config_dump_19_26_42.yaml 8.0 KB

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  1. !munch.Munch
  2. buffer: !munch.Munch
  3. length: 600
  4. shape: [600, 128]
  5. daq: !munch.Munch
  6. data_source: spike_rates
  7. n_channels_max: 128
  8. smpl_fct: 30
  9. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  10. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  11. spike_band_power: !munch.Munch
  12. integrated_samples: 1500
  13. loop_interval: 50
  14. average_n_bins: 10
  15. sample_group: 6
  16. filter: !munch.Munch
  17. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  18. a: [1, -1.91119706742607, 0.914975834801434]
  19. exclude_channels: []
  20. daq_sleep: 0.1
  21. normalization: !munch.Munch
  22. len: 600.0
  23. channels:
  24. - !munch.Munch {id: 20, bottom: 1.5, top: 4.5, invert: true}
  25. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  26. update_interval: 10.0
  27. do_update: false
  28. clamp_firing_rates: true
  29. use_all_channels: false
  30. range: [10, 90]
  31. fs: 30000.0
  32. trigger_len: 50
  33. car_channels: []
  34. n_channels: 128
  35. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  36. feedback: !munch.Munch {alpha: 360, hold_iterations: 2, feedback_tone: true, beta: 120,
  37. tone_length: 0.25, target_tone_length: 1.0, target_n_tones: 5}
  38. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback.yaml]
  39. paradigms: !munch.Munch
  40. variablesToShowInGUI: !munch.Munch
  41. variableGroups: [timing, color]
  42. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  43. t: 1
  44. color: !munch.Munch
  45. mode: [Validation, Free]
  46. selected_mode: 1
  47. states:
  48. - - gelb
  49. - [E, A, D, C, B, F, ^]
  50. - - gruen
  51. - [N, S, R, O, M, P, Q, ^]
  52. - - rot
  53. - [I, H, L, G, K, J, ^]
  54. - - blau
  55. - [T, U, W, Z, V, Y, X, ^]
  56. - - weiss
  57. - [<, ' ', <<<, ., end, ^]
  58. max_length_vocabulary: 5
  59. confirmation_num_yes: 2
  60. confirmation_num_no: 1
  61. opposite_answers_methods: [last, majority]
  62. selected_opposite_answers_method: 0
  63. corpora_path: /kiap/data/speller/Corpora
  64. audio_path: /kiap/data/speller/Audio
  65. general_corpus: cfd_leipzig.p
  66. general_user_corpus: general_user_cfd.txt
  67. speller_user_corpus: speller_user.txt
  68. word_prediction: true
  69. validation_string: ''
  70. init_string: ''
  71. n_repeat_unclassified: 1
  72. exploration: !munch.Munch
  73. mode: [Screening]
  74. selected_mode: 0
  75. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  76. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  77. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  78. audio_path: /kiap/data/speller/Audio/exploration
  79. number_of_stim: 5
  80. feedback: !munch.Munch
  81. mode: [Training, Validation]
  82. symmetrical: true
  83. states: !munch.Munch
  84. down: [0.0, 0.0, 0.3]
  85. up: [1.0, 0.7, 1.0]
  86. number_of_stim: 10
  87. play_end_feedback: !munch.Munch {success: true, fail: true}
  88. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  89. selected_mode: 0
  90. audio_path: /kiap/data/speller/feedback/
  91. question: !munch.Munch
  92. mode: [Training, Validation, Free]
  93. selected_mode: 1
  94. audio_path: /kiap/data/speller/Audio/question
  95. number_of_stim: 10
  96. symmetrical: true
  97. training_color: !munch.Munch
  98. mode: [Training]
  99. selected_mode: 0
  100. states:
  101. - - gelb
  102. - [E, A, D, C, B, F, ^]
  103. - - gruen
  104. - [N, S, R, O, M, P, Q, ^]
  105. - - rot
  106. - [I, H, L, G, K, J, ^]
  107. - - blau
  108. - [T, U, W, Z, V, Y, X, ^]
  109. - - weiss
  110. - [<, <<<, ., '?', word, end, ^]
  111. training_string: Gustav
  112. confirmation_yes: 1
  113. confirmation_no: 1
  114. system: !munch.Munch {plot: 0}
  115. session: !munch.Munch
  116. flags: !munch.Munch {bl_rand: true, bl: true, stimulus: true, decode: false}
  117. recording: !munch.Munch
  118. timing: !munch.Munch {t_baseline_all: 1.0, recording_loop_interval: 0.05, bci_loop_interval: 0.05,
  119. t_after_stimulus: 0.2, recording_loop_interval_data: 0.02, decoder_refresh_interval: 0.01,
  120. t_baseline_rand: 1.0, t_baseline_1: 5.0, t_response: 5.0}
  121. general: !munch.Munch {debug: 1, clear_trial_history: false}
  122. lfp: !munch.Munch
  123. fs: 1000
  124. sampling_ratio: 30
  125. filter_fc_lb: [10, 0]
  126. filter_fc_mb: [12, 40]
  127. filter_fc_hb: [60, 250]
  128. filter_order_lb: 2
  129. filter_order_mb: 6
  130. filter_order_hb: 10
  131. artifact_thr: 400
  132. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  133. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  134. array21: [0, 1]
  135. array22: []
  136. array1_exclude: []
  137. array2_exclude: []
  138. i_start: 0
  139. i_stop: -1
  140. psth_win: [-1000, 5000]
  141. exclude: false
  142. normalize: false
  143. zscore: false
  144. car: true
  145. sub_band: 1
  146. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  147. spectra: !munch.Munch {spgr_len: 500}
  148. plot: !munch.Munch
  149. ch_ids: [0]
  150. general: true
  151. filters: false
  152. array2: [0, 1]
  153. classifier: !munch.Munch
  154. exclude_data_channels: []
  155. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  156. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  157. break_loop: true
  158. online: false
  159. trigger_pos: start
  160. thr_window: 40
  161. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  162. deadtime: 40
  163. psth: !munch.Munch
  164. cut: [-40, 100]
  165. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  166. n_neg_train: 100000
  167. n_triggers: 2
  168. saved_model_conf_name: config/model_conf.yaml
  169. n_classes: 2
  170. max_active_ch_nr: []
  171. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  172. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  173. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  174. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  175. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  176. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  177. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  178. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  179. thr_prob: 0.8
  180. include_channels: [20]
  181. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  182. args:
  183. - !!python/name:numpy.ndarray ''
  184. - !!python/tuple [0]
  185. - !!binary |
  186. Yg==
  187. state: !!python/tuple
  188. - 1
  189. - !!python/tuple [8]
  190. - !!python/object/apply:numpy.dtype
  191. args: [i8, 0, 1]
  192. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  193. - false
  194. - !!binary |
  195. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  196. AAAAAAAAAA==
  197. n_features: 1024
  198. speller: !munch.Munch {audio_result_fb: false, speller_matrix: true, audio: true,
  199. pyttsx_rate: 100, type: feedback}
  200. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  201. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-04-29,
  202. filename_data: /data/clinical/neural/fr/2020-04-29/data_19_26_42.bin, filename_baseline: /data/clinical/neural/fr/2020-04-29/bl_19_26_42.npy,
  203. filename_log_info: /data/clinical/neural/fr/2020-04-29/info_19_26_42.log, filename_log_debug: /data/clinical/neural/fr/2020-04-29/debug_19_26_42.log,
  204. filename_events: /data/clinical/neural/fr/2020-04-29/events_19_26_42.txt, filename_config: /data/clinical/neural/fr/2020-04-29/config_19_26_42.yaml,
  205. filename_paradigm: /data/clinical/neural/fr/2020-04-29/paradigm_19_26_42.yaml, filename_config_dump: /data/clinical/neural/fr/2020-04-29/config_dump_19_26_42.yaml,
  206. filename_git_patch: /data/clinical/neural/fr/2020-04-29/git_changes_19_26_42.patch,
  207. filename_history: /data/clinical/neural/fr/2020-04-29/history.bin, filename_corpus: /data/clinical/neural/fr/2020-04-29/user_corpus_19_26_42.txt,
  208. git_hash: 7433eaa}
  209. sim_data: !munch.Munch {rate_bl: 10}
  210. plot: !munch.Munch
  211. channels: [20, 96, 109]
  212. pca: false
  213. filter_min_rate: 2
  214. fps: 10.0