config_dump_20_48_15.yaml 7.8 KB

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  1. !munch.Munch
  2. general: !munch.Munch {debug: 1, clear_trial_history: false}
  3. lfp: !munch.Munch
  4. fs: 1000
  5. sampling_ratio: 30
  6. filter_fc_lb: [10, 0]
  7. filter_fc_mb: [12, 40]
  8. filter_fc_hb: [60, 250]
  9. filter_order_lb: 2
  10. filter_order_mb: 6
  11. filter_order_hb: 10
  12. artifact_thr: 400
  13. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  14. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  15. array21: [0, 1]
  16. array22: []
  17. array1_exclude: []
  18. array2_exclude: []
  19. i_start: 0
  20. i_stop: -1
  21. psth_win: [-1000, 5000]
  22. exclude: false
  23. normalize: false
  24. zscore: false
  25. car: true
  26. sub_band: 1
  27. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  28. spectra: !munch.Munch {spgr_len: 500}
  29. plot: !munch.Munch
  30. ch_ids: [0]
  31. general: true
  32. filters: false
  33. array2: [0, 1]
  34. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  35. sim_data: !munch.Munch {rate_bl: 10}
  36. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  37. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-02-20,
  38. filename_data: /data/clinical/neural/fr/2020-02-20/data_20_48_15.bin, filename_baseline: /data/clinical/neural/fr/2020-02-20/bl_20_48_15.npy,
  39. filename_log_info: /data/clinical/neural/fr/2020-02-20/info_20_48_15.log, filename_log_debug: /data/clinical/neural/fr/2020-02-20/debug_20_48_15.log,
  40. filename_events: /data/clinical/neural/fr/2020-02-20/events_20_48_15.txt, filename_config: /data/clinical/neural/fr/2020-02-20/config_20_48_15.yaml,
  41. filename_paradigm: /data/clinical/neural/fr/2020-02-20/paradigm_20_48_15.yaml, filename_config_dump: /data/clinical/neural/fr/2020-02-20/config_dump_20_48_15.yaml,
  42. filename_git_patch: /data/clinical/neural/fr/2020-02-20/git_changes_20_48_15.patch,
  43. filename_history: /data/clinical/neural/fr/2020-02-20/history.bin, git_hash: 52c204f}
  44. plot: !munch.Munch
  45. fps: 10.0
  46. filter_min_rate: 2
  47. channels: [20, 24, 99]
  48. pca: false
  49. session: !munch.Munch
  50. flags: !munch.Munch {bl: true, bl_rand: true, stimulus: true, decode: false}
  51. recording: !munch.Munch
  52. timing: !munch.Munch {t_baseline_rand: 1.0, bci_loop_interval: 0.05, recording_loop_interval_data: 0.02,
  53. t_baseline_all: 1.0, recording_loop_interval: 0.05, t_response: 5.0, decoder_refresh_interval: 0.01,
  54. t_after_stimulus: 0.2, t_baseline_1: 5.0}
  55. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/colorspeller.yaml]
  56. speller: !munch.Munch {speller_matrix: true, audio_result_fb: false, type: color,
  57. pyttsx_rate: 100, audio: true}
  58. paradigms: !munch.Munch
  59. variablesToShowInGUI: !munch.Munch
  60. variableGroups: [timing, color]
  61. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  62. t: 1
  63. feedback: !munch.Munch
  64. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  65. number_of_stim: 10
  66. mode: [Training, Validation]
  67. play_end_feedback: !munch.Munch {success: true, fail: true}
  68. audio_path: /kiap/data/speller/feedback/
  69. selected_mode: 0
  70. symmetrical: true
  71. states: !munch.Munch
  72. up: [1.0, 0.7, 1.0]
  73. down: [0.0, 0.0, 0.3]
  74. exploration: !munch.Munch
  75. mode: [Screening]
  76. selected_mode: 0
  77. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  78. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  79. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  80. audio_path: /kiap/data/speller/Audio/exploration
  81. number_of_stim: 5
  82. color: !munch.Munch
  83. n_repeat_unclassified: 1
  84. validation_string: ''
  85. max_length_vocabulary: 5
  86. word_prediction: false
  87. general_user_corpus: general_user_cfd.txt
  88. confirmation_methods: [single, double_yes, best_of_three]
  89. init_string: ''
  90. mode: [Validation, Free]
  91. selected_confirmation_method: 0
  92. selected_mode: 1
  93. audio_path: /kiap/data/speller/Audio
  94. speller_user_corpus: speller_user.txt
  95. corpora_path: /kiap/data/speller/Corpora
  96. general_corpus: cfd_tiger.p
  97. states:
  98. - - gelb
  99. - [E, A, D, C, B, F, ^]
  100. - - gruen
  101. - [N, S, R, O, M, P, Q, ^]
  102. - - rot
  103. - [I, H, L, G, K, J, ^]
  104. - - blau
  105. - [T, U, W, Z, V, Y, X, ^]
  106. - - weiss
  107. - [<, ' ', end, ^]
  108. question: !munch.Munch
  109. mode: [Training, Validation, Free]
  110. selected_mode: 2
  111. audio_path: /kiap/data/speller/Audio/question
  112. number_of_stim: 10
  113. symmetrical: true
  114. training_color: !munch.Munch
  115. mode: [Training]
  116. selected_mode: 0
  117. states:
  118. - - gelb
  119. - [E, A, D, C, B, F, ^]
  120. - - gruen
  121. - [N, S, R, O, M, P, Q, ^]
  122. - - rot
  123. - [I, H, L, G, K, J, ^]
  124. - - blau
  125. - [T, U, W, Z, V, Y, X, ^]
  126. - - weiss
  127. - [<, ' ', '?', word, end, ^]
  128. training_string: Gustav
  129. confirmation_yes: 1
  130. confirmation_no: 1
  131. feedback: !munch.Munch {beta: 120, feedback_tone: true, target_tone_length: 1.0, hold_iterations: 2,
  132. alpha: 360, tone_length: 0.25, target_n_tones: 5}
  133. system: !munch.Munch {plot: 0}
  134. daq: !munch.Munch
  135. daq_sleep: 0.1
  136. normalization: !munch.Munch
  137. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  138. update_interval: 10.0
  139. len: 600.0
  140. range: [10, 90]
  141. channels:
  142. - !munch.Munch {id: 21, bottom: 6.0, top: 11.0, invert: false}
  143. use_all_channels: false
  144. clamp_firing_rates: true
  145. do_update: false
  146. trigger_len: 50
  147. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  148. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  149. data_source: spike_rates
  150. exclude_channels: []
  151. n_channels_max: 128
  152. spike_band_power: !munch.Munch
  153. integrated_samples: 1500
  154. average_n_bins: 10
  155. sample_group: 6
  156. filter: !munch.Munch
  157. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  158. a: [1, -1.91119706742607, 0.914975834801434]
  159. loop_interval: 50
  160. car_channels: []
  161. fs: 30000.0
  162. smpl_fct: 30
  163. n_channels: 128
  164. buffer: !munch.Munch
  165. length: 600
  166. shape: [600, 128]
  167. classifier: !munch.Munch
  168. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  169. trigger_pos: start
  170. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  171. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  172. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  173. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  174. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  175. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  176. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  177. thr_prob: 0.8
  178. exclude_data_channels: []
  179. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  180. n_triggers: 2
  181. online: false
  182. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  183. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  184. break_loop: true
  185. n_neg_train: 100000
  186. max_active_ch_nr: []
  187. thr_window: 40
  188. include_channels: [20]
  189. n_classes: 2
  190. deadtime: 40
  191. psth: !munch.Munch
  192. cut: [-40, 100]
  193. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  194. args:
  195. - !!python/name:numpy.ndarray ''
  196. - !!python/tuple [0]
  197. - !!binary |
  198. Yg==
  199. state: !!python/tuple
  200. - 1
  201. - !!python/tuple [8]
  202. - !!python/object/apply:numpy.dtype
  203. args: [i8, 0, 1]
  204. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  205. - false
  206. - !!binary |
  207. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  208. AAAAAAAAAA==
  209. saved_model_conf_name: config/model_conf.yaml
  210. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  211. n_features: 1024