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- import view
- # this tells view all settings including the folder structure of your project
- # On Windows, if you copy paths from the file explorer, make sure the string below is always of the form r"......"
- ymlfile = r""
- # any manual changes to flags, add to dictionary as required
- flags_to_update = {
- # Example:
- # "CTV_scalebar": True,
- # "x_gap": 30,
- # "y_gap": 30,
- # "mv_individualScale": 2,
- # .....
- }
- # list of animals for which movies are to generated
- animals = [
- "",
- ""
- ]
- if __name__ == '__main__':
- # create a view object
- view_obj = view.VIEW()
- # load flags from yml file
- view_obj.update_flags_from_ymlfile(ymlfile)
- # update flags specified locally
- view_obj.update_flags(flags_to_update)
- # iterate over animals
- for animal in animals:
- # initialize view object with animal
- view_obj.initialize_animal(animal=animal)
- # iterate over measurements of the animal
- for measu in view_obj.get_measus_for_current_animal(analyze_values_to_use=(1,)):
- # load a measurement for the animal
- view_obj.load_measurement_data_from_current_animal(measu)
- # calculate signals
- view_obj.calculate_signals()
- # save movie for the loaded data
- view_obj.export_movie_for_current_measurement()
- # backup this script and the yml file used next to the created GDMs
- view_obj.backup_script_flags_configs_for_movies(files=[__file__, ymlfile])
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