feat4_post 872 B

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  1. </pre><hr>Post-stats<br><pre>
  2. /usr/share/fsl/5.0/bin/fslmaths stats/zstat1 -mas mask thresh_zstat1
  3. echo 95556 > thresh_zstat1.vol
  4. zstat1: DLH=0.287691 VOLUME=95556 RESELS=17.5263
  5. /usr/share/fsl/5.0/bin/cluster -i thresh_zstat1 -c stats/cope1 -t 2.3 -p 0.05 -d 0.287691 --volume=95556 --othresh=thresh_zstat1 -o cluster_mask_zstat1 --connectivity=26 --mm --olmax=lmax_zstat1_std.txt --scalarname=Z > cluster_zstat1_std.txt
  6. /usr/share/fsl/5.0/bin/cluster2html . cluster_zstat1 -std
  7. /usr/share/fsl/5.0/bin/fslstats thresh_zstat1 -l 0.0001 -R 2>/dev/null
  8. 2.300515 4.560116
  9. Rendering using zmin=2.300515 zmax=4.560116
  10. /usr/share/fsl/5.0/bin/overlay 1 0 example_func -a thresh_zstat1 2.300515 4.560116 rendered_thresh_zstat1
  11. /usr/share/fsl/5.0/bin/slicer rendered_thresh_zstat1 -S 2 750 rendered_thresh_zstat1.png
  12. /bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif