config_dump_16_35_43.yaml 8.0 KB

123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117118119120121122123124125126127128129130131132133134135136137138139140141142143144145146147148149150151152153154155156157158159160161162163164165166167168169170171172173174175176177178179180181182183184185186187188189190191192193194195196197198199200201202203204205206207208209210211212213214
  1. !munch.Munch
  2. classifier: !munch.Munch
  3. saved_model_conf_name: config/model_conf.yaml
  4. exclude_data_channels: []
  5. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  6. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  7. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  8. args:
  9. - !!python/name:numpy.ndarray ''
  10. - !!python/tuple [0]
  11. - !!binary |
  12. Yg==
  13. state: !!python/tuple
  14. - 1
  15. - !!python/tuple [8]
  16. - !!python/object/apply:numpy.dtype
  17. args: [i8, 0, 1]
  18. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  19. - false
  20. - !!binary |
  21. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  22. AAAAAAAAAA==
  23. break_loop: true
  24. deadtime: 40
  25. online: false
  26. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  27. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  28. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  29. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  30. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  31. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  32. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  33. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  34. n_neg_train: 100000
  35. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  36. n_classes: 2
  37. max_active_ch_nr: []
  38. thr_window: 40
  39. n_triggers: 2
  40. thr_prob: 0.8
  41. trigger_pos: start
  42. psth: !munch.Munch
  43. cut: [-40, 100]
  44. include_channels: [20]
  45. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  46. n_features: 1024
  47. buffer: !munch.Munch
  48. length: 600
  49. shape: [600, 128]
  50. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  51. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-04-29,
  52. filename_data: /data/clinical/neural/fr/2020-04-29/data_16_35_43.bin, filename_baseline: /data/clinical/neural/fr/2020-04-29/bl_16_35_43.npy,
  53. filename_log_info: /data/clinical/neural/fr/2020-04-29/info_16_35_43.log, filename_log_debug: /data/clinical/neural/fr/2020-04-29/debug_16_35_43.log,
  54. filename_events: /data/clinical/neural/fr/2020-04-29/events_16_35_43.txt, filename_config: /data/clinical/neural/fr/2020-04-29/config_16_35_43.yaml,
  55. filename_paradigm: /data/clinical/neural/fr/2020-04-29/paradigm_16_35_43.yaml, filename_config_dump: /data/clinical/neural/fr/2020-04-29/config_dump_16_35_43.yaml,
  56. filename_git_patch: /data/clinical/neural/fr/2020-04-29/git_changes_16_35_43.patch,
  57. filename_history: /data/clinical/neural/fr/2020-04-29/history.bin, filename_corpus: /data/clinical/neural/fr/2020-04-29/user_corpus_16_35_43.txt,
  58. git_hash: 7433eaa}
  59. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  60. recording: !munch.Munch
  61. timing: !munch.Munch {t_after_stimulus: 0.0, t_baseline_1: 5.0, recording_loop_interval: 0.05,
  62. recording_loop_interval_data: 0.02, t_baseline_rand: 1.0, t_response: 5.0, bci_loop_interval: 0.05,
  63. decoder_refresh_interval: 0.01, t_baseline_all: 1.0}
  64. daq: !munch.Munch
  65. spike_band_power: !munch.Munch
  66. integrated_samples: 1500
  67. loop_interval: 50
  68. average_n_bins: 10
  69. sample_group: 6
  70. filter: !munch.Munch
  71. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  72. a: [1, -1.91119706742607, 0.914975834801434]
  73. normalization: !munch.Munch
  74. range: [10, 90]
  75. clamp_firing_rates: true
  76. update_interval: 10.0
  77. channels:
  78. - !munch.Munch {id: 23, bottom: 3, top: 6, invert: false}
  79. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  80. use_all_channels: false
  81. do_update: false
  82. len: 600.0
  83. data_source: spike_rates
  84. smpl_fct: 30
  85. car_channels: []
  86. n_channels_max: 128
  87. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  88. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  89. daq_sleep: 0.1
  90. exclude_channels: []
  91. trigger_len: 50
  92. fs: 30000.0
  93. n_channels: 128
  94. sim_data: !munch.Munch {rate_bl: 10}
  95. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback_wo_reward.yaml]
  96. paradigms: !munch.Munch
  97. exploration: !munch.Munch
  98. mode: [Screening]
  99. selected_mode: 0
  100. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  101. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  102. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  103. audio_path: /kiap/data/speller/Audio/exploration
  104. number_of_stim: 5
  105. training_color: !munch.Munch
  106. mode: [Training]
  107. selected_mode: 0
  108. states:
  109. - - gelb
  110. - [E, A, D, C, B, F, ^]
  111. - - gruen
  112. - [N, S, R, O, M, P, Q, ^]
  113. - - rot
  114. - [I, H, L, G, K, J, ^]
  115. - - blau
  116. - [T, U, W, Z, V, Y, X, ^]
  117. - - weiss
  118. - [<, <<<, ., '?', word, end, ^]
  119. training_string: Gustav
  120. confirmation_yes: 1
  121. confirmation_no: 1
  122. feedback: !munch.Munch
  123. play_end_feedback: !munch.Munch {fail: false, success: false}
  124. selected_mode: 0
  125. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  126. number_of_stim: 10
  127. mode: [Training, Validation]
  128. states: !munch.Munch
  129. up: [1.0, 0.7, 1.0]
  130. down: [0.0, 0.0, 0.3]
  131. audio_path: /kiap/data/speller/feedback/
  132. symmetrical: true
  133. question: !munch.Munch
  134. mode: [Training, Validation, Free]
  135. selected_mode: 1
  136. audio_path: /kiap/data/speller/Audio/question
  137. number_of_stim: 10
  138. symmetrical: true
  139. color: !munch.Munch
  140. mode: [Validation, Free]
  141. selected_mode: 1
  142. states:
  143. - - gelb
  144. - [E, A, D, C, B, F, ^]
  145. - - gruen
  146. - [N, S, R, O, M, P, Q, ^]
  147. - - rot
  148. - [I, H, L, G, K, J, ^]
  149. - - blau
  150. - [T, U, W, Z, V, Y, X, ^]
  151. - - weiss
  152. - [<, ' ', <<<, ., end, ^]
  153. max_length_vocabulary: 5
  154. confirmation_num_yes: 2
  155. confirmation_num_no: 1
  156. opposite_answers_methods: [last, majority]
  157. selected_opposite_answers_method: 0
  158. corpora_path: /kiap/data/speller/Corpora
  159. audio_path: /kiap/data/speller/Audio
  160. general_corpus: cfd_leipzig.p
  161. general_user_corpus: general_user_cfd.txt
  162. speller_user_corpus: speller_user.txt
  163. word_prediction: true
  164. validation_string: ''
  165. init_string: ''
  166. n_repeat_unclassified: 1
  167. variablesToShowInGUI: !munch.Munch
  168. variableGroups: [timing, color]
  169. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  170. t: 1
  171. session: !munch.Munch
  172. flags: !munch.Munch {decode: false, bl: true, stimulus: true, bl_rand: false}
  173. general: !munch.Munch {debug: 1, clear_trial_history: false}
  174. lfp: !munch.Munch
  175. fs: 1000
  176. sampling_ratio: 30
  177. filter_fc_lb: [10, 0]
  178. filter_fc_mb: [12, 40]
  179. filter_fc_hb: [60, 250]
  180. filter_order_lb: 2
  181. filter_order_mb: 6
  182. filter_order_hb: 10
  183. artifact_thr: 400
  184. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  185. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  186. array21: [0, 1]
  187. array22: []
  188. array1_exclude: []
  189. array2_exclude: []
  190. i_start: 0
  191. i_stop: -1
  192. psth_win: [-1000, 5000]
  193. exclude: false
  194. normalize: false
  195. zscore: false
  196. car: true
  197. sub_band: 1
  198. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  199. spectra: !munch.Munch {spgr_len: 500}
  200. plot: !munch.Munch
  201. ch_ids: [0]
  202. general: true
  203. filters: false
  204. array2: [0, 1]
  205. system: !munch.Munch {plot: 0}
  206. feedback: !munch.Munch {hold_iterations: 2, beta: 120, target_tone_length: 1.0, alpha: 360,
  207. target_n_tones: 5, feedback_tone: true, tone_length: 0.25}
  208. plot: !munch.Munch
  209. fps: 10.0
  210. pca: false
  211. channels: [20, 96, 109]
  212. filter_min_rate: 2
  213. speller: !munch.Munch {type: feedback, audio_result_fb: false, pyttsx_rate: 100, audio: true,
  214. speller_matrix: true}