction to natural movies from the spatiotemporal white noise LN-model
+