config_dump_16_11_27.yaml 8.0 KB

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  1. !munch.Munch
  2. feedback: !munch.Munch {alpha: 360, beta: 120, target_n_tones: 5, tone_length: 0.25,
  3. feedback_tone: true, target_tone_length: 1.0, hold_iterations: 2}
  4. lfp: !munch.Munch
  5. fs: 1000
  6. sampling_ratio: 30
  7. filter_fc_lb: [10, 0]
  8. filter_fc_mb: [12, 40]
  9. filter_fc_hb: [60, 250]
  10. filter_order_lb: 2
  11. filter_order_mb: 6
  12. filter_order_hb: 10
  13. artifact_thr: 400
  14. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  15. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  16. array21: [0, 1]
  17. array22: []
  18. array1_exclude: []
  19. array2_exclude: []
  20. i_start: 0
  21. i_stop: -1
  22. psth_win: [-1000, 5000]
  23. exclude: false
  24. normalize: false
  25. zscore: false
  26. car: true
  27. sub_band: 1
  28. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  29. spectra: !munch.Munch {spgr_len: 500}
  30. plot: !munch.Munch
  31. ch_ids: [0]
  32. general: true
  33. filters: false
  34. array2: [0, 1]
  35. speller: !munch.Munch {audio: true, pyttsx_rate: 100, speller_matrix: true, type: feedback,
  36. audio_result_fb: false}
  37. plot: !munch.Munch
  38. filter_min_rate: 2
  39. fps: 10.0
  40. pca: false
  41. channels: [20, 96, 109]
  42. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback.yaml]
  43. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  44. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-04-28,
  45. filename_data: /data/clinical/neural/fr/2020-04-28/data_16_11_27.bin, filename_baseline: /data/clinical/neural/fr/2020-04-28/bl_16_11_27.npy,
  46. filename_log_info: /data/clinical/neural/fr/2020-04-28/info_16_11_27.log, filename_log_debug: /data/clinical/neural/fr/2020-04-28/debug_16_11_27.log,
  47. filename_events: /data/clinical/neural/fr/2020-04-28/events_16_11_27.txt, filename_config: /data/clinical/neural/fr/2020-04-28/config_16_11_27.yaml,
  48. filename_paradigm: /data/clinical/neural/fr/2020-04-28/paradigm_16_11_27.yaml, filename_config_dump: /data/clinical/neural/fr/2020-04-28/config_dump_16_11_27.yaml,
  49. filename_git_patch: /data/clinical/neural/fr/2020-04-28/git_changes_16_11_27.patch,
  50. filename_history: /data/clinical/neural/fr/2020-04-28/history.bin, filename_corpus: /data/clinical/neural/fr/2020-04-28/user_corpus_16_11_27.txt,
  51. git_hash: 7433eaa}
  52. recording: !munch.Munch
  53. timing: !munch.Munch {recording_loop_interval_data: 0.02, t_response: 5.0, t_baseline_all: 1.0,
  54. bci_loop_interval: 0.05, t_baseline_rand: 1.0, t_baseline_1: 5.0, recording_loop_interval: 0.05,
  55. t_after_stimulus: 0.2, decoder_refresh_interval: 0.01}
  56. session: !munch.Munch
  57. flags: !munch.Munch {stimulus: true, bl_rand: true, bl: true, decode: false}
  58. paradigms: !munch.Munch
  59. exploration: !munch.Munch
  60. mode: [Screening]
  61. selected_mode: 0
  62. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  63. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  64. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  65. audio_path: /kiap/data/speller/Audio/exploration
  66. number_of_stim: 5
  67. question: !munch.Munch
  68. mode: [Training, Validation, Free]
  69. selected_mode: 1
  70. audio_path: /kiap/data/speller/Audio/question
  71. number_of_stim: 10
  72. symmetrical: true
  73. feedback: !munch.Munch
  74. play_end_feedback: !munch.Munch {fail: true, success: true}
  75. mode: [Training, Validation]
  76. symmetrical: true
  77. audio_path: /kiap/data/speller/feedback/
  78. number_of_stim: 10
  79. selected_mode: 0
  80. states: !munch.Munch
  81. up: [1.0, 0.7, 1.0]
  82. down: [0.0, 0.0, 0.3]
  83. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  84. variablesToShowInGUI: !munch.Munch
  85. variableGroups: [timing, color]
  86. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  87. t: 1
  88. training_color: !munch.Munch
  89. mode: [Training]
  90. selected_mode: 0
  91. states:
  92. - - gelb
  93. - [E, A, D, C, B, F, ^]
  94. - - gruen
  95. - [N, S, R, O, M, P, Q, ^]
  96. - - rot
  97. - [I, H, L, G, K, J, ^]
  98. - - blau
  99. - [T, U, W, Z, V, Y, X, ^]
  100. - - weiss
  101. - [<, <<<, ., '?', word, end, ^]
  102. training_string: Gustav
  103. confirmation_yes: 1
  104. confirmation_no: 1
  105. color: !munch.Munch
  106. mode: [Validation, Free]
  107. selected_mode: 1
  108. states:
  109. - - gelb
  110. - [E, A, D, C, B, F, ^]
  111. - - gruen
  112. - [N, S, R, O, M, P, Q, ^]
  113. - - rot
  114. - [I, H, L, G, K, J, ^]
  115. - - blau
  116. - [T, U, W, Z, V, Y, X, ^]
  117. - - weiss
  118. - [<, ' ', <<<, ., end, ^]
  119. max_length_vocabulary: 5
  120. confirmation_num_yes: 2
  121. confirmation_num_no: 1
  122. opposite_answers_methods: [last, majority]
  123. selected_opposite_answers_method: 0
  124. corpora_path: /kiap/data/speller/Corpora
  125. audio_path: /kiap/data/speller/Audio
  126. general_corpus: cfd_leipzig.p
  127. general_user_corpus: general_user_cfd.txt
  128. speller_user_corpus: speller_user.txt
  129. word_prediction: true
  130. validation_string: ''
  131. init_string: ''
  132. n_repeat_unclassified: 1
  133. system: !munch.Munch {plot: 0}
  134. general: !munch.Munch {debug: 1, clear_trial_history: false}
  135. sim_data: !munch.Munch {rate_bl: 10}
  136. classifier: !munch.Munch
  137. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  138. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  139. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  140. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  141. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  142. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  143. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  144. thr_prob: 0.8
  145. trigger_pos: start
  146. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  147. max_active_ch_nr: []
  148. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  149. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  150. deadtime: 40
  151. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  152. include_channels: [20]
  153. n_neg_train: 100000
  154. saved_model_conf_name: config/model_conf.yaml
  155. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  156. online: false
  157. thr_window: 40
  158. exclude_data_channels: []
  159. n_triggers: 2
  160. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  161. args:
  162. - !!python/name:numpy.ndarray ''
  163. - !!python/tuple [0]
  164. - !!binary |
  165. Yg==
  166. state: !!python/tuple
  167. - 1
  168. - !!python/tuple [8]
  169. - !!python/object/apply:numpy.dtype
  170. args: [i8, 0, 1]
  171. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  172. - false
  173. - !!binary |
  174. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  175. AAAAAAAAAA==
  176. n_classes: 2
  177. break_loop: true
  178. psth: !munch.Munch
  179. cut: [-40, 100]
  180. n_features: 1024
  181. daq: !munch.Munch
  182. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  183. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  184. trigger_len: 50
  185. normalization: !munch.Munch
  186. len: 600.0
  187. do_update: false
  188. range: [10, 90]
  189. update_interval: 10.0
  190. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  191. use_all_channels: false
  192. clamp_firing_rates: true
  193. channels:
  194. - !munch.Munch {id: 20, bottom: 2, top: 4, invert: true}
  195. daq_sleep: 0.1
  196. exclude_channels: []
  197. data_source: spike_rates
  198. n_channels_max: 128
  199. fs: 30000.0
  200. spike_band_power: !munch.Munch
  201. sample_group: 6
  202. average_n_bins: 10
  203. filter: !munch.Munch
  204. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  205. a: [1, -1.91119706742607, 0.914975834801434]
  206. integrated_samples: 1500
  207. loop_interval: 50
  208. car_channels: []
  209. smpl_fct: 30
  210. n_channels: 128
  211. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  212. buffer: !munch.Munch
  213. length: 600
  214. shape: [600, 128]