config_dump_16_25_54.yaml 8.0 KB

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  1. !munch.Munch
  2. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  3. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-04-28,
  4. filename_data: /data/clinical/neural/fr/2020-04-28/data_16_25_54.bin, filename_baseline: /data/clinical/neural/fr/2020-04-28/bl_16_25_54.npy,
  5. filename_log_info: /data/clinical/neural/fr/2020-04-28/info_16_25_54.log, filename_log_debug: /data/clinical/neural/fr/2020-04-28/debug_16_25_54.log,
  6. filename_events: /data/clinical/neural/fr/2020-04-28/events_16_25_54.txt, filename_config: /data/clinical/neural/fr/2020-04-28/config_16_25_54.yaml,
  7. filename_paradigm: /data/clinical/neural/fr/2020-04-28/paradigm_16_25_54.yaml, filename_config_dump: /data/clinical/neural/fr/2020-04-28/config_dump_16_25_54.yaml,
  8. filename_git_patch: /data/clinical/neural/fr/2020-04-28/git_changes_16_25_54.patch,
  9. filename_history: /data/clinical/neural/fr/2020-04-28/history.bin, filename_corpus: /data/clinical/neural/fr/2020-04-28/user_corpus_16_25_54.txt,
  10. git_hash: 7433eaa}
  11. lfp: !munch.Munch
  12. fs: 1000
  13. sampling_ratio: 30
  14. filter_fc_lb: [10, 0]
  15. filter_fc_mb: [12, 40]
  16. filter_fc_hb: [60, 250]
  17. filter_order_lb: 2
  18. filter_order_mb: 6
  19. filter_order_hb: 10
  20. artifact_thr: 400
  21. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  22. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  23. array21: [0, 1]
  24. array22: []
  25. array1_exclude: []
  26. array2_exclude: []
  27. i_start: 0
  28. i_stop: -1
  29. psth_win: [-1000, 5000]
  30. exclude: false
  31. normalize: false
  32. zscore: false
  33. car: true
  34. sub_band: 1
  35. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  36. spectra: !munch.Munch {spgr_len: 500}
  37. plot: !munch.Munch
  38. ch_ids: [0]
  39. general: true
  40. filters: false
  41. array2: [0, 1]
  42. plot: !munch.Munch
  43. channels: [20, 96, 109]
  44. pca: false
  45. fps: 10.0
  46. filter_min_rate: 2
  47. paradigms: !munch.Munch
  48. question: !munch.Munch
  49. mode: [Training, Validation, Free]
  50. selected_mode: 1
  51. audio_path: /kiap/data/speller/Audio/question
  52. number_of_stim: 10
  53. symmetrical: true
  54. color: !munch.Munch
  55. mode: [Validation, Free]
  56. selected_mode: 1
  57. states:
  58. - - gelb
  59. - [E, A, D, C, B, F, ^]
  60. - - gruen
  61. - [N, S, R, O, M, P, Q, ^]
  62. - - rot
  63. - [I, H, L, G, K, J, ^]
  64. - - blau
  65. - [T, U, W, Z, V, Y, X, ^]
  66. - - weiss
  67. - [<, ' ', <<<, ., end, ^]
  68. max_length_vocabulary: 5
  69. confirmation_num_yes: 2
  70. confirmation_num_no: 1
  71. opposite_answers_methods: [last, majority]
  72. selected_opposite_answers_method: 0
  73. corpora_path: /kiap/data/speller/Corpora
  74. audio_path: /kiap/data/speller/Audio
  75. general_corpus: cfd_leipzig.p
  76. general_user_corpus: general_user_cfd.txt
  77. speller_user_corpus: speller_user.txt
  78. word_prediction: true
  79. validation_string: ''
  80. init_string: ''
  81. n_repeat_unclassified: 1
  82. feedback: !munch.Munch
  83. states: !munch.Munch
  84. up: [1.0, 0.7, 1.0]
  85. down: [0.0, 0.0, 0.3]
  86. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  87. symmetrical: true
  88. number_of_stim: 10
  89. mode: [Training, Validation]
  90. play_end_feedback: !munch.Munch {success: true, fail: true}
  91. selected_mode: 0
  92. audio_path: /kiap/data/speller/feedback/
  93. variablesToShowInGUI: !munch.Munch
  94. variableGroups: [timing, color]
  95. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  96. t: 1
  97. exploration: !munch.Munch
  98. mode: [Screening]
  99. selected_mode: 0
  100. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  101. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  102. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  103. audio_path: /kiap/data/speller/Audio/exploration
  104. number_of_stim: 5
  105. training_color: !munch.Munch
  106. mode: [Training]
  107. selected_mode: 0
  108. states:
  109. - - gelb
  110. - [E, A, D, C, B, F, ^]
  111. - - gruen
  112. - [N, S, R, O, M, P, Q, ^]
  113. - - rot
  114. - [I, H, L, G, K, J, ^]
  115. - - blau
  116. - [T, U, W, Z, V, Y, X, ^]
  117. - - weiss
  118. - [<, <<<, ., '?', word, end, ^]
  119. training_string: Gustav
  120. confirmation_yes: 1
  121. confirmation_no: 1
  122. buffer: !munch.Munch
  123. length: 600
  124. shape: [600, 128]
  125. session: !munch.Munch
  126. flags: !munch.Munch {bl_rand: true, decode: false, bl: true, stimulus: true}
  127. sim_data: !munch.Munch {rate_bl: 10}
  128. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback.yaml]
  129. feedback: !munch.Munch {tone_length: 0.25, target_n_tones: 5, hold_iterations: 2,
  130. beta: 120, feedback_tone: true, alpha: 360, target_tone_length: 1.0}
  131. speller: !munch.Munch {audio: true, audio_result_fb: false, pyttsx_rate: 100, type: feedback,
  132. speller_matrix: true}
  133. general: !munch.Munch {debug: 1, clear_trial_history: false}
  134. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  135. recording: !munch.Munch
  136. timing: !munch.Munch {recording_loop_interval_data: 0.02, t_response: 5.0, decoder_refresh_interval: 0.01,
  137. t_baseline_1: 5.0, t_after_stimulus: 0.2, t_baseline_rand: 1.0, recording_loop_interval: 0.05,
  138. bci_loop_interval: 0.05, t_baseline_all: 1.0}
  139. system: !munch.Munch {plot: 0}
  140. daq: !munch.Munch
  141. exclude_channels: []
  142. spike_band_power: !munch.Munch
  143. loop_interval: 50
  144. integrated_samples: 1500
  145. sample_group: 6
  146. average_n_bins: 10
  147. filter: !munch.Munch
  148. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  149. a: [1, -1.91119706742607, 0.914975834801434]
  150. smpl_fct: 30
  151. n_channels_max: 128
  152. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  153. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  154. fs: 30000.0
  155. car_channels: []
  156. data_source: spike_rates
  157. trigger_len: 50
  158. normalization: !munch.Munch
  159. update_interval: 10.0
  160. do_update: false
  161. len: 600.0
  162. clamp_firing_rates: true
  163. use_all_channels: false
  164. channels:
  165. - !munch.Munch {id: 14, bottom: 2.5, top: 5.0, invert: false}
  166. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  167. range: [10, 90]
  168. daq_sleep: 0.1
  169. n_channels: 128
  170. classifier: !munch.Munch
  171. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  172. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  173. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  174. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  175. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  176. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  177. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  178. thr_prob: 0.8
  179. break_loop: true
  180. thr_window: 40
  181. trigger_pos: start
  182. n_neg_train: 100000
  183. n_triggers: 2
  184. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  185. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  186. max_active_ch_nr: []
  187. n_classes: 2
  188. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  189. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  190. exclude_data_channels: []
  191. deadtime: 40
  192. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  193. args:
  194. - !!python/name:numpy.ndarray ''
  195. - !!python/tuple [0]
  196. - !!binary |
  197. Yg==
  198. state: !!python/tuple
  199. - 1
  200. - !!python/tuple [8]
  201. - !!python/object/apply:numpy.dtype
  202. args: [i8, 0, 1]
  203. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  204. - false
  205. - !!binary |
  206. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  207. AAAAAAAAAA==
  208. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  209. psth: !munch.Munch
  210. cut: [-40, 100]
  211. include_channels: [20]
  212. online: false
  213. saved_model_conf_name: config/model_conf.yaml
  214. n_features: 1024