config_dump_17_06_57.yaml 8.0 KB

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  1. !munch.Munch
  2. general: !munch.Munch {debug: 1, clear_trial_history: false}
  3. buffer: !munch.Munch
  4. length: 600
  5. shape: [600, 128]
  6. classifier: !munch.Munch
  7. online: false
  8. saved_model_conf_name: config/model_conf.yaml
  9. n_classes: 2
  10. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  11. n_triggers: 2
  12. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  13. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  14. trigger_pos: start
  15. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  16. args:
  17. - !!python/name:numpy.ndarray ''
  18. - !!python/tuple [0]
  19. - !!binary |
  20. Yg==
  21. state: !!python/tuple
  22. - 1
  23. - !!python/tuple [8]
  24. - !!python/object/apply:numpy.dtype
  25. args: [i8, 0, 1]
  26. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  27. - false
  28. - !!binary |
  29. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  30. AAAAAAAAAA==
  31. break_loop: true
  32. deadtime: 40
  33. max_active_ch_nr: []
  34. include_channels: [20]
  35. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  36. n_neg_train: 100000
  37. psth: !munch.Munch
  38. cut: [-40, 100]
  39. exclude_data_channels: []
  40. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  41. thr_prob: 0.8
  42. thr_window: 40
  43. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  44. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  45. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  46. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  47. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  48. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  49. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  50. n_features: 1024
  51. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  52. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-05-15,
  53. filename_data: /data/clinical/neural/fr/2020-05-15/data_17_06_57.bin, filename_baseline: /data/clinical/neural/fr/2020-05-15/bl_17_06_57.npy,
  54. filename_log_info: /data/clinical/neural/fr/2020-05-15/info_17_06_57.log, filename_log_debug: /data/clinical/neural/fr/2020-05-15/debug_17_06_57.log,
  55. filename_events: /data/clinical/neural/fr/2020-05-15/events_17_06_57.txt, filename_config: /data/clinical/neural/fr/2020-05-15/config_17_06_57.yaml,
  56. filename_paradigm: /data/clinical/neural/fr/2020-05-15/paradigm_17_06_57.yaml, filename_config_dump: /data/clinical/neural/fr/2020-05-15/config_dump_17_06_57.yaml,
  57. filename_git_patch: /data/clinical/neural/fr/2020-05-15/git_changes_17_06_57.patch,
  58. filename_history: /data/clinical/neural/fr/2020-05-15/history.bin, filename_corpus: /data/clinical/neural/fr/2020-05-15/user_corpus_17_06_57.txt,
  59. git_hash: 7433eaa}
  60. feedback: !munch.Munch {target_n_tones: 5, beta: 120, alpha: 360, target_tone_length: 1.0,
  61. feedback_tone: true, tone_length: 0.25, hold_iterations: 2}
  62. plot: !munch.Munch
  63. pca: false
  64. channels: [20, 96, 109]
  65. filter_min_rate: 2
  66. fps: 10.0
  67. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback.yaml]
  68. speller: !munch.Munch {audio: true, type: feedback, pyttsx_rate: 100, speller_matrix: true,
  69. audio_result_fb: false}
  70. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  71. recording: !munch.Munch
  72. timing: !munch.Munch {t_after_stimulus: 0.2, t_baseline_rand: 1.0, t_baseline_1: 5.0,
  73. t_baseline_all: 1.0, bci_loop_interval: 0.05, decoder_refresh_interval: 0.01,
  74. t_response: 5.0, recording_loop_interval: 0.05, recording_loop_interval_data: 0.02}
  75. lfp: !munch.Munch
  76. fs: 1000
  77. sampling_ratio: 30
  78. filter_fc_lb: [10, 0]
  79. filter_fc_mb: [12, 40]
  80. filter_fc_hb: [60, 250]
  81. filter_order_lb: 2
  82. filter_order_mb: 6
  83. filter_order_hb: 10
  84. artifact_thr: 400
  85. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  86. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  87. array21: [0, 1]
  88. array22: []
  89. array1_exclude: []
  90. array2_exclude: []
  91. i_start: 0
  92. i_stop: -1
  93. psth_win: [-1000, 5000]
  94. exclude: false
  95. normalize: false
  96. zscore: false
  97. car: true
  98. sub_band: 1
  99. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  100. spectra: !munch.Munch {spgr_len: 500}
  101. plot: !munch.Munch
  102. ch_ids: [0]
  103. general: true
  104. filters: false
  105. array2: [0, 1]
  106. daq: !munch.Munch
  107. car_channels: []
  108. smpl_fct: 30
  109. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  110. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  111. trigger_len: 50
  112. fs: 30000.0
  113. n_channels_max: 128
  114. normalization: !munch.Munch
  115. clamp_firing_rates: true
  116. len: 600.0
  117. do_update: false
  118. range: [10, 90]
  119. update_interval: 10.0
  120. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  121. channels:
  122. - !munch.Munch {id: 105, bottom: 6, top: 12, invert: false}
  123. use_all_channels: false
  124. spike_band_power: !munch.Munch
  125. filter: !munch.Munch
  126. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  127. a: [1, -1.91119706742607, 0.914975834801434]
  128. loop_interval: 50
  129. average_n_bins: 10
  130. sample_group: 6
  131. integrated_samples: 1500
  132. daq_sleep: 0.1
  133. data_source: spike_rates
  134. exclude_channels: []
  135. n_channels: 128
  136. session: !munch.Munch
  137. flags: !munch.Munch {decode: false, bl_rand: true, bl: true, stimulus: true}
  138. sim_data: !munch.Munch {rate_bl: 10}
  139. paradigms: !munch.Munch
  140. question: !munch.Munch
  141. mode: [Training, Validation, Free]
  142. selected_mode: 1
  143. audio_path: /kiap/data/speller/Audio/question
  144. number_of_stim: 10
  145. symmetrical: true
  146. training_color: !munch.Munch
  147. mode: [Training]
  148. selected_mode: 0
  149. states:
  150. - - gelb
  151. - [E, A, D, C, B, F, ^]
  152. - - gruen
  153. - [N, S, R, O, M, P, Q, ^]
  154. - - rot
  155. - [I, H, L, G, K, J, ^]
  156. - - blau
  157. - [T, U, W, Z, V, Y, X, ^]
  158. - - weiss
  159. - [<, <<<, ., '?', word, end, ^]
  160. training_string: Gustav
  161. confirmation_yes: 1
  162. confirmation_no: 1
  163. variablesToShowInGUI: !munch.Munch
  164. variableGroups: [timing, color]
  165. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  166. t: 1
  167. exploration: !munch.Munch
  168. mode: [Screening]
  169. selected_mode: 0
  170. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  171. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  172. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  173. audio_path: /kiap/data/speller/Audio/exploration
  174. number_of_stim: 5
  175. color: !munch.Munch
  176. mode: [Validation, Free]
  177. selected_mode: 1
  178. states:
  179. - - gelb
  180. - [E, A, D, C, B, F, ^]
  181. - - gruen
  182. - [N, S, R, O, M, P, Q, ^]
  183. - - rot
  184. - [I, H, L, G, K, J, ^]
  185. - - blau
  186. - [T, U, W, Z, V, Y, X, ^]
  187. - - weiss
  188. - [<, ' ', <<<, ., end, ^]
  189. max_length_vocabulary: 5
  190. confirmation_num_yes: 2
  191. confirmation_num_no: 1
  192. opposite_answers_methods: [last, majority]
  193. selected_opposite_answers_method: 0
  194. corpora_path: /kiap/data/speller/Corpora
  195. audio_path: /kiap/data/speller/Audio
  196. general_corpus: cfd_leipzig.p
  197. general_user_corpus: general_user_cfd.txt
  198. speller_user_corpus: speller_user.txt
  199. word_prediction: true
  200. validation_string: ''
  201. init_string: ''
  202. n_repeat_unclassified: 1
  203. feedback: !munch.Munch
  204. number_of_stim: 10
  205. states: !munch.Munch
  206. down: [0.0, 0.0, 0.3]
  207. up: [1.0, 0.7, 1.0]
  208. audio_path: /kiap/data/speller/feedback/
  209. mode: [Training, Validation]
  210. selected_mode: 0
  211. symmetrical: true
  212. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  213. play_end_feedback: !munch.Munch {success: true, fail: true}
  214. system: !munch.Munch {plot: 0}