animal_outs.txt 1.7 KB

12345678910111213141516171819202122232425262728293031323334
  1. # List of inputs and outputs from @animal_warper
  2. AFNI package : linux_rocky_8
  3. AFNI version number : AFNI_24.2.01
  4. @animal_warper ver : 3.62
  5. List of main outputs (this file) : animal_outs.txt
  6. List of intermediate files : intermediate/guide_to_ints.txt
  7. Input dset (orig) : NMTv2asym.nii.gz
  8. Base dset (templ) : yerkes19_abox.nii.gz
  9. Base space : YERKES19
  10. Atlas dsets :
  11. Input dset center_out : native
  12. Alignment type : all (= nonlinear)
  13. Matrix, full aff xform (for AP) : NMTv2asym_composite_linear_to_template.1D
  14. Matrix, full aff xform, inv : NMTv2asym_composite_linear_to_template_inv.1D
  15. NL warp, aff2base (for AP) : NMTv2asym_shft_WARP.nii.gz
  16. NL warp, base2aff : NMTv2asym_shft_WARPINV.nii.gz
  17. Input in templ : NMTv2asym_warp2std.nii.gz
  18. Input in templ, no skull : NMTv2asym_warp2std_ns.nii.gz
  19. Input in templ, no skull, unifized : NMTv2asym_warp2std_nsu.nii.gz
  20. Mask of input : NMTv2asym_mask.nii.gz
  21. Input (orig), no skull : NMTv2asym_ns.nii.gz
  22. Input (orig), no skull, unifized : NMTv2asym_nsu.nii.gz
  23. Templ surf in orig : surfaces/Yerkes19_in_NMTv2asym.gii
  24. QC directory of images : QC/
  25. Info on atl/seg followers : QC/report_*.1D
  26. Scripts to view surfaces : surfaces/do*.tcsh
  27. Command : @animal_warper -ok_to_exist -base yerkes19_abox.nii.gz -base_abbrev Yerkes19 -input NMT_v2.1_asym_SS.nii.gz -input_abbrev NMTv2asym -outdir aw_NMTv2asym_to_Yerkes19 -supersize -cost nmi