config_dump_17_16_50.yaml 8.0 KB

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  1. !munch.Munch
  2. plot: !munch.Munch
  3. pca: false
  4. channels: [20, 96, 109]
  5. fps: 10.0
  6. filter_min_rate: 2
  7. speller: !munch.Munch {type: feedback, pyttsx_rate: 100, speller_matrix: true, audio_result_fb: false,
  8. audio: true}
  9. paradigms: !munch.Munch
  10. training_color: !munch.Munch
  11. mode: [Training]
  12. selected_mode: 0
  13. states:
  14. - - gelb
  15. - [E, A, D, C, B, F, ^]
  16. - - gruen
  17. - [N, S, R, O, M, P, Q, ^]
  18. - - rot
  19. - [I, H, L, G, K, J, ^]
  20. - - blau
  21. - [T, U, W, Z, V, Y, X, ^]
  22. - - weiss
  23. - [<, <<<, ., '?', word, end, ^]
  24. training_string: Gustav
  25. confirmation_yes: 1
  26. confirmation_no: 1
  27. exploration: !munch.Munch
  28. mode: [Screening]
  29. selected_mode: 0
  30. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  31. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  32. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  33. audio_path: /kiap/data/speller/Audio/exploration
  34. number_of_stim: 5
  35. color: !munch.Munch
  36. mode: [Validation, Free]
  37. selected_mode: 1
  38. states:
  39. - - gelb
  40. - [E, A, D, C, B, F, ^]
  41. - - gruen
  42. - [N, S, R, O, M, P, Q, ^]
  43. - - rot
  44. - [I, H, L, G, K, J, ^]
  45. - - blau
  46. - [T, U, W, Z, V, Y, X, ^]
  47. - - weiss
  48. - [<, ' ', <<<, ., end, ^]
  49. max_length_vocabulary: 5
  50. confirmation_num_yes: 2
  51. confirmation_num_no: 1
  52. opposite_answers_methods: [last, majority]
  53. selected_opposite_answers_method: 0
  54. corpora_path: /kiap/data/speller/Corpora
  55. audio_path: /kiap/data/speller/Audio
  56. general_corpus: cfd_leipzig.p
  57. general_user_corpus: general_user_cfd.txt
  58. speller_user_corpus: speller_user.txt
  59. word_prediction: true
  60. validation_string: ''
  61. init_string: ''
  62. n_repeat_unclassified: 1
  63. question: !munch.Munch
  64. mode: [Training, Validation, Free]
  65. selected_mode: 1
  66. audio_path: /kiap/data/speller/Audio/question
  67. number_of_stim: 10
  68. symmetrical: true
  69. feedback: !munch.Munch
  70. play_end_feedback: !munch.Munch {success: true, fail: true}
  71. mode: [Training, Validation]
  72. number_of_stim: 10
  73. audio_path: /kiap/data/speller/feedback/
  74. symmetrical: true
  75. states: !munch.Munch
  76. up: [1.0, 0.7, 1.0]
  77. down: [0.0, 0.0, 0.3]
  78. selected_mode: 0
  79. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  80. variablesToShowInGUI: !munch.Munch
  81. variableGroups: [timing, color]
  82. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  83. t: 1
  84. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  85. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-05-15,
  86. filename_data: /data/clinical/neural/fr/2020-05-15/data_17_16_50.bin, filename_baseline: /data/clinical/neural/fr/2020-05-15/bl_17_16_50.npy,
  87. filename_log_info: /data/clinical/neural/fr/2020-05-15/info_17_16_50.log, filename_log_debug: /data/clinical/neural/fr/2020-05-15/debug_17_16_50.log,
  88. filename_events: /data/clinical/neural/fr/2020-05-15/events_17_16_50.txt, filename_config: /data/clinical/neural/fr/2020-05-15/config_17_16_50.yaml,
  89. filename_paradigm: /data/clinical/neural/fr/2020-05-15/paradigm_17_16_50.yaml, filename_config_dump: /data/clinical/neural/fr/2020-05-15/config_dump_17_16_50.yaml,
  90. filename_git_patch: /data/clinical/neural/fr/2020-05-15/git_changes_17_16_50.patch,
  91. filename_history: /data/clinical/neural/fr/2020-05-15/history.bin, filename_corpus: /data/clinical/neural/fr/2020-05-15/user_corpus_17_16_50.txt,
  92. git_hash: 7433eaa}
  93. sim_data: !munch.Munch {rate_bl: 10}
  94. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  95. classifier: !munch.Munch
  96. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  97. args:
  98. - !!python/name:numpy.ndarray ''
  99. - !!python/tuple [0]
  100. - !!binary |
  101. Yg==
  102. state: !!python/tuple
  103. - 1
  104. - !!python/tuple [8]
  105. - !!python/object/apply:numpy.dtype
  106. args: [i8, 0, 1]
  107. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  108. - false
  109. - !!binary |
  110. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  111. AAAAAAAAAA==
  112. exclude_data_channels: []
  113. thr_prob: 0.8
  114. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  115. n_neg_train: 100000
  116. include_channels: [20]
  117. saved_model_conf_name: config/model_conf.yaml
  118. thr_window: 40
  119. trigger_pos: start
  120. n_triggers: 2
  121. deadtime: 40
  122. psth: !munch.Munch
  123. cut: [-40, 100]
  124. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  125. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  126. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  127. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  128. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  129. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  130. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  131. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  132. n_classes: 2
  133. max_active_ch_nr: []
  134. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  135. online: false
  136. break_loop: true
  137. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  138. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  139. n_features: 1024
  140. buffer: !munch.Munch
  141. length: 600
  142. shape: [600, 128]
  143. daq: !munch.Munch
  144. data_source: spike_rates
  145. exclude_channels: []
  146. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  147. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  148. normalization: !munch.Munch
  149. channels:
  150. - !munch.Munch {id: 105, bottom: 7.5, top: 12, invert: false}
  151. clamp_firing_rates: true
  152. range: [10, 90]
  153. len: 600.0
  154. do_update: false
  155. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  156. update_interval: 10.0
  157. use_all_channels: false
  158. car_channels: []
  159. smpl_fct: 30
  160. fs: 30000.0
  161. trigger_len: 50
  162. daq_sleep: 0.1
  163. spike_band_power: !munch.Munch
  164. integrated_samples: 1500
  165. filter: !munch.Munch
  166. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  167. a: [1, -1.91119706742607, 0.914975834801434]
  168. average_n_bins: 10
  169. sample_group: 6
  170. loop_interval: 50
  171. n_channels_max: 128
  172. n_channels: 128
  173. recording: !munch.Munch
  174. timing: !munch.Munch {t_response: 5.0, decoder_refresh_interval: 0.01, t_baseline_all: 1.0,
  175. t_after_stimulus: 0.2, t_baseline_1: 5.0, t_baseline_rand: 1.0, recording_loop_interval_data: 0.02,
  176. recording_loop_interval: 0.05, bci_loop_interval: 0.05}
  177. lfp: !munch.Munch
  178. fs: 1000
  179. sampling_ratio: 30
  180. filter_fc_lb: [10, 0]
  181. filter_fc_mb: [12, 40]
  182. filter_fc_hb: [60, 250]
  183. filter_order_lb: 2
  184. filter_order_mb: 6
  185. filter_order_hb: 10
  186. artifact_thr: 400
  187. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  188. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  189. array21: [0, 1]
  190. array22: []
  191. array1_exclude: []
  192. array2_exclude: []
  193. i_start: 0
  194. i_stop: -1
  195. psth_win: [-1000, 5000]
  196. exclude: false
  197. normalize: false
  198. zscore: false
  199. car: true
  200. sub_band: 1
  201. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  202. spectra: !munch.Munch {spgr_len: 500}
  203. plot: !munch.Munch
  204. ch_ids: [0]
  205. general: true
  206. filters: false
  207. array2: [0, 1]
  208. system: !munch.Munch {plot: 0}
  209. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback.yaml]
  210. general: !munch.Munch {debug: 1, clear_trial_history: false}
  211. feedback: !munch.Munch {tone_length: 0.25, feedback_tone: true, alpha: 360, target_n_tones: 5,
  212. beta: 120, target_tone_length: 1.0, hold_iterations: 2}
  213. session: !munch.Munch
  214. flags: !munch.Munch {decode: false, stimulus: true, bl_rand: true, bl: true}