gin commit from med068pc183

Modified files: 34

Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_meaRtools_output/Rat_31017_MEA4_STTC.csv

@@ -1,13 +1,13 @@
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Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_meaRtools_output/Rat_31017_MEA4_bursts_per_min.csv

@@ -1,12 +1,12 @@
 "well","treatment","divDIV24","divDIV28","divDIV31"
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Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_meaRtools_output/Rat_31017_MEA4_mean_dur.csv

@@ -1,13 +1,13 @@
 "well","treatment","divDIV24","divDIV28","divDIV31"
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Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_meaRtools_output/Rat_31017_MEA4_mean_freq_in_burst.csv

@@ -1,13 +1,13 @@
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Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_meaRtools_output/Rat_31017_MEA4_mean_spikes_in_burst.csv

@@ -1,13 +1,13 @@
 "well","treatment","divDIV24","divDIV28","divDIV31"
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-"A2","NoTreatment","41.548","31.153","37.417"
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-"B3","NoTreatment","36.993","35.479","27.7"
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 "C4","NoTreatment","44.972","36.831","37.661"

Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_meaRtools_output/Rat_31017_MEA4_meanfiringrate_by_active_electordes.csv

@@ -1,13 +1,13 @@
 "well","treatment","divDIV24","divDIV28","divDIV31"
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Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_meaRtools_output/Rat_31017_MEA4_per_spikes_in_burst.csv

@@ -1,13 +1,13 @@
 "well","treatment","divDIV24","divDIV28","divDIV31"
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 "C2","NoTreatment","97.019","98.492","98.953"
 "C3","NoTreatment","97.487","97.357","97.239"
 "C4","NoTreatment","96.256","99.1","97.651"

Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_spikes_noise_explogs/Rat_31017_MEA4_DIV24_spikes.csv

@@ -1 +0,0 @@
-../../../../.git/annex/objects/m9/j6/MD5-s97928927--c7fa00a0c2559cdc6fa3725e57db12ca/MD5-s97928927--c7fa00a0c2559cdc6fa3725e57db12ca

Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_spikes_noise_explogs/Rat_31017_MEA4_DIV24_spikes.csv

@@ -0,0 +1 @@
+/annex/objects/MD5-s97935801--4ed9fe43bae3dd4ca87df935e54b5c9f

Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_spikes_noise_explogs/Rat_31017_MEA4_DIV28_spikes.csv

@@ -1 +0,0 @@
-../../../../.git/annex/objects/WV/fq/MD5-s99097983--f1573917d651a3125020e2aeefa33835/MD5-s99097983--f1573917d651a3125020e2aeefa33835

Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_spikes_noise_explogs/Rat_31017_MEA4_DIV28_spikes.csv

@@ -0,0 +1 @@
+/annex/objects/MD5-s99097983--f1573917d651a3125020e2aeefa33835

Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_spikes_noise_explogs/Rat_31017_MEA4_DIV31_spikes.csv

@@ -1 +0,0 @@
-../../../../.git/annex/objects/9v/73/MD5-s83481011--6ca1039d70205a4f2022af48550b8724/MD5-s83481011--6ca1039d70205a4f2022af48550b8724

Data/PCA/Rat_MEA4_PCA/Rat_MEA4_PCA_spikes_noise_explogs/Rat_31017_MEA4_DIV31_spikes.csv

@@ -0,0 +1 @@
+/annex/objects/MD5-s83487503--f13de76c9ec2ab236ded68467668cace

Data/PCA/hPSC_MEA4_PCA/hPSC_MEA4_PCA_spikes_noise_explogs/hPSC_171017_MEA4_DIV24_spikes.csv

@@ -33914,7 +33914,6 @@ B3_24,44.25584
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@@ -291634,7 +291612,6 @@ C4_44,444.76472
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-C1_73,444.7664
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@@ -301202,7 +301179,6 @@ C3_62,460.1108
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@@ -317446,7 +317422,6 @@ C1_74,486.79464
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@@ -319717,7 +319692,6 @@ C2_18,491.38
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@@ -336642,7 +336616,6 @@ C1_18,521.50056
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@@ -352179,7 +352152,6 @@ C4_15,543.20672
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@@ -363131,7 +363103,6 @@ B3_24,564.3884
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@@ -369002,7 +368973,6 @@ C3_75,573.2888
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@@ -380675,7 +380645,6 @@ B4_26,589.53872
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Data/PCA/hPSC_MEA5_PCA/hPSC_MEA5_PCA_meaRtools_output/hPSC_21018_MEA5_STTC.csv

@@ -1,5 +1,5 @@
 "well","treatment","divDIV70","divDIV73","divDIV77"
-"B1","NoTreatment","0.094463023722155","0.141065600474465","0.300992756297675"
-"B2","NoTreatment","0.0781758445784293","0.0541194578647397","0.160086184328166"
-"B3","NoTreatment","0.168871816791192","0.181510325526993","0.246703997505886"
-"B4","NoTreatment","0.075741120671423","0.120998062258939","0.110397836132216"
+"B1","NoTreatment","0.094463023722155","0.141065600474465","0.301101534574399"
+"B2","NoTreatment","0.0781758445784293","0.0541194578647397","0.160140072559497"
+"B3","NoTreatment","0.168871816791192","0.181510325526993","0.246757961718634"
+"B4","NoTreatment","0.075741120671423","0.120998062258939","0.110473760892939"

Data/PCA/hPSC_MEA5_PCA/hPSC_MEA5_PCA_meaRtools_output/hPSC_21018_MEA5_bursts_per_min.csv

@@ -1,5 +1,5 @@
 "well","treatment","divDIV70","divDIV73","divDIV77"
-"B1","NoTreatment","17.7252631578947","11.4511111111111","7.584"
+"B1","NoTreatment","17.7252631578947","11.4511111111111","7.58571428571429"
 "B2","NoTreatment","10.74","9.25","9.305"
 "B3","NoTreatment","13.932","13.0552941176471","7.23923076923077"
 "B4","NoTreatment","9.70285714285714","10.3036363636364","16.2461538461538"

Data/PCA/hPSC_MEA5_PCA/hPSC_MEA5_PCA_meaRtools_output/hPSC_21018_MEA5_mean_dur.csv

@@ -1,5 +1,5 @@
 "well","treatment","divDIV70","divDIV73","divDIV77"
-"B1","NoTreatment","0.42070141966142","0.437172263906856","0.562103119819141"
+"B1","NoTreatment","0.42070141966142","0.437172263906856","0.561954802259887"
 "B2","NoTreatment","0.36926298136646","0.861011099099098","0.888282399283797"
 "B3","NoTreatment","0.6405430430622","0.546299351351351","0.905298065887354"
-"B4","NoTreatment","0.824123946980855","0.926111067961165","0.654791927996211"
+"B4","NoTreatment","0.824123946980855","0.926111067961165","0.654854154429181"

Data/PCA/hPSC_MEA5_PCA/hPSC_MEA5_PCA_meaRtools_output/hPSC_21018_MEA5_mean_freq_in_burst.csv

@@ -1,5 +1,5 @@
 "well","treatment","divDIV70","divDIV73","divDIV77"
-"B1","NoTreatment","47.7881365214895","49.5910792697201","54.1653790239062"
-"B2","NoTreatment","56.0993067360285","47.2967656488044","46.3454252476746"
-"B3","NoTreatment","50.2376566198852","61.8231308127721","55.7585274317617"
-"B4","NoTreatment","50.7221281022403","57.5994453575727","48.0156982624446"
+"B1","NoTreatment","47.7881365214895","49.5910792697201","54.1626731176098"
+"B2","NoTreatment","56.0993067360285","47.2967656488044","46.3476255405072"
+"B3","NoTreatment","50.2376566198852","61.8231308127721","55.7602541994074"
+"B4","NoTreatment","50.7221281022403","57.5994453575727","48.0146762814919"

Data/PCA/hPSC_MEA5_PCA/hPSC_MEA5_PCA_meaRtools_output/hPSC_21018_MEA5_mean_spikes_in_burst.csv

@@ -1,5 +1,5 @@
 "well","treatment","divDIV70","divDIV73","divDIV77"
-"B1","NoTreatment","24.471","25.547","34.647"
-"B2","NoTreatment","27.766","62.41","37.894"
-"B3","NoTreatment","37.645","43.375","47.966"
-"B4","NoTreatment","51.44","59.891","38.715"
+"B1","NoTreatment","24.471","25.547","34.639"
+"B2","NoTreatment","27.766","62.41","37.895"
+"B3","NoTreatment","37.645","43.375","47.967"
+"B4","NoTreatment","51.44","59.891","38.719"

Data/PCA/hPSC_MEA5_PCA/hPSC_MEA5_PCA_meaRtools_output/hPSC_21018_MEA5_meanfiringrate_by_active_electordes.csv

@@ -1,5 +1,5 @@
 "well","treatment","divDIV70","divDIV73","divDIV77"
-"B1","NoTreatment","4.58102204417054","4.39422818586127","4.44681742337663"
-"B2","NoTreatment","4.73850381849828","6.02668159576456","5.18156206167923"
-"B3","NoTreatment","5.48764793425058","6.26725945880414","4.48674364914851"
-"B4","NoTreatment","4.97869807237077","5.73161870420032","5.73950425687562"
+"B1","NoTreatment","4.58102204417054","4.39422818586127","4.44768651577879"
+"B2","NoTreatment","4.73850381849828","6.02668159576456","5.18293327221256"
+"B3","NoTreatment","5.48764793425058","6.26725945880414","4.48684160137157"
+"B4","NoTreatment","4.97869807237077","5.73161870420032","5.73978062373427"

Data/PCA/hPSC_MEA5_PCA/hPSC_MEA5_PCA_meaRtools_output/hPSC_21018_MEA5_per_spikes_in_burst.csv

@@ -1,5 +1,5 @@
 "well","treatment","divDIV70","divDIV73","divDIV77"
-"B1","NoTreatment","65.168","57.616","70.364"
-"B2","NoTreatment","66.204","79.826","64.861"
+"B1","NoTreatment","65.168","57.616","70.362"
+"B2","NoTreatment","66.204","79.826","64.845"
 "B3","NoTreatment","74.675","77.599","79.874"
-"B4","NoTreatment","77.951","75.891","71.947"
+"B4","NoTreatment","77.951","75.891","71.951"

Data/PCA/hPSC_MEA5_PCA/hPSC_MEA5_PCA_spikes_noise_explogs/hPSC_21018_MEA5_DIV77_spikes.csv

@@ -43,6 +43,7 @@ B4_47,0.09024
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@@ -91943,6 +91969,7 @@ B1_11,128.19688
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Data/Rat_MEA1/Rat_MEA1_meaRtools_output/Rat_190617_MEA1_STTC.csv

@@ -1,13 +1,13 @@
 "well","treatment","divDIV2","divDIV7","divDIV10","divDIV14","divDIV17","divDIV21","divDIV24","divDIV28","divDIV31","divDIV35"
 "A1","NoTreatment",NA,NA,"0.136893389138233","0.747301871421479","0.894199279197964","0.94381741277654","0.958202757299942","0.947995357450099","0.840437212124626","0.726585911609368"
-"A2","NoTreatment","0.00385638486217243","0.0335683887615724","0.06269584853968","0.421588751262073","0.681677600658696","0.739357278798149","0.831299384221164","0.737885478228072","0.378105248999295","0.0515966801736129"
+"A2","NoTreatment","0.00385638486217243","0.0212899673593645","0.06269584853968","0.421588751262073","0.681677600658696","0.739357278798149","0.831299384221164","0.737885478228072","0.378105248999295","0.0515966801736129"
 "A3","NoTreatment",NA,NA,"0.162174302517057","0.410099892321616","0.521653452183564","0.592068055233473","0.487661038241947","0.456854347946176","0.210970654445946","-0.00956830062161175"
-"A4","NoTreatment",NA,"0.581894520645771","0.118207894744163","0.369189946006593","0.657540608912278","0.766070501993589","0.787174860848172","0.691737085900053","0.506133056854255","0.359901424639687"
-"B1","NoTreatment","0.0139487517164911","-0.00448593779101888","0.0628305215116456","0.387847099184181","0.601185852257788","0.581588239968721","0.67102762080354","0.590242908259269","0.145505377826125","0.0389912859115587"
+"A4","NoTreatment",NA,"0.581894161472196","0.118207894744163","0.369189946006593","0.657540608912278","0.766070501993589","0.787174860848172","0.691737085900053","0.506133056854255","0.359901424639687"
+"B1","NoTreatment","0.0139487517164911","-0.00448664685971728","0.0628305215116456","0.387847099184181","0.601185852257788","0.581588239968721","0.67102762080354","0.590242908259269","0.145505377826125","0.0389912859115587"
 "B2","NoTreatment",NA,NA,"0.138718502697119","0.386390584504606","0.676629867210774","0.731228965708589","0.868168210917081","0.909008826054864","0.672175418353497","0.136954155291842"
 "B3","NoTreatment",NA,NA,"0.179746730094248","0.536264257488303","0.744843965539913","0.850908181914277","0.867190840246528","0.908306769681673","0.588197955077139","0.126389022758581"
 "B4","NoTreatment",NA,NA,"0.0558363441609407","0.449016649193981","0.712859598546631","0.846642584405641","0.814488182448917","0.760499953977405","0.442674813641704","0.152164299185887"
 "C1","NoTreatment",NA,NA,"0.0280045708140511","0.325705341688654","0.579476932036857","0.495430305983389","0.710082325680142","0.694972081483517","0.490535878538581","0.194755664647502"
 "C2","NoTreatment",NA,NA,"0.0071975009340769","0.387291328285207","0.599234263057644","0.737975728058205","0.76996107015887","0.740953882852809","0.513626018139588","0.306300948676793"
-"C3","NoTreatment",NA,"0.0146440435848448","0.159620885658185","0.570322027719664","0.791137877766402","0.873475276917202","0.937737797967555","0.909257409861945","0.750806578394732","0.532979338089656"
+"C3","NoTreatment",NA,"0.0146428644612223","0.159620885658185","0.570322027719664","0.791137877766402","0.873475276917202","0.937737797967555","0.909257409861945","0.750806578394732","0.532979338089656"
 "C4","NoTreatment",NA,NA,"0.119372837093592","0.526928335961708","0.805280718354016","0.890572228602113","0.891975004964493","0.848670378936793","0.788783230878819","0.470061415560123"

Data/Rat_MEA1/Rat_MEA1_meaRtools_output/Rat_190617_MEA1_meanfiringrate_by_active_electordes.csv

@@ -1,13 +1,13 @@
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Data/Rat_MEA1/Rat_MEA1_spikes_noise_explogs/Rat_190617_MEA1_DIV31_spikes.csv

@@ -1 +0,0 @@
-../../../.git/annex/objects/W3/gk/MD5-s25179679--8167456f71e4288985ebe3ea5ed20508/MD5-s25179679--8167456f71e4288985ebe3ea5ed20508

Data/Rat_MEA1/Rat_MEA1_spikes_noise_explogs/Rat_190617_MEA1_DIV31_spikes.csv

@@ -0,0 +1 @@
+/annex/objects/MD5-s25178952--20acafc279ddf58a9ebaa5c36cd08144

Data/hPSC_MEA1/hPSC_MEA1_meaRtools_output/hPSC_20517_MEA1_STTC.csv

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Data/hPSC_MEA1/hPSC_MEA1_meaRtools_output/hPSC_20517_MEA1_bursts_per_min.csv

@@ -1,7 +1,7 @@
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Data/hPSC_MEA1/hPSC_MEA1_meaRtools_output/hPSC_20517_MEA1_mean_dur.csv

@@ -1,7 +1,7 @@
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Data/hPSC_MEA1/hPSC_MEA1_meaRtools_output/hPSC_20517_MEA1_mean_freq_in_burst.csv

@@ -1,7 +1,7 @@
 "well","treatment","divDIV3","divDIV7","divDIV10","divDIV14","divDIV17","divDIV21","divDIV24","divDIV28","divDIV31","divDIV35","divDIV38","divDIV42","divDIV45","divDIV48","divDIV51","divDIV56","divDIV59","divDIV63","divDIV66"
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Data/hPSC_MEA1/hPSC_MEA1_meaRtools_output/hPSC_20517_MEA1_mean_spikes_in_burst.csv

@@ -1,7 +1,7 @@
 "well","treatment","divDIV3","divDIV7","divDIV10","divDIV14","divDIV17","divDIV21","divDIV24","divDIV28","divDIV31","divDIV35","divDIV38","divDIV42","divDIV45","divDIV48","divDIV51","divDIV56","divDIV59","divDIV63","divDIV66"
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Data/hPSC_MEA1/hPSC_MEA1_meaRtools_output/hPSC_20517_MEA1_meanfiringrate_by_active_electordes.csv

@@ -1,7 +1,7 @@
 "well","treatment","divDIV3","divDIV7","divDIV10","divDIV14","divDIV17","divDIV21","divDIV24","divDIV28","divDIV31","divDIV35","divDIV38","divDIV42","divDIV45","divDIV48","divDIV51","divDIV56","divDIV59","divDIV63","divDIV66"
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Data/hPSC_MEA1/hPSC_MEA1_meaRtools_output/hPSC_20517_MEA1_per_spikes_in_burst.csv

@@ -1,7 +1,7 @@
 "well","treatment","divDIV3","divDIV7","divDIV10","divDIV14","divDIV17","divDIV21","divDIV24","divDIV28","divDIV31","divDIV35","divDIV38","divDIV42","divDIV45","divDIV48","divDIV51","divDIV56","divDIV59","divDIV63","divDIV66"
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Data/hPSC_MEA3_Pharmacology/hPSC_MEA3Pharma_DIV29/hPSC_MEA3Pharma_DIV29_meaRtools_output/hPSC_120618_MEA3Pharma_STTC.csv

@@ -1,25 +1,25 @@
 "well","treatment","divDIV29"
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Data/hPSC_MEA3_Pharmacology/hPSC_MEA3Pharma_DIV29/hPSC_MEA3Pharma_DIV29_meaRtools_output/hPSC_120618_MEA3Pharma_bursts_per_min.csv

@@ -1,25 +1,25 @@
 "well","treatment","divDIV29"
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-"A7","Gabazine","9.085"
-"A8","Gabazine","3.46875"
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 "B7","KainicAcid","31.05"
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 "C5","Control","8.21076923076923"
-"C6","Control","3.612"
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-"C8","Control","4.855"
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 "D6","GABA","9.51"
 "D7","GABA","1.18363636363636"
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 "F5","D-AP5","0.12"
 "F6","D-AP5","1.74"
 "F7","D-AP5","2.4"
-"F8","D-AP5","0.12"
+"F8","D-AP5","NaN"

Data/hPSC_MEA3_Pharmacology/hPSC_MEA3Pharma_DIV29/hPSC_MEA3Pharma_DIV29_meaRtools_output/hPSC_120618_MEA3Pharma_mean_dur.csv

@@ -1,25 +1,25 @@
 "well","treatment","divDIV29"
-"A5","Gabazine","1.17074774990044"
-"A6","Gabazine","2.14871683492497"
-"A7","Gabazine","0.768144596577017"
-"A8","Gabazine","1.53933434052758"
-"B5","KainicAcid","0.259720799319729"
-"B6","KainicAcid","0.24198132048739"
+"A5","Gabazine","1.07739533891851"
+"A6","Gabazine","2.14879536152797"
+"A7","Gabazine","0.768554325894222"
+"A8","Gabazine","1.38582222222222"
+"B5","KainicAcid","0.259723401360546"
+"B6","KainicAcid","0.242016833758142"
 "B7","KainicAcid","0.848408845947397"
-"B8","KainicAcid","0.369896550026377"
-"C5","Control","0.916326947828802"
-"C6","Control","1.83467857142857"
-"C7","Control","1.00045463784604"
-"C8","Control","1.93760782608696"
-"D5","GABA","0.236309819193325"
+"B8","KainicAcid","0.369927047652541"
+"C5","Control","0.916327022805372"
+"C6","Control","1.83365937230769"
+"C7","Control","0.999850094732852"
+"C8","Control","1.93662174957118"
+"D5","GABA","0.236375555555557"
 "D6","GABA","0.226512478031632"
 "D7","GABA","0.385032225063936"
-"D8","GABA","0.297478303030303"
+"D8","GABA","0.297155509309967"
 "E5","CNQX","0.153153333333333"
-"E6","CNQX","0.204711954674223"
-"E7","CNQX","0.266132374100722"
-"E8","CNQX","0.26484932932933"
+"E6","CNQX","0.204434156028371"
+"E7","CNQX","0.266222651593014"
+"E8","CNQX","0.264808884442222"
 "F5","D-AP5","0.204523636363632"
 "F6","D-AP5","0.195509902912615"
 "F7","D-AP5","0.177363888888883"
-"F8","D-AP5","0.26466666666668"
+"F8","D-AP5","NaN"

Data/hPSC_MEA3_Pharmacology/hPSC_MEA3Pharma_DIV29/hPSC_MEA3Pharma_DIV29_meaRtools_output/hPSC_120618_MEA3Pharma_mean_freq_in_burst.csv

@@ -1,25 +1,25 @@
 "well","treatment","divDIV29"
-"A5","Gabazine","43.7549327822627"
-"A6","Gabazine","48.845894954307"
-"A7","Gabazine","39.6040516480297"
-"A8","Gabazine","40.3051231446659"
-"B5","KainicAcid","34.7726714856883"
-"B6","KainicAcid","32.322791735817"
-"B7","KainicAcid","40.871355215451"
-"B8","KainicAcid","36.9802992061434"
-"C5","Control","39.3466871075305"
-"C6","Control","38.0211079163924"
-"C7","Control","37.3450133049472"
-"C8","Control","36.6885061964868"
-"D5","GABA","40.0508938713628"
+"A5","Gabazine","44.3638210156438"
+"A6","Gabazine","48.8587205470956"
+"A7","Gabazine","39.608283561577"
+"A8","Gabazine","40.7933044658256"
+"B5","KainicAcid","34.7752378243235"
+"B6","KainicAcid","32.3178993261638"
+"B7","KainicAcid","40.8727735463824"
+"B8","KainicAcid","36.9820980067301"
+"C5","Control","39.357947103032"
+"C6","Control","38.03000534081"
+"C7","Control","37.3445634048098"
+"C8","Control","36.6827426042258"
+"D5","GABA","40.0499297466227"
 "D6","GABA","36.3278987999715"
-"D7","GABA","30.5344736185787"
-"D8","GABA","35.6772075525788"
+"D7","GABA","30.538121984382"
+"D8","GABA","35.6259204187253"
 "E5","CNQX","41.6883882087975"
-"E6","CNQX","39.4060734822531"
-"E7","CNQX","38.6002673288378"
-"E8","CNQX","36.2591716959158"
+"E6","CNQX","39.4502103271331"
+"E7","CNQX","38.6008654207128"
+"E8","CNQX","36.2591138803556"
 "F5","D-AP5","26.4706385677646"
 "F6","D-AP5","34.9490439054311"
 "F7","D-AP5","39.6134853061268"
-"F8","D-AP5","23.7194338949244"
+"F8","D-AP5","NaN"

Data/hPSC_MEA3_Pharmacology/hPSC_MEA3Pharma_DIV29/hPSC_MEA3Pharma_DIV29_meaRtools_output/hPSC_120618_MEA3Pharma_mean_spikes_in_burst.csv

@@ -1,25 +1,25 @@
 "well","treatment","divDIV29"
-"A5","Gabazine","69.519"
-"A6","Gabazine","123.675"
-"A7","Gabazine","39.103"
-"A8","Gabazine","75.227"
-"B5","KainicAcid","7.847"
-"B6","KainicAcid","6.965"
-"B7","KainicAcid","33.57"
-"B8","KainicAcid","12.125"
-"C5","Control","51.704"
-"C6","Control","71.303"
-"C7","Control","45.042"
-"C8","Control","71.667"
-"D5","GABA","8.947"
+"A5","Gabazine","66.231"
+"A6","Gabazine","123.709"
+"A7","Gabazine","39.127"
+"A8","Gabazine","70.749"
+"B5","KainicAcid","7.848"
+"B6","KainicAcid","6.966"
+"B7","KainicAcid","33.571"
+"B8","KainicAcid","12.127"
+"C5","Control","51.715"
+"C6","Control","71.29"
+"C7","Control","45.025"
+"C8","Control","71.646"
+"D5","GABA","8.951"
 "D6","GABA","7.042"
-"D7","GABA","11.731"
-"D8","GABA","9.448"
+"D7","GABA","11.742"
+"D8","GABA","9.428"
 "E5","CNQX","5.222"
-"E6","CNQX","6.836"
-"E7","CNQX","9.028"
-"E8","CNQX","8.411"
+"E6","CNQX","6.843"
+"E7","CNQX","9.03"
+"E8","CNQX","8.41"
 "F5","D-AP5","5.091"
 "F6","D-AP5","6.155"
 "F7","D-AP5","5.722"
-"F8","D-AP5","6.333"
+"F8","D-AP5","NaN"

Data/hPSC_MEA3_Pharmacology/hPSC_MEA3Pharma_DIV29/hPSC_MEA3Pharma_DIV29_meaRtools_output/hPSC_120618_MEA3Pharma_meanfiringrate_by_active_electordes.csv

@@ -1,25 +1,25 @@
 "well","treatment","divDIV29"
-"A5","Gabazine","7.11030257798371"
-"A6","Gabazine","6.96108026481047"
-"A7","Gabazine","6.50615040210559"
-"A8","Gabazine","5.19989580761213"
-"B5","KainicAcid","3.53771828894229"
-"B6","KainicAcid","3.53605138853915"
-"B7","KainicAcid","4.93221938454037"
-"B8","KainicAcid","7.91159549261241"
-"C5","Control","7.6279955404117"
-"C6","Control","4.90412516732902"
-"C7","Control","5.49222846581376"
-"C8","Control","6.2803678266202"
-"D5","GABA","2.00562845590126"
-"D6","GABA","1.93633989395128"
-"D7","GABA","1.56025846544895"
-"D8","GABA","2.81532532672915"
-"E5","CNQX","1.11436922229169"
-"E6","CNQX","1.23513045769478"
-"E7","CNQX","2.20424426921494"
-"E8","CNQX","2.75942733707367"
-"F5","D-AP5","0.940345532553907"
-"F6","D-AP5","1.88483694559769"
-"F7","D-AP5","1.35647225883657"
-"F8","D-AP5","1.35360860942604"
+"A5","Gabazine","7.11228739669433"
+"A6","Gabazine","6.96289133516956"
+"A7","Gabazine","6.50802066089368"
+"A8","Gabazine","5.20177500134686"
+"B5","KainicAcid","3.53934817578981"
+"B6","KainicAcid","3.53748283345291"
+"B7","KainicAcid","4.93407522459018"
+"B8","KainicAcid","7.91333782700388"
+"C5","Control","7.62985341755736"
+"C6","Control","4.90596941044311"
+"C7","Control","5.49410788045319"
+"C8","Control","6.28199673305054"
+"D5","GABA","2.00701905619761"
+"D6","GABA","1.93805099990096"
+"D7","GABA","1.56172810546574"
+"D8","GABA","2.81699435582652"
+"E5","CNQX","1.11594436039309"
+"E6","CNQX","1.23632814094776"
+"E7","CNQX","2.20577392806962"
+"E8","CNQX","2.76069222655826"
+"F5","D-AP5","0.941927662663582"
+"F6","D-AP5","1.88633430728716"
+"F7","D-AP5","1.35767003378295"
+"F8","D-AP5","1.35506282861812"

Data/hPSC_MEA3_Pharmacology/hPSC_MEA3Pharma_DIV29/hPSC_MEA3Pharma_DIV29_meaRtools_output/hPSC_120618_MEA3Pharma_per_spikes_in_burst.csv

@@ -1,25 +1,25 @@
 "well","treatment","divDIV29"
-"A5","Gabazine","85.257"
-"A6","Gabazine","90.45"
-"A7","Gabazine","78.047"
-"A8","Gabazine","83.8"
-"B5","KainicAcid","41.412"
-"B6","KainicAcid","27.589"
-"B7","KainicAcid","58.711"
-"B8","KainicAcid","60.535"
-"C5","Control","80.371"
-"C6","Control","81.997"
-"C7","Control","75.102"
-"C8","Control","85.255"
-"D5","GABA","22.277"
-"D6","GABA","8.845"
-"D7","GABA","11.668"
-"D8","GABA","42.307"
-"E5","CNQX","0.781"
-"E6","CNQX","16.7"
-"E7","CNQX","36.906"
-"E8","CNQX","30.762"
-"F5","D-AP5","0.255"
-"F6","D-AP5","1.438"
-"F7","D-AP5","2.596"
-"F8","D-AP5","0.06"
+"A5","Gabazine","84.921"
+"A6","Gabazine","90.451"
+"A7","Gabazine","78.05"
+"A8","Gabazine","83.317"
+"B5","KainicAcid","41.397"
+"B6","KainicAcid","27.596"
+"B7","KainicAcid","58.691"
+"B8","KainicAcid","60.529"
+"C5","Control","80.368"
+"C6","Control","82.002"
+"C7","Control","75.104"
+"C8","Control","85.256"
+"D5","GABA","22.302"
+"D6","GABA","8.837"
+"D7","GABA","11.667"
+"D8","GABA","42.444"
+"E5","CNQX","0.78"
+"E6","CNQX","16.677"
+"E7","CNQX","36.887"
+"E8","CNQX","30.761"
+"F5","D-AP5","0.254"
+"F6","D-AP5","1.437"
+"F7","D-AP5","2.594"
+"F8","D-AP5","0"

Data/hPSC_MEA3_Pharmacology/hPSC_MEA3Pharma_DIV29/hPSC_MEA3Pharma_DIV29_spikes_noise_explogs/hPSC_120618_MEA3Pharma_DIV29_spikes.csv

@@ -1 +0,0 @@
-../../../../.git/annex/objects/77/fK/MD5-s39317979--8cd5d88be58be383c691d9c0592e3bba/MD5-s39317979--8cd5d88be58be383c691d9c0592e3bba

Data/hPSC_MEA3_Pharmacology/hPSC_MEA3Pharma_DIV29/hPSC_MEA3Pharma_DIV29_spikes_noise_explogs/hPSC_120618_MEA3Pharma_DIV29_spikes.csv

@@ -0,0 +1 @@
+/annex/objects/MD5-s39336289--0d3afb102f6f759f0cd01cfc47f0636f