Chris Klink
4c6918ae5b
gin commit from chris-mh16
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3 år sedan | |
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| .. | ||
| ReadMe.txt | 3 år sedan | |
| ck_Load.m | 3 år sedan | |
| ck_Run.m | 3 år sedan | |
ReadMe.txt
====================================
Workflow EPHYS pRF's
====================================
These pre-fitting scripts are located in the <..>/Analysis_code/Ephys folder
1 Xing provided the preprocessed data
2 ck_Run.m
- Central script to coordinate data handling
- Uses:
2a ck_Load.m
- Loads data from <..>/Raw_data/EPHYS
- Data_blackrock/ Data_matlab / Log_pRF / Channelmaps
[- The raw data ns6 data is not shared because it is too large]
- Saves in <..>/Preprocessed_data/EPHYS
3 a Copy <..>/Preprocessed_data/EPHYS to LISA <...>/PRF/Data/ephys
b Prep data further with <..>/Analysis_code/LISA scripts
c Run fits on LISA
d Copy fit results from LISA <...>/PRF/Results/ back to local
<..>/Preprocessed_data/EPHYS//
4 Copy the classic RF mapping data to FitResults/EPHYS//classicRF
5 Continue analysis in <..>/Analysis_code/PostFit
Workflow EPHYS pRF's
====================================
These pre-fitting scripts are located in the <..>/Analysis_code/Ephys folder
1 Xing provided the preprocessed data
2 ck_Run.m
- Central script to coordinate data handling
- Uses:
2a ck_Load.m
- Loads data from <..>/Raw_data/EPHYS
- Data_blackrock/ Data_matlab / Log_pRF / Channelmaps
[- The raw data ns6 data is not shared because it is too large]
- Saves in <..>/Preprocessed_data/EPHYS
3 a Copy <..>/Preprocessed_data/EPHYS to LISA <...>/PRF/Data/ephys
b Prep data further with <..>/Analysis_code/LISA scripts
c Run fits on LISA
d Copy fit results from LISA <...>/PRF/Results/ back to local
<..>/Preprocessed_data/EPHYS//
4 Copy the classic RF mapping data to FitResults/EPHYS//classicRF
5 Continue analysis in <..>/Analysis_code/PostFit
| datacite.yml | |
|---|---|
| Title | Population receptive fields in non-human primates from whole-brain fMRI and large-scale neurophysiology in visual cortex. |
| Authors |
Klink,Chris;Netherlands Institute for Neuroscience;ORCID:0000-0002-6784-7842
Chen,Xing;Netherlands Institute for Neuroscience Vanduffel,Wim;KU Leuven;ORCID:0000-0002-9399-343X Roelfsema,Pieter;Netherlands Institute for Neuroscience;ORCID:0000-0002-1625-0034 |
| Description | This data-set contains all data and code for the paper 'Population receptive fields in non-human primates from whole-brain fMRI and large-scale neurophysiology in visual cortex.' |
| License | Creative Commons CC0 1.0 Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/) |
| References |
Direct comparison of population receptive fields from fMRI and large-scale neurophysiological recordings in awake non-human primates. (2020) P. Christiaan Klink, Xing Chen, Wim Vanduffel, Pieter R. Roelfsema; bioRxiv 2020.09.05.284133; doi: https://doi.org/10.1101/2020.09.05.284133 [doi:10.1101/2020.09.05.284133] (IsSupplementTo)
|
| Funding |
NWO, Crossover Program 17619 'INTENSE'
NWO, STW-Perspectief P15-42 'NESTOR' NWO, VENI 451.13.023 EU FP7, ERC-339490 'Cortic_al_gorithms' EU, Human Brain Project (agreements 720270 and 748 785907, SGA1 and SGA2) Friends Foundation of the Netherlands Institute for Neuroscience |
| Keywords |
Neuroscience
Neuroimaging Neurophysiology Non-human primate Population receptive field |
| Resource Type |
Dataset |