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- <HTML><HEAD>
- <!--refreshstart-->
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- <link REL=stylesheet TYPE=text/css href=.files/fsl.css>
- <TITLE>FSL</TITLE></HEAD><BODY><OBJECT data=report.html></OBJECT>
- <h2>Progress Report / Log</h2>
- Started at Sat 14 Mar 2020 12:59:48 AM CET<p>
- Feat main script<br><pre>
- /bin/cp /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.fsf design.fsf
- /usr/share/fsl/5.0/bin/feat_model design
- mkdir .files;cp /usr/share/fsl/5.0/doc/fsl.css .files;cp -r /usr/share/fsl/5.0/doc/images .files/images
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat2_pre /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat -gfeatprep
- 28975
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 28975 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope1.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope1.feat -I 1 -flame1
- 15260
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 15260 -t ./.flame
- 16948
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 16948 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope1.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope1.feat -flame3
- 19684
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 19684 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope1.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope1.feat -poststats 1
- 20227
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 20227 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope1.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope1.feat -stop
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 28975 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope2.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope2.feat -I 2 -flame1
- 26715
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 26715 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 28810 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope2.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope2.feat -flame3
- 32480
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 32480 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope2.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope2.feat -poststats 1
- 486
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 486 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope2.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope2.feat -stop
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 28975 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope3.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope3.feat -I 3 -flame1
- 6862
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 6862 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 8810 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope3.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope3.feat -flame3
- 13018
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 13018 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope3.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope3.feat -poststats 1
- 13550
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 13550 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope3.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope3.feat -stop
- 18027
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 28975 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope4.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope4.feat -I 4 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 19729 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 21766 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope4.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope4.feat -flame3
- 25831
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 25831 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope4.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope4.feat -poststats 1
- 26510
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 26510 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope4.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope4.feat -stop
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 28975 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope5.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope5.feat -I 5 -flame1
- 388
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 388 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 2224 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope5.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope5.feat -flame3
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 6376 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope5.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope5.feat -poststats 1
- 6965
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 6965 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope5.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope5.feat -stop
- 11622
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 28975 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope6.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope6.feat -I 6 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 13190 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 14863 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope6.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope6.feat -flame3
- 18912
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 18912 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope6.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope6.feat -poststats 1
- 19587
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 19587 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope6.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope6.feat -stop
- 23986
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 28975 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope7.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope7.feat -I 7 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 25200 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 27469 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope7.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope7.feat -flame3
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 31624 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope7.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope7.feat -poststats 1
- 32260
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 32260 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope7.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope7.feat -stop
- 4065
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 28975 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope8.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope8.feat -I 8 -flame1
- 5222
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 5222 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 7587 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope8.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope8.feat -flame3
- 20108
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 20108 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope8.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope8.feat -poststats 1
- 20991
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 20991 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope8.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope8.feat -stop
- 26658
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 28975 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope9.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope9.feat -I 9 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 28421 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 31265 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope9.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope9.feat -flame3
- 5078
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 5078 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope9.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope9.feat -poststats 1
- 6000
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 6000 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope9.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope9.feat -stop
- 11764
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 28975 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope10.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope10.feat -I 10 -flame1
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3b_flame -j 13708 -t ./.flame
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- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 16397 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope10.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope10.feat -flame3
- 22250
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 22250 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope10.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope10.feat -poststats 1
- 23057
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 23057 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope10.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope10.feat -stop
- 26634
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 24843,5151,18027,31219,11622,23986,4065,26658,11764,26634 /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat/cope10.feat/design.fsf -D /data/project/studyforrest_ppa/sub-04/2nd-lvl_movie-ppa-grp.gfeat -stop
- </pre><hr>Higher-level input files preparation<br><pre>
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_Ww5qc7 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_u8CGsK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_QCsTbA --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_jnuNwV --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_BhPwNl --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_Lx0yAJ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_yYoS31 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_dND2mv --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_pWqeRM --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_6ySZJ9 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_9Yavjz --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_YaLvGT --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_LRmsmn --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_NMESrL --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_5o4Q40 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_KnxGDs --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_e1UdsW --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_OG4DRc --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_rjV0VC --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_Za0eCX --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_3vC7Eq --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_vXglFS --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_fyKaVd --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_CWRtJK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_StGVyA --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_gsg95k --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_kIo6kG --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_KGAZUa --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_xO55vo --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_xxna8N --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_muJddc --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_alQxpp --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_rHH6cT --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_ejwiCh --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_ZKYoUA --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_rudxc5 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_aXLDL3 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_W53q5P --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_KEk13k --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_vhGvj3 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_qatwLw --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_ePfhSP --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_TYX1Jd --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_TbJYdH --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_A24FfU --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_OX2c9l --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_LlqF0O --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_A9hfcz --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_pdmrXf --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_urXUZD --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_Oyzf4U --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_53rTAi --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_T52MGK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_tTRhEY --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_hNCYoo --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_7ActyU --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_VBOped --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_y7vOUB --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_1aouR9 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_rW3t2l --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_mGby1N --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_6s4IJ6 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_ue47xv --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_acPxcU --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_CFXpig --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_OImJWw --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_HSvE0S --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_ajJT5i --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_v4PzDF --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_l0HBc8 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_oGThsS --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_d3kZVI --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_9gO7L5 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_hCDMkr --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_S04GKU --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_tm08rj --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_R86RmD --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_mjkAM3 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_CEySws --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_N56gpJ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_LiqLud --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_8gQSSC --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_VQHoxP --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_7sdHKl --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_51wvwM --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_OIoRx3 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_EJnBsA --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_3J1fGM --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_V4KeTh --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_wGlEEL --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_zoJKwZ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_57sy9m --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_Vn1WxP --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_PTku2O --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_mTgjqB --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_RDC0K3 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_PZu0hi --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_21c4nO --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_c8gb13 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_7hX9vs --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_mZEKJZ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_CSCR6h --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_QN2mMF --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_HAOJk4 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_2vjNSk --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_cQdu8K --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_6PB0Ab --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_aCsBPo --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_SBJfzU --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_dn6h6k --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_YmFm4x --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_4ZeKBV --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_Igagro --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_XVKV7D --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_Nc7u96 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_iCDM6w --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_BiNOsv --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_SmSrR7 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_NSv4mx --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_d46x8J --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_rEJCIj --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_K956lF --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_57U99V --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_yOKaAq --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_IOMcgD --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_bOzS32 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_AaQQWq --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_vdGZoG --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_ZBiA72 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_sVrAOr --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_2aSWWN --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_jpK6hg --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_xdGMBL --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_5sr9EZ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_2fnxws --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_mmfJFN --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_H1YERa --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_Bv5iCv --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_DecCw2 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_ajfCjE --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_9TsgGk --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_GOkkUN --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_KSr3Cc --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_4iyLIq --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_QRD3zP --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_ESLCXg --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_LmOvhv --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_KruM0T --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_mKoPyc --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_BmHbjz --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_LHQbDY --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_4wTbVh --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_GEIHzG --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_cakc86 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_sCnkbr --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_7gxjMP --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_01ulVf --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_9q720v --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_5ytOuU --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_DWqDgk --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_g88nsD --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn
- /usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_Gzmkr1 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_hdgReD --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_EJyJcv --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_Yy7t1H --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_o6xPuc --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_gBC4hC --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_JIut3S --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_96TSun --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_kPlBRK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_awZl86 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_WlrRIv --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_DOZzHN --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_Lyf6xi --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_TKw0PG --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_O16AkZ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_q9Q2eo --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_3JGp5L --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_1ZjQa0 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_UpvVzt --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_7vFXxS --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_b1dWDc --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_7K5M7F --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear
- /usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_wMiZM1 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg/standard bg_image
- /usr/share/fsl/5.0/bin/fslmerge -t mask /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/mask
- mkdir -p inputreg
- /usr/share/fsl/5.0/bin/fslmaths ../mask -mul 8 -Tmean masksum -odt short
- /usr/share/fsl/5.0/bin/fslmaths masksum -thr 8 -add masksum masksum
- /usr/share/fsl/5.0/bin/overlay 0 0 -c ../bg_image -a masksum 0.9 16 masksum_overlay
- /usr/share/fsl/5.0/bin/slicer masksum_overlay -S 2 750 masksum_overlay.png
- /usr/share/fsl/5.0/bin/fslmaths masksum -mul 0 maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 1 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 2 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 3 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 4 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 5 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 6 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 7 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 8 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths masksum -thr 7 -uthr 7 -bin -mul maskunique maskunique
- /usr/share/fsl/5.0/bin/overlay 0 0 ../bg_image -a maskunique 0.9 8 maskunique_overlay
- /usr/share/fsl/5.0/bin/slicer maskunique_overlay -S 2 750 maskunique_overlay.png
- /bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif
- /usr/share/fsl/5.0/bin/fslmaths mask -Tmin mask
- /usr/share/fsl/5.0/bin/fslmerge -t mean_func /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/mean_func
- /usr/share/fsl/5.0/bin/fslmaths mean_func -Tmean mean_func
- /usr/share/fsl/5.0/bin/fslmerge -t cope1 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope1
- /usr/share/fsl/5.0/bin/fslmaths cope1 -mas mask cope1
- printf '0.05547516375 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope1 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/varcope1
- /usr/share/fsl/5.0/bin/fslmaths varcope1 -mas mask varcope1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t1 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t1
- /usr/share/fsl/5.0/bin/fslmaths tdof_t1 -mas mask tdof_t1
- /usr/share/fsl/5.0/bin/fslmerge -t cope2 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope2
- /usr/share/fsl/5.0/bin/fslmaths cope2 -mas mask cope2
- printf '0.037094789999999996 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope2 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/varcope2
- /usr/share/fsl/5.0/bin/fslmaths varcope2 -mas mask varcope2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t2 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t2
- /usr/share/fsl/5.0/bin/fslmaths tdof_t2 -mas mask tdof_t2
- /usr/share/fsl/5.0/bin/fslmerge -t cope3 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope3
- /usr/share/fsl/5.0/bin/fslmaths cope3 -mas mask cope3
- printf '0.04445256 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope3 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/varcope3
- /usr/share/fsl/5.0/bin/fslmaths varcope3 -mas mask varcope3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t3 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t3
- /usr/share/fsl/5.0/bin/fslmaths tdof_t3 -mas mask tdof_t3
- /usr/share/fsl/5.0/bin/fslmerge -t cope4 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope4
- /usr/share/fsl/5.0/bin/fslmaths cope4 -mas mask cope4
- printf '0.02846807 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope4 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/varcope4
- /usr/share/fsl/5.0/bin/fslmaths varcope4 -mas mask varcope4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t4 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t4
- /usr/share/fsl/5.0/bin/fslmaths tdof_t4 -mas mask tdof_t4
- /usr/share/fsl/5.0/bin/fslmerge -t cope5 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope5
- /usr/share/fsl/5.0/bin/fslmaths cope5 -mas mask cope5
- printf '0.038514848750000004 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope5 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/varcope5
- /usr/share/fsl/5.0/bin/fslmaths varcope5 -mas mask varcope5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t5 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t5
- /usr/share/fsl/5.0/bin/fslmaths tdof_t5 -mas mask tdof_t5
- /usr/share/fsl/5.0/bin/fslmerge -t cope6 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope6
- /usr/share/fsl/5.0/bin/fslmaths cope6 -mas mask cope6
- printf '0.047357185 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope6 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/varcope6
- /usr/share/fsl/5.0/bin/fslmaths varcope6 -mas mask varcope6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t6 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t6
- /usr/share/fsl/5.0/bin/fslmaths tdof_t6 -mas mask tdof_t6
- /usr/share/fsl/5.0/bin/fslmerge -t cope7 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope7
- /usr/share/fsl/5.0/bin/fslmaths cope7 -mas mask cope7
- printf '0.045573725 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope7 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/varcope7
- /usr/share/fsl/5.0/bin/fslmaths varcope7 -mas mask varcope7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t7 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t7
- /usr/share/fsl/5.0/bin/fslmaths tdof_t7 -mas mask tdof_t7
- /usr/share/fsl/5.0/bin/fslmerge -t cope8 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope8
- /usr/share/fsl/5.0/bin/fslmaths cope8 -mas mask cope8
- printf '0.026734195 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope8 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/varcope8
- /usr/share/fsl/5.0/bin/fslmaths varcope8 -mas mask varcope8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t8 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t8
- /usr/share/fsl/5.0/bin/fslmaths tdof_t8 -mas mask tdof_t8
- /usr/share/fsl/5.0/bin/fslmerge -t cope9 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope9
- /usr/share/fsl/5.0/bin/fslmaths cope9 -mas mask cope9
- printf '0.02645030375 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope9 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/varcope9
- /usr/share/fsl/5.0/bin/fslmaths varcope9 -mas mask varcope9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t9 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t9
- /usr/share/fsl/5.0/bin/fslmaths tdof_t9 -mas mask tdof_t9
- /usr/share/fsl/5.0/bin/fslmerge -t cope10 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope10
- /usr/share/fsl/5.0/bin/fslmaths cope10 -mas mask cope10
- printf '0.09027827249999999 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope10 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/varcope10
- /usr/share/fsl/5.0/bin/fslmaths varcope10 -mas mask varcope10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 417 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 407 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 404 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 454 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 428 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 405 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 508 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 304 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmerge -t tdof_t10 /data/project/studyforrest_ppa/sub-04/run-1_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-2_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-3_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-4_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-5_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-6_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-7_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-04/run-8_movie-ppa-grp.feat/reg_standard/stats/FEtdof_t10
- /usr/share/fsl/5.0/bin/fslmaths tdof_t10 -mas mask tdof_t10
- </pre><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br></BODY></HTML>
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