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chaeusler
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studyforrest-ppa-analysis
DOI
10.12751/g-node.7is9s6
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studyforrest...
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sub-06
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run-6_audio-ppa-ind.feat
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feat3_stats

feat3_stats 4.0 KB
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  1. </pre><hr>Stats<br><pre>
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  2. 

  3. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/body.txt custom_timing_files/ev1.txt
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  5. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/bpart.txt custom_timing_files/ev2.txt
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  6. 

  7. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/fahead.txt custom_timing_files/ev3.txt
    8. 

  8. 

  9. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/furn.txt custom_timing_files/ev4.txt
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  10. 

  11. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/geo.txt custom_timing_files/ev5.txt
    12. 

  12. 

  13. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/groom.txt custom_timing_files/ev6.txt
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  14. 

  15. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/obj.txt custom_timing_files/ev7.txt
    16. 

  16. 

  17. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/se_new.txt custom_timing_files/ev8.txt
    18. 

  18. 

  19. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/se_old.txt custom_timing_files/ev9.txt
    20. 

  20. 

  21. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/sex_f.txt custom_timing_files/ev10.txt
    22. 

  22. 

  23. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/sex_m.txt custom_timing_files/ev11.txt
    24. 

  24. 

  25. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/vse_new.txt custom_timing_files/ev12.txt
    26. 

  26. 

  27. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/vse_old.txt custom_timing_files/ev13.txt
    28. 

  28. 

  29. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/vlo_ch.txt custom_timing_files/ev14.txt
    30. 

  30. 

  31. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/vpe_new.txt custom_timing_files/ev15.txt
    32. 

  32. 

  33. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/vpe_old.txt custom_timing_files/ev16.txt
    34. 

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  35. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/fg_ad_lrdiff.txt custom_timing_files/ev17.txt
    36. 

  36. 

  37. mkdir -p custom_timing_files ; /usr/share/fsl/5.0/bin/fslFixText /data/project/studyforrest_ppa/sub-06/onsets/aomovie/run-6/fg_ad_rms.txt custom_timing_files/ev18.txt
    38. 

  38. 

  39. paste -d  ' '  /data/project/studyforrest_ppa/inputs/phase1/sub006/BOLD/task001_run006/bold_dico_moco.txt > confoundevs.txt
    40. 

  40. 

  41. /usr/share/fsl/5.0/bin/feat_model design confoundevs.txt
    42. 

  42. 

  43. /usr/share/fsl/5.0/bin/film_gls --in=filtered_func_data --rn=stats --pd=design.mat --thr=1000.0 --sa --ms=5 --con=design.con  
    44. 

  44. Log directory is: stats
    45. 

  45. paradigm.getDesignMatrix().Nrows()=439
    46. 

  46. paradigm.getDesignMatrix().Ncols()=42
    47. 

  47. sizeTS=439
    48. 

  48. numTS=76975
    49. 

  49. Calculating residuals...
    50. 

  50. Completed
    51. 

  51. Estimating residual autocorrelation...
    52. 

  52. Calculating raw AutoCorrs... Completed
    53. 

  53. mode = 7863.94
    54. 

  54. sig = 4344
    55. 

  55. Spatially smoothing auto corr estimates
    56. 

  56. ...................
    57. 

  57. Completed
    58. 

  58. Tukey M = 20
    59. 

  59. Tukey estimates... Completed
    60. 

  60. Completed
    61. 

  61. Prewhitening and Computing PEs...
    62. 

  62. Percentage done:
    63. 

  63. 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,71,72,73,74,75,76,77,78,79,80,81,82,83,84,85,86,87,88,89,90,91,92,93,94,95,96,97,98,99,Completed
    64. 

  64. Saving results... 
    65. 

  65. Completed
    66. 

  66. 

  67. /usr/share/fsl/5.0/bin/smoothest -d 397   -m mask -r stats/res4d > stats/smoothness
    68.