config_dump_17_49_26.yaml 8.0 KB

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  1. !munch.Munch
  2. paradigms: !munch.Munch
  3. training_color: !munch.Munch
  4. mode: [Training]
  5. selected_mode: 0
  6. states:
  7. - - gelb
  8. - [E, A, D, C, B, F, ^]
  9. - - gruen
  10. - [N, S, R, O, M, P, Q, ^]
  11. - - rot
  12. - [I, H, L, G, K, J, ^]
  13. - - blau
  14. - [T, U, W, Z, V, Y, X, ^]
  15. - - weiss
  16. - [<, <<<, ., '?', word, end, ^]
  17. training_string: Gustav
  18. confirmation_yes: 1
  19. confirmation_no: 1
  20. variablesToShowInGUI: !munch.Munch
  21. variableGroups: [timing, color]
  22. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  23. t: 1
  24. color: !munch.Munch
  25. mode: [Validation, Free]
  26. selected_mode: 1
  27. states:
  28. - - gelb
  29. - [E, A, D, C, B, F, ^]
  30. - - gruen
  31. - [N, S, R, O, M, P, Q, ^]
  32. - - rot
  33. - [I, H, L, G, K, J, ^]
  34. - - blau
  35. - [T, U, W, Z, V, Y, X, ^]
  36. - - weiss
  37. - [<, ' ', <<<, ., end, ^]
  38. max_length_vocabulary: 5
  39. confirmation_num_yes: 2
  40. confirmation_num_no: 1
  41. opposite_answers_methods: [last, majority]
  42. selected_opposite_answers_method: 0
  43. corpora_path: /kiap/data/speller/Corpora
  44. audio_path: /kiap/data/speller/Audio
  45. general_corpus: cfd_leipzig.p
  46. general_user_corpus: general_user_cfd.txt
  47. speller_user_corpus: speller_user.txt
  48. word_prediction: true
  49. validation_string: ''
  50. init_string: ''
  51. n_repeat_unclassified: 1
  52. question: !munch.Munch
  53. mode: [Training, Validation, Free]
  54. selected_mode: 1
  55. audio_path: /kiap/data/speller/Audio/question
  56. number_of_stim: 10
  57. symmetrical: true
  58. feedback: !munch.Munch
  59. audio_path: /kiap/data/speller/feedback/
  60. states: !munch.Munch
  61. up: [1.0, 0.7, 1.0]
  62. down: [0.0, 0.0, 0.3]
  63. selected_mode: 0
  64. mode: [Training, Validation]
  65. play_end_feedback: !munch.Munch {fail: false, success: false}
  66. symmetrical: true
  67. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  68. number_of_stim: 10
  69. exploration: !munch.Munch
  70. mode: [Screening]
  71. selected_mode: 0
  72. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  73. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  74. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  75. audio_path: /kiap/data/speller/Audio/exploration
  76. number_of_stim: 5
  77. feedback: !munch.Munch {tone_length: 0.25, target_tone_length: 1.0, hold_iterations: 2,
  78. alpha: 360, target_n_tones: 5, beta: 120, feedback_tone: true}
  79. speller: !munch.Munch {audio_result_fb: false, speller_matrix: true, type: feedback,
  80. pyttsx_rate: 100, audio: true}
  81. sim_data: !munch.Munch {rate_bl: 10}
  82. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  83. daq: !munch.Munch
  84. smpl_fct: 30
  85. normalization: !munch.Munch
  86. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  87. len: 600.0
  88. use_all_channels: false
  89. do_update: false
  90. update_interval: 10.0
  91. channels:
  92. - !munch.Munch {id: 105, bottom: 5, top: 9, invert: false}
  93. range: [10, 90]
  94. clamp_firing_rates: true
  95. car_channels: []
  96. data_source: spike_rates
  97. fs: 30000.0
  98. daq_sleep: 0.1
  99. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  100. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  101. trigger_len: 50
  102. spike_band_power: !munch.Munch
  103. loop_interval: 50
  104. filter: !munch.Munch
  105. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  106. a: [1, -1.91119706742607, 0.914975834801434]
  107. integrated_samples: 1500
  108. average_n_bins: 10
  109. sample_group: 6
  110. n_channels_max: 128
  111. exclude_channels: []
  112. n_channels: 128
  113. session: !munch.Munch
  114. flags: !munch.Munch {stimulus: true, bl_rand: false, decode: false, bl: true}
  115. recording: !munch.Munch
  116. timing: !munch.Munch {t_baseline_all: 1.0, t_baseline_1: 5.0, recording_loop_interval_data: 0.02,
  117. decoder_refresh_interval: 0.01, t_baseline_rand: 1.0, bci_loop_interval: 0.05,
  118. t_response: 5.0, recording_loop_interval: 0.05, t_after_stimulus: 0.0}
  119. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  120. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-05-15,
  121. filename_data: /data/clinical/neural/fr/2020-05-15/data_17_49_26.bin, filename_baseline: /data/clinical/neural/fr/2020-05-15/bl_17_49_26.npy,
  122. filename_log_info: /data/clinical/neural/fr/2020-05-15/info_17_49_26.log, filename_log_debug: /data/clinical/neural/fr/2020-05-15/debug_17_49_26.log,
  123. filename_events: /data/clinical/neural/fr/2020-05-15/events_17_49_26.txt, filename_config: /data/clinical/neural/fr/2020-05-15/config_17_49_26.yaml,
  124. filename_paradigm: /data/clinical/neural/fr/2020-05-15/paradigm_17_49_26.yaml, filename_config_dump: /data/clinical/neural/fr/2020-05-15/config_dump_17_49_26.yaml,
  125. filename_git_patch: /data/clinical/neural/fr/2020-05-15/git_changes_17_49_26.patch,
  126. filename_history: /data/clinical/neural/fr/2020-05-15/history.bin, filename_corpus: /data/clinical/neural/fr/2020-05-15/user_corpus_17_49_26.txt,
  127. git_hash: 7433eaa}
  128. classifier: !munch.Munch
  129. saved_model_conf_name: config/model_conf.yaml
  130. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  131. args:
  132. - !!python/name:numpy.ndarray ''
  133. - !!python/tuple [0]
  134. - !!binary |
  135. Yg==
  136. state: !!python/tuple
  137. - 1
  138. - !!python/tuple [8]
  139. - !!python/object/apply:numpy.dtype
  140. args: [i8, 0, 1]
  141. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  142. - false
  143. - !!binary |
  144. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  145. AAAAAAAAAA==
  146. trigger_pos: start
  147. thr_window: 40
  148. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  149. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  150. n_classes: 2
  151. break_loop: true
  152. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  153. include_channels: [20]
  154. exclude_data_channels: []
  155. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  156. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  157. n_neg_train: 100000
  158. psth: !munch.Munch
  159. cut: [-40, 100]
  160. n_triggers: 2
  161. deadtime: 40
  162. online: false
  163. max_active_ch_nr: []
  164. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  165. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  166. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  167. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  168. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  169. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  170. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  171. thr_prob: 0.8
  172. n_features: 1024
  173. lfp: !munch.Munch
  174. fs: 1000
  175. sampling_ratio: 30
  176. filter_fc_lb: [10, 0]
  177. filter_fc_mb: [12, 40]
  178. filter_fc_hb: [60, 250]
  179. filter_order_lb: 2
  180. filter_order_mb: 6
  181. filter_order_hb: 10
  182. artifact_thr: 400
  183. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  184. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  185. array21: [0, 1]
  186. array22: []
  187. array1_exclude: []
  188. array2_exclude: []
  189. i_start: 0
  190. i_stop: -1
  191. psth_win: [-1000, 5000]
  192. exclude: false
  193. normalize: false
  194. zscore: false
  195. car: true
  196. sub_band: 1
  197. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  198. spectra: !munch.Munch {spgr_len: 500}
  199. plot: !munch.Munch
  200. ch_ids: [0]
  201. general: true
  202. filters: false
  203. array2: [0, 1]
  204. general: !munch.Munch {debug: 1, clear_trial_history: false}
  205. system: !munch.Munch {plot: 0}
  206. buffer: !munch.Munch
  207. length: 600
  208. shape: [600, 128]
  209. plot: !munch.Munch
  210. channels: [20, 96, 109]
  211. filter_min_rate: 2
  212. pca: false
  213. fps: 10.0
  214. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback_wo_reward.yaml]