2023_Blaschke_Stroke_tDCS_rsfMRI/scripts/toolbox/spm12/spm_imatrix.m

function P = spm_imatrix(M)
% Return the parameters for creating an affine transformation matrix
% FORMAT P = spm_imatrix(M)
% M   - Affine transformation matrix
% P   - Parameters (see spm_matrix for definitions)
%__________________________________________________________________________
%
% See also: spm_matrix.m
%__________________________________________________________________________
% Copyright (C) 1996-2011 Wellcome Trust Centre for Neuroimaging

% John Ashburner & Stefan Kiebel
% $Id: spm_imatrix.m 4414 2011-08-01 17:51:40Z guillaume $


%-Translations and Zooms
%--------------------------------------------------------------------------
R         = M(1:3,1:3);
C         = chol(R'*R);
P         = [M(1:3,4)' 0 0 0  diag(C)'  0 0 0];
if det(R)<0, P(7)=-P(7); end % Fix for -ve determinants

%-Shears
%--------------------------------------------------------------------------
C         = diag(diag(C))\C;
P(10:12)  = C([4 7 8]);
R0        = spm_matrix([0 0 0  0 0 0 P(7:12)]);
R0        = R0(1:3,1:3);
R1        = R/R0;

%-This just leaves rotations in matrix R1
%--------------------------------------------------------------------------
%[          c5*c6,           c5*s6, s5]
%[-s4*s5*c6-c4*s6, -s4*s5*s6+c4*c6, s4*c5]
%[-c4*s5*c6+s4*s6, -c4*s5*s6-s4*c6, c4*c5]

% There may be slight rounding errors making x>1 or x<-1.
rang      = @(x) min(max(x, -1), 1);

P(5)      = asin(rang(R1(1,3)));
if (abs(P(5))-pi/2)^2 < 1e-9
    P(4)  = 0;
    P(6)  = atan2(-rang(R1(2,1)), rang(-R1(3,1)/R1(1,3)));
else
    c     = cos(P(5));
    P(4)  = atan2(rang(R1(2,3)/c), rang(R1(3,3)/c));
    P(6)  = atan2(rang(R1(1,2)/c), rang(R1(1,1)/c));
end