Human_Amygdala_MUA_sEEG_FearVideo/code_MATLAB/Main_Plot_Figures.m

%% Close all figures, clear variables and command window
close all
clear
clc

%% Directory of the repository and the NIX library
strMainPath = 'Human_Amygdala_MUA_sEEG_FearVideo\';
strNIXLibraryPath = 'nix-mx_Win64_1.4.1\';
strFieldTripPath = 'fieldtrip-20200315\';

%% Add necessary folders to the MATLAB path
addpath([strMainPath,'\code_MATLAB\'])
addpath(genpath(strNIXLibraryPath))
addpath(strFieldTripPath)
ft_defaults

warning('strMainPath should be the full path of the folder Human_Amygdala_MUA_sEEG_FearVideo')
warning('strNIXLibraryPath should be the full path of the NIX library ''nix-mx_Win64_1.4.1''')
warning('strFieldTripPath should be the full path of the FieldTrip toolbox ''fieldtrip-2020xxxx''')

%% NIX data files
strNIXFileNames = dir([strMainPath,'\data_NIX\*.h5']);
strNIXFileNames = {strNIXFileNames.name}';

assert(~isempty(strNIXFileNames),'strMainPath should be the full path of the folder Human_Amygdala_MUA_sEEG_FearVideo')

%% Figure 1
nExampleNeuron = 1;
fig1 = Figure_1([strMainPath,'\data_NIX\'],nExampleNeuron);

%% Figure 2
fig2 = Figure_2([strMainPath,'\data_NIX\']);