config_dump_19_21_36.yaml 8.0 KB

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  1. !munch.Munch
  2. classifier: !munch.Munch
  3. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  4. args:
  5. - !!python/name:numpy.ndarray ''
  6. - !!python/tuple [0]
  7. - !!binary |
  8. Yg==
  9. state: !!python/tuple
  10. - 1
  11. - !!python/tuple [8]
  12. - !!python/object/apply:numpy.dtype
  13. args: [i8, 0, 1]
  14. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  15. - false
  16. - !!binary |
  17. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  18. AAAAAAAAAA==
  19. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  20. break_loop: true
  21. thr_window: 40
  22. n_classes: 2
  23. saved_model_conf_name: config/model_conf.yaml
  24. psth: !munch.Munch
  25. cut: [-40, 100]
  26. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  27. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  28. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  29. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  30. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  31. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  32. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  33. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  34. max_active_ch_nr: []
  35. thr_prob: 0.8
  36. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  37. n_triggers: 2
  38. trigger_pos: start
  39. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  40. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  41. n_neg_train: 100000
  42. online: false
  43. exclude_data_channels: []
  44. include_channels: [20]
  45. deadtime: 40
  46. n_features: 1024
  47. system: !munch.Munch {plot: 0}
  48. lfp: !munch.Munch
  49. fs: 1000
  50. sampling_ratio: 30
  51. filter_fc_lb: [10, 0]
  52. filter_fc_mb: [12, 40]
  53. filter_fc_hb: [60, 250]
  54. filter_order_lb: 2
  55. filter_order_mb: 6
  56. filter_order_hb: 10
  57. artifact_thr: 400
  58. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  59. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  60. array21: [0, 1]
  61. array22: []
  62. array1_exclude: []
  63. array2_exclude: []
  64. i_start: 0
  65. i_stop: -1
  66. psth_win: [-1000, 5000]
  67. exclude: false
  68. normalize: false
  69. zscore: false
  70. car: true
  71. sub_band: 1
  72. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  73. spectra: !munch.Munch {spgr_len: 500}
  74. plot: !munch.Munch
  75. ch_ids: [0]
  76. general: true
  77. filters: false
  78. array2: [0, 1]
  79. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  80. daq: !munch.Munch
  81. data_source: spike_rates
  82. exclude_channels: []
  83. smpl_fct: 30
  84. normalization: !munch.Munch
  85. len: 600.0
  86. do_update: false
  87. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  88. update_interval: 10.0
  89. range: [10, 90]
  90. clamp_firing_rates: true
  91. channels:
  92. - !munch.Munch {id: 16, bottom: 2, top: 4, invert: false}
  93. use_all_channels: false
  94. fs: 30000.0
  95. n_channels_max: 128
  96. spike_band_power: !munch.Munch
  97. average_n_bins: 10
  98. loop_interval: 50
  99. filter: !munch.Munch
  100. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  101. a: [1, -1.91119706742607, 0.914975834801434]
  102. integrated_samples: 1500
  103. sample_group: 6
  104. daq_sleep: 0.1
  105. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  106. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  107. car_channels: []
  108. trigger_len: 50
  109. n_channels: 128
  110. buffer: !munch.Munch
  111. length: 600
  112. shape: [600, 128]
  113. sim_data: !munch.Munch {rate_bl: 10}
  114. feedback: !munch.Munch {target_tone_length: 1.0, beta: 120, feedback_tone: true, target_n_tones: 5,
  115. tone_length: 0.25, hold_iterations: 2, alpha: 360}
  116. paradigms: !munch.Munch
  117. color: !munch.Munch
  118. mode: [Validation, Free]
  119. selected_mode: 1
  120. states:
  121. - - gelb
  122. - [E, A, D, C, B, F, ^]
  123. - - gruen
  124. - [N, S, R, O, M, P, Q, ^]
  125. - - rot
  126. - [I, H, L, G, K, J, ^]
  127. - - blau
  128. - [T, U, W, Z, V, Y, X, ^]
  129. - - weiss
  130. - [<, ' ', <<<, ., end, ^]
  131. max_length_vocabulary: 5
  132. confirmation_num_yes: 2
  133. confirmation_num_no: 1
  134. opposite_answers_methods: [last, majority]
  135. selected_opposite_answers_method: 0
  136. corpora_path: /kiap/data/speller/Corpora
  137. audio_path: /kiap/data/speller/Audio
  138. general_corpus: cfd_leipzig.p
  139. general_user_corpus: general_user_cfd.txt
  140. speller_user_corpus: speller_user.txt
  141. word_prediction: true
  142. validation_string: ''
  143. init_string: ''
  144. n_repeat_unclassified: 1
  145. variablesToShowInGUI: !munch.Munch
  146. variableGroups: [timing, color]
  147. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  148. t: 1
  149. feedback: !munch.Munch
  150. selected_mode: 0
  151. states: !munch.Munch
  152. up: [1.0, 0.7, 1.0]
  153. down: [0.0, 0.0, 0.3]
  154. mode: [Training, Validation]
  155. audio_path: /kiap/data/speller/feedback/
  156. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  157. number_of_stim: 10
  158. play_end_feedback: !munch.Munch {fail: false, success: false}
  159. symmetrical: true
  160. question: !munch.Munch
  161. mode: [Training, Validation, Free]
  162. selected_mode: 1
  163. audio_path: /kiap/data/speller/Audio/question
  164. number_of_stim: 10
  165. symmetrical: true
  166. exploration: !munch.Munch
  167. mode: [Screening]
  168. selected_mode: 0
  169. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  170. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  171. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  172. audio_path: /kiap/data/speller/Audio/exploration
  173. number_of_stim: 5
  174. training_color: !munch.Munch
  175. mode: [Training]
  176. selected_mode: 0
  177. states:
  178. - - gelb
  179. - [E, A, D, C, B, F, ^]
  180. - - gruen
  181. - [N, S, R, O, M, P, Q, ^]
  182. - - rot
  183. - [I, H, L, G, K, J, ^]
  184. - - blau
  185. - [T, U, W, Z, V, Y, X, ^]
  186. - - weiss
  187. - [<, <<<, ., '?', word, end, ^]
  188. training_string: Gustav
  189. confirmation_yes: 1
  190. confirmation_no: 1
  191. speller: !munch.Munch {audio_result_fb: false, type: feedback, speller_matrix: true,
  192. pyttsx_rate: 100, audio: true}
  193. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  194. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-04-29,
  195. filename_data: /data/clinical/neural/fr/2020-04-29/data_19_21_36.bin, filename_baseline: /data/clinical/neural/fr/2020-04-29/bl_19_21_36.npy,
  196. filename_log_info: /data/clinical/neural/fr/2020-04-29/info_19_21_36.log, filename_log_debug: /data/clinical/neural/fr/2020-04-29/debug_19_21_36.log,
  197. filename_events: /data/clinical/neural/fr/2020-04-29/events_19_21_36.txt, filename_config: /data/clinical/neural/fr/2020-04-29/config_19_21_36.yaml,
  198. filename_paradigm: /data/clinical/neural/fr/2020-04-29/paradigm_19_21_36.yaml, filename_config_dump: /data/clinical/neural/fr/2020-04-29/config_dump_19_21_36.yaml,
  199. filename_git_patch: /data/clinical/neural/fr/2020-04-29/git_changes_19_21_36.patch,
  200. filename_history: /data/clinical/neural/fr/2020-04-29/history.bin, filename_corpus: /data/clinical/neural/fr/2020-04-29/user_corpus_19_21_36.txt,
  201. git_hash: 7433eaa}
  202. plot: !munch.Munch
  203. pca: false
  204. channels: [20, 96, 109]
  205. filter_min_rate: 2
  206. fps: 10.0
  207. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback_wo_reward.yaml]
  208. general: !munch.Munch {debug: 1, clear_trial_history: false}
  209. recording: !munch.Munch
  210. timing: !munch.Munch {t_baseline_all: 1.0, t_baseline_1: 5.0, recording_loop_interval_data: 0.02,
  211. t_baseline_rand: 1.0, t_after_stimulus: 0.0, bci_loop_interval: 0.05, t_response: 5.0,
  212. decoder_refresh_interval: 0.01, recording_loop_interval: 0.05}
  213. session: !munch.Munch
  214. flags: !munch.Munch {stimulus: true, decode: false, bl: true, bl_rand: false}