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- <HTML><HEAD>
- <!--refreshstart-->
- <!--refreshstop-->
- <link REL=stylesheet TYPE=text/css href=.files/fsl.css>
- <TITLE>FSL</TITLE></HEAD><BODY><OBJECT data=report.html></OBJECT>
- <h2>Progress Report / Log</h2>
- Started at Thu 19 Mar 2020 06:58:04 AM CET<p>
- Feat main script<br><pre>
- /bin/cp /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.fsf design.fsf
- /usr/share/fsl/5.0/bin/feat_model design
- mkdir .files;cp /usr/share/fsl/5.0/doc/fsl.css .files;cp -r /usr/share/fsl/5.0/doc/images .files/images
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat2_pre /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat -gfeatprep
- 2142
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 2142 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope1.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope1.feat -I 1 -flame1
- 9402
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 9402 -t ./.flame
- 12967
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 12967 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope1.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope1.feat -flame3
- 16586
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 16586 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope1.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope1.feat -poststats 1
- 16979
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 16979 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope1.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope1.feat -stop
- 21168
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 2142 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope2.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope2.feat -I 2 -flame1
- 23525
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 23525 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 27037 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope2.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope2.feat -flame3
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 31323 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope2.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope2.feat -poststats 1
- 32421
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 32421 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope2.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope2.feat -stop
- 5154
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 2142 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope3.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope3.feat -I 3 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 7564 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 10229 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope3.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope3.feat -flame3
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 14128 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope3.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope3.feat -poststats 1
- 15186
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 15186 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope3.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope3.feat -stop
- 21097
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 2142 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope4.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope4.feat -I 4 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 23412 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 25099 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope4.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope4.feat -flame3
- 29993
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 29993 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope4.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope4.feat -poststats 1
- 30888
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 30888 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope4.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope4.feat -stop
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 2142 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope5.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope5.feat -I 5 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 6397 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 7824 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope5.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope5.feat -flame3
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 12775 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope5.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope5.feat -poststats 1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 13714 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope5.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope5.feat -stop
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 2142 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope6.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope6.feat -I 6 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 21181 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 22791 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope6.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope6.feat -flame3
- 28316
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 28316 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope6.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope6.feat -poststats 1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 29097 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope6.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope6.feat -stop
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 2142 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope7.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope7.feat -I 7 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 3917 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 5474 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope7.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope7.feat -flame3
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 11841 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope7.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope7.feat -poststats 1
- 12638
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 12638 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope7.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope7.feat -stop
- 18288
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 2142 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope8.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope8.feat -I 8 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 19142 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 20853 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope8.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope8.feat -flame3
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 26750 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope8.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope8.feat -poststats 1
- 27655
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 27655 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope8.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope8.feat -stop
- 700
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 2142 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope9.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope9.feat -I 9 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 1612 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 3529 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope9.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope9.feat -flame3
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 9580 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope9.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope9.feat -poststats 1
- 10891
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 10891 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope9.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope9.feat -stop
- 16040
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 2142 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope10.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope10.feat -I 10 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 17043 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 18966 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope10.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope10.feat -flame3
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- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 24746 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope10.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope10.feat -stop
- 28450
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 21168,5154,21097,4921,20085,3037,18288,700,16040,28450 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat/cope10.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-ind.gfeat -stop
- </pre><hr>Higher-level input files preparation<br><pre>
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_Ax4dFn -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_9jjKkW -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_HS0hoe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_iB9Wyr -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_YcVUvC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_aiIkKO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_VhhYcU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_K9aub9 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_tv2qvk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_jvG8Kz -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_wkm7WL -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_ih1PZX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_TIpGd2 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_joGMqe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_FegiLt -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_LCDiYF -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_i40nCV -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_V69985 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_lVu399 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_moaUZm -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_YdxKjB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_5WfD1Q -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_br14M6 -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_3q3Cnd -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_L1X5VI -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_NuYOxc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_ERN0td -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_uIXcss -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_PaS1UE -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_1kKSRQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_hWMAg5 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_WElu8k -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_gA7Ohm -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_8591uA -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_sMjHFQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_dWD042 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_vjhm9g -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_Rurfmm -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_TNWPOw -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_ub4RrJ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_owmFFZ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_dZmjGa -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_JWNgNq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_fmAXTu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_ZeWgsF -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_CtoIPU -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_OlGPaf -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_stTSPA -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_YHtKg4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_TlrGog -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_wyi4Qr -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_D5Ulhw -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_V9QZ3L -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_XdkH9W -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_NEz0Gc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_fDq4yp -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_BI0POA -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_uufhaH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_ODY9cX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_KdEcN8 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_khhNSm -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_kJVvzD -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_qaL9jH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_6QRVKS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_ADgD66 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_3Hqm5j -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_okEtbz -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_zxAEiI -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_POyVgQ -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_kkoPh7 -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_Jrg9VA -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_BnQQhY -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_odCNvb -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_ysQpyn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_IdudBB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_xn1g7M -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_kX9K2Q -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_rcxCK7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_ecM40j -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_tg5fXu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_y9eDkK -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_ofx02O -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_Ze0Op3 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_ApAQVf -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_i1qSZr -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_0GZDQE -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_vJiahQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_FTNDbU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_GUkox8 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_uOyBGo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_1HWshB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_bDW7eQ -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_pZwVGW -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_aLDRUo -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_mCGGaT -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_p7NNS4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_UJTcCa -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_Ux8Xsn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_vBIPdC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_9voigP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_NGpc54 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_DnjHU8 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_YFkLwk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_3UPZwy -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_BPleMO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_Tfi900 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_wpdwKd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_Yefw5f -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_k0gEwt -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_3pVfwF -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_p6PuHV -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_5lJ9W6 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_Lu2Nya -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_uLVC7p -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_D4v88A -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_TkR1rW -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_jYmsfi -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_xj8R9H -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_e4q0wX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_bynFHa -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_CqYwdl -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_7YY9jq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_7Tl9jB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_Bo6RXR -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_sTagf4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_HigbPe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_OdQuKu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_cmsqBz -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_Yl9bKN -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_Wk9mQZ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_cS4vob -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_140a5n -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_3XMhxs -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_kLoGNG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_VZc15S -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_wvD8x9 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_4x7Wwn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_UOpTqC -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_C5oeLL -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_EFYulc -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_iMLmKG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_xsLoxG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_o07FsX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_3SSKDb -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_RuheUk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_53wZ5z -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_LG7q2A -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_FxNBwQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_b0vEN1 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_81ilYd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_fXQxMu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_PfOycG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_CMMIhK -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_bPd8wW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_heBNGb -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_CNMDqo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_vBg4Iz -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_njE8aO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_IN1dcQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_6IVXo5 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_iWmzlk -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_kE09AA -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_fsHx0V -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_31SEXp -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_0ingQB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_ztkM0O -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_FIbSRT -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_eAshu4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_F9oeCh -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_bEhchx -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_qtYcWL -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_zFSPHW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_DebPo5 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_os2opj -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_dAERou -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_L1C7JK -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_72WDLX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_lMVh30 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_GTVCnc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_zNQWAo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_8kR7lE -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_rIAxzQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_4Qsop5 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_nPkim9 -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg/standard bg_image
- /usr/share/fsl/5.0/bin/fslmerge -t mask /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/mask
- mkdir -p inputreg
- /usr/share/fsl/5.0/bin/fslmaths ../mask -mul 8 -Tmean masksum -odt short
- /usr/share/fsl/5.0/bin/fslmaths masksum -thr 8 -add masksum masksum
- /usr/share/fsl/5.0/bin/overlay 0 0 -c ../bg_image -a masksum 0.9 16 masksum_overlay
- /usr/share/fsl/5.0/bin/slicer masksum_overlay -S 2 750 masksum_overlay.png
- /usr/share/fsl/5.0/bin/fslmaths masksum -mul 0 maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/mask -mul -1 -add 1 -mul 1 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/mask -mul -1 -add 1 -mul 2 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/mask -mul -1 -add 1 -mul 3 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/mask -mul -1 -add 1 -mul 4 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/mask -mul -1 -add 1 -mul 5 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/mask -mul -1 -add 1 -mul 6 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/mask -mul -1 -add 1 -mul 7 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/mask -mul -1 -add 1 -mul 8 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths masksum -thr 7 -uthr 7 -bin -mul maskunique maskunique
- /usr/share/fsl/5.0/bin/overlay 0 0 ../bg_image -a maskunique 0.9 8 maskunique_overlay
- /usr/share/fsl/5.0/bin/slicer maskunique_overlay -S 2 750 maskunique_overlay.png
- /bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif
- /usr/share/fsl/5.0/bin/fslmaths mask -Tmin mask
- /usr/share/fsl/5.0/bin/fslmerge -t mean_func /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/mean_func
- /usr/share/fsl/5.0/bin/fslmaths mean_func -Tmean mean_func
- /usr/share/fsl/5.0/bin/fslmerge -t cope1 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope1
- /usr/share/fsl/5.0/bin/fslmaths cope1 -mas mask cope1
- printf '0.05547516375 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope1 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/varcope1
- /usr/share/fsl/5.0/bin/fslmaths varcope1 -mas mask varcope1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope1 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope1 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope1 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope1 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope1 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope1 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope1 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope1 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t1 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths tdof_t1 -mas mask tdof_t1
- /usr/share/fsl/5.0/bin/fslmerge -t cope2 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope2
- /usr/share/fsl/5.0/bin/fslmaths cope2 -mas mask cope2
- printf '0.037094789999999996 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope2 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/varcope2
- /usr/share/fsl/5.0/bin/fslmaths varcope2 -mas mask varcope2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope2 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope2 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope2 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope2 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope2 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope2 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope2 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope2 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t2 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths tdof_t2 -mas mask tdof_t2
- /usr/share/fsl/5.0/bin/fslmerge -t cope3 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope3
- /usr/share/fsl/5.0/bin/fslmaths cope3 -mas mask cope3
- printf '0.04445256 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope3 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/varcope3
- /usr/share/fsl/5.0/bin/fslmaths varcope3 -mas mask varcope3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope3 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope3 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope3 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope3 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope3 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope3 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope3 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope3 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t3 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths tdof_t3 -mas mask tdof_t3
- /usr/share/fsl/5.0/bin/fslmerge -t cope4 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope4
- /usr/share/fsl/5.0/bin/fslmaths cope4 -mas mask cope4
- printf '0.02846807 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope4 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/varcope4
- /usr/share/fsl/5.0/bin/fslmaths varcope4 -mas mask varcope4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope4 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope4 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope4 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope4 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope4 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope4 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope4 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope4 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t4 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths tdof_t4 -mas mask tdof_t4
- /usr/share/fsl/5.0/bin/fslmerge -t cope5 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope5
- /usr/share/fsl/5.0/bin/fslmaths cope5 -mas mask cope5
- printf '0.038514848750000004 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope5 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/varcope5
- /usr/share/fsl/5.0/bin/fslmaths varcope5 -mas mask varcope5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope5 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope5 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope5 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope5 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope5 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope5 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope5 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope5 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t5 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths tdof_t5 -mas mask tdof_t5
- /usr/share/fsl/5.0/bin/fslmerge -t cope6 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope6
- /usr/share/fsl/5.0/bin/fslmaths cope6 -mas mask cope6
- printf '0.047357185 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope6 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/varcope6
- /usr/share/fsl/5.0/bin/fslmaths varcope6 -mas mask varcope6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope6 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope6 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope6 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope6 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope6 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope6 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope6 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope6 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t6 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths tdof_t6 -mas mask tdof_t6
- /usr/share/fsl/5.0/bin/fslmerge -t cope7 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope7
- /usr/share/fsl/5.0/bin/fslmaths cope7 -mas mask cope7
- printf '0.045573725 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope7 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/varcope7
- /usr/share/fsl/5.0/bin/fslmaths varcope7 -mas mask varcope7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope7 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope7 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope7 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope7 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope7 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope7 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope7 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope7 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t7 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths tdof_t7 -mas mask tdof_t7
- /usr/share/fsl/5.0/bin/fslmerge -t cope8 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope8
- /usr/share/fsl/5.0/bin/fslmaths cope8 -mas mask cope8
- printf '0.026734195 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope8 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/varcope8
- /usr/share/fsl/5.0/bin/fslmaths varcope8 -mas mask varcope8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope8 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope8 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope8 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope8 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope8 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope8 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope8 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope8 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t8 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths tdof_t8 -mas mask tdof_t8
- /usr/share/fsl/5.0/bin/fslmerge -t cope9 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope9
- /usr/share/fsl/5.0/bin/fslmaths cope9 -mas mask cope9
- printf '0.02645030375 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope9 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/varcope9
- /usr/share/fsl/5.0/bin/fslmaths varcope9 -mas mask varcope9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope9 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope9 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope9 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope9 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope9 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope9 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope9 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope9 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t9 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths tdof_t9 -mas mask tdof_t9
- /usr/share/fsl/5.0/bin/fslmerge -t cope10 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope10
- /usr/share/fsl/5.0/bin/fslmaths cope10 -mas mask cope10
- printf '0.09027827249999999 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope10 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/varcope10
- /usr/share/fsl/5.0/bin/fslmaths varcope10 -mas mask varcope10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/cope10 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/cope10 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/cope10 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/cope10 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/cope10 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/cope10 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/cope10 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/cope10 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t10 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-ind.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths tdof_t10 -mas mask tdof_t10
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