Scheduled service maintenance on November 22

On Friday, November 22, 2024, between 06:00 CET and 18:00 CET, GIN services will undergo planned maintenance. Extended service interruptions should be expected. We will try to keep downtimes to a minimum, but recommend that users avoid critical tasks, large data uploads, or DOI requests during this time.

We apologize for any inconvenience.

Konstantin Willeke 9dae64a935 fix typo in decoding readme.		il y a 2 ans
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Ellipse_25830-5-10.h5	cf669e3eeb upload all decoding scans	il y a 2 ans
Ellipse_25891-7-7.h5	c5617af6f2 Upload files to 'decoding scans'	il y a 2 ans
Ellipse_26872-20-10.h5	cf669e3eeb upload all decoding scans	il y a 2 ans
Objects_22904_3_9.h5	cf669e3eeb upload all decoding scans	il y a 2 ans
Objects_22904_4_5.h5	cf669e3eeb upload all decoding scans	il y a 2 ans
Objects_25830_6_5.h5	cf669e3eeb upload all decoding scans	il y a 2 ans
Objects_25830_6_6.h5	cf669e3eeb upload all decoding scans	il y a 2 ans
Objects_25891_12_10.h5	cf669e3eeb upload all decoding scans	il y a 2 ans
Objects_25891_12_11.h5	cf669e3eeb upload all decoding scans	il y a 2 ans
Objects_27802_8_17.h5	cf669e3eeb upload all decoding scans	il y a 2 ans
README.md	9dae64a935 fix typo in decoding readme.	il y a 2 ans

Dataset Structure

The decoding scans are provided as .h5 files. There are two types of decoding scans:

Objects: For the object discrimation task
Ellipse: For the detection task

The following attributes are present in each individual dataset:

pupil_trials: mean pupil size for each trial
- shape:n_trials,
class_trials: image class for each trial
- shape:n_trials,
- for Object Discrimination (i.e. Objects scans): The class reflects the object identity as well as the color of the object:
  - object identity:
  - object color:
- for Detection (i.e. Ellipse scans):
  - image can either contain a dark ellipse in the uv or green channel, or no ellipse (noise trials)
activity_trials: mean activity per neuron for each trial
- shape:n_neurons x n_trials

datacite.yml
Title	State-dependent pupil dilation rapidly shifts visual feature representations
Authors	Franke,Katrin;Institute for Ophthalmic Research, Tuebingen University, Tuebingen, Germany. Willeke,Konstantin F.;Institute for Bioinformatics and Medical Informatics, Tuebingen University, Tuebingen, Germany Ponder,Kayla;Department of Neuroscience, Baylor College of Medicine, Houston, TX, US Galdamez,Mario;Department of Neuroscience, Baylor College of Medicine, Houston, TX, US Zhou,Na;Department of Neuroscience, Baylor College of Medicine, Houston, TX, US Muhammad,Taliah;Department of Neuroscience, Baylor College of Medicine, Houston, TX, US Patel,Saumil;Department of Neuroscience, Baylor College of Medicine, Houston, TX, US Froudarakis,Emmanouil;Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, Heraklion, Greece Reimer,Jacob;Department of Neuroscience, Baylor College of Medicine, Houston, TX, US Sinz,Fabian;Department of Computer Science, Goettingen University, Goettingen, Germany Tolias,Andreas;Department of Neuroscience, Baylor College of Medicine, Houston, TX, US
Description	Complete dataset for the article "State-dependent pupil dilation rapidly shifts visual feature representations".
License	CC-BY (http://creativecommons.org/licenses/by/4.0/)
References	Franke, K., Willeke, K.F., Ponder, K., Galdamez, M., Muhammad, T., Patel, S., Froudarakis, E., Reimer, J., Sinz, F., & Tolias, A.S. (2021). Behavioral state tunes mouse vision to ethological features through pupil dilation. bioRxiv. [doi:10.1101/2021.09.03.458870] (IsSupplementTo)
Funding	DFG, EXC 2064/1 IARPA, D16PC00003 NIH, R01 EY026927 NIH, T32-EY-002520-37 NSF, 1707400
Keywords	Neuroscience Systems Neuroscience Primary visual cortex Brain state Behavioral state Machine learning Deep neural networks
Resource Type	Dataset