Chris Klink 4c6918ae5b gin commit from chris-mh16 3 år sedan
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ReadMe.txt 4c6918ae5b gin commit from chris-mh16 3 år sedan
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ck_Run.m 4c6918ae5b gin commit from chris-mh16 3 år sedan

ReadMe.txt

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Workflow EPHYS pRF's
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These pre-fitting scripts are located in the <..>/Analysis_code/Ephys folder

1 Xing provided the preprocessed data

2 ck_Run.m
- Central script to coordinate data handling
- Uses:

2a ck_Load.m
- Loads data from <..>/Raw_data/EPHYS
- Data_blackrock/ Data_matlab / Log_pRF / Channelmaps
[- The raw data ns6 data is not shared because it is too large]
- Saves in <..>/Preprocessed_data/EPHYS

3 a Copy <..>/Preprocessed_data/EPHYS to LISA <...>/PRF/Data/ephys
b Prep data further with <..>/Analysis_code/LISA scripts
c Run fits on LISA
d Copy fit results from LISA <...>/PRF/Results/ back to local
<..>/Preprocessed_data/EPHYS//

4 Copy the classic RF mapping data to FitResults/EPHYS//classicRF

5 Continue analysis in <..>/Analysis_code/PostFit
datacite.yml
Title Population receptive fields in non-human primates from whole-brain fMRI and large-scale neurophysiology in visual cortex.
Authors Klink,Chris;Netherlands Institute for Neuroscience;ORCID:0000-0002-6784-7842
Chen,Xing;Netherlands Institute for Neuroscience
Vanduffel,Wim;KU Leuven;ORCID:0000-0002-9399-343X
Roelfsema,Pieter;Netherlands Institute for Neuroscience;ORCID:0000-0002-1625-0034
Description This data-set contains all data and code for the paper 'Population receptive fields in non-human primates from whole-brain fMRI and large-scale neurophysiology in visual cortex.'
License Creative Commons CC0 1.0 Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/)
References Direct comparison of population receptive fields from fMRI and large-scale neurophysiological recordings in awake non-human primates. (2020) P. Christiaan Klink, Xing Chen, Wim Vanduffel, Pieter R. Roelfsema; bioRxiv 2020.09.05.284133; doi: https://doi.org/10.1101/2020.09.05.284133 [doi:10.1101/2020.09.05.284133] (IsSupplementTo)
Funding NWO, Crossover Program 17619 'INTENSE'
NWO, STW-Perspectief P15-42 'NESTOR'
NWO, VENI 451.13.023
EU FP7, ERC-339490 'Cortic_al_gorithms'
EU, Human Brain Project (agreements 720270 and 748 785907, SGA1 and SGA2)
Friends Foundation of the Netherlands Institute for Neuroscience
Keywords Neuroscience
Neuroimaging
Neurophysiology
Non-human primate
Population receptive field
Resource Type Dataset