config_dump_21_17_47.yaml 7.8 KB

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  1. !munch.Munch
  2. classifier: !munch.Munch
  3. thr_prob: 0.8
  4. exclude_data_channels: []
  5. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  6. saved_model_conf_name: config/model_conf.yaml
  7. n_neg_train: 100000
  8. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  9. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  10. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  11. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  12. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  13. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  14. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  15. thr_window: 40
  16. include_channels: [20]
  17. n_classes: 2
  18. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  19. args:
  20. - !!python/name:numpy.ndarray ''
  21. - !!python/tuple [0]
  22. - !!binary |
  23. Yg==
  24. state: !!python/tuple
  25. - 1
  26. - !!python/tuple [8]
  27. - !!python/object/apply:numpy.dtype
  28. args: [i8, 0, 1]
  29. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  30. - false
  31. - !!binary |
  32. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  33. AAAAAAAAAA==
  34. deadtime: 40
  35. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  36. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  37. psth: !munch.Munch
  38. cut: [-40, 100]
  39. break_loop: true
  40. trigger_pos: start
  41. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  42. max_active_ch_nr: []
  43. online: false
  44. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  45. n_triggers: 2
  46. n_features: 1024
  47. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback.yaml]
  48. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  49. speller: !munch.Munch {type: feedback, pyttsx_rate: 100, speller_matrix: true, audio: true,
  50. audio_result_fb: true}
  51. plot: !munch.Munch
  52. filter_min_rate: 2
  53. channels: [96, 98]
  54. fps: 10.0
  55. pca: false
  56. feedback: !munch.Munch {alpha: 360, tone_length: 0.25, hold_iterations: 2, feedback_tone: true,
  57. beta: 120, target_n_tones: 5, target_tone_length: 1.0}
  58. system: !munch.Munch {plot: 0}
  59. lfp: !munch.Munch
  60. fs: 1000
  61. sampling_ratio: 30
  62. filter_fc_lb: [10, 0]
  63. filter_fc_mb: [12, 40]
  64. filter_fc_hb: [60, 250]
  65. filter_order_lb: 2
  66. filter_order_mb: 6
  67. filter_order_hb: 10
  68. artifact_thr: 400
  69. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  70. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  71. array21: [0, 1]
  72. array22: []
  73. array1_exclude: []
  74. array2_exclude: []
  75. i_start: 0
  76. i_stop: -1
  77. psth_win: [-1000, 5000]
  78. exclude: false
  79. normalize: false
  80. zscore: false
  81. car: true
  82. sub_band: 1
  83. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  84. spectra: !munch.Munch {spgr_len: 500}
  85. plot: !munch.Munch
  86. ch_ids: [0]
  87. general: true
  88. filters: false
  89. array2: [0, 1]
  90. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  91. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-02-19,
  92. filename_data: /data/clinical/neural/fr/2020-02-19/data_21_17_47.bin, filename_baseline: /data/clinical/neural/fr/2020-02-19/bl_21_17_47.npy,
  93. filename_log_info: /data/clinical/neural/fr/2020-02-19/info_21_17_47.log, filename_log_debug: /data/clinical/neural/fr/2020-02-19/debug_21_17_47.log,
  94. filename_events: /data/clinical/neural/fr/2020-02-19/events_21_17_47.txt, filename_config: /data/clinical/neural/fr/2020-02-19/config_21_17_47.yaml,
  95. filename_paradigm: /data/clinical/neural/fr/2020-02-19/paradigm_21_17_47.yaml, filename_config_dump: /data/clinical/neural/fr/2020-02-19/config_dump_21_17_47.yaml,
  96. filename_git_patch: /data/clinical/neural/fr/2020-02-19/git_changes_21_17_47.patch,
  97. filename_history: /data/clinical/neural/fr/2020-02-19/history.bin, git_hash: 52c204f}
  98. paradigms: !munch.Munch
  99. exploration: !munch.Munch
  100. mode: [Screening]
  101. selected_mode: 0
  102. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  103. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  104. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  105. audio_path: /kiap/data/speller/Audio/exploration
  106. number_of_stim: 5
  107. color: !munch.Munch
  108. mode: [Validation, Free]
  109. selected_mode: 1
  110. states:
  111. - - gelb
  112. - [E, A, D, C, B, F, ^]
  113. - - gruen
  114. - [N, S, R, O, M, P, Q, ^]
  115. - - rot
  116. - [I, H, L, G, K, J, ^]
  117. - - blau
  118. - [T, U, W, Z, V, Y, X, ^]
  119. - - weiss
  120. - [<, ' ', end, ^]
  121. max_length_vocabulary: 5
  122. confirmation_methods: [single, double_yes, best_of_three]
  123. selected_confirmation_method: 0
  124. corpora_path: /kiap/data/speller/Corpora
  125. audio_path: /kiap/data/speller/Audio
  126. general_corpus: cfd_tiger.p
  127. general_user_corpus: general_user_cfd.txt
  128. speller_user_corpus: speller_user.txt
  129. word_prediction: false
  130. validation_string: ''
  131. init_string: ''
  132. n_repeat_unclassified: 1
  133. training_color: !munch.Munch
  134. mode: [Training]
  135. selected_mode: 0
  136. states:
  137. - - gelb
  138. - [E, A, D, C, B, F, ^]
  139. - - gruen
  140. - [N, S, R, O, M, P, Q, ^]
  141. - - rot
  142. - [I, H, L, G, K, J, ^]
  143. - - blau
  144. - [T, U, W, Z, V, Y, X, ^]
  145. - - weiss
  146. - [<, ' ', '?', word, end, ^]
  147. training_string: Gustav
  148. confirmation_yes: 1
  149. confirmation_no: 1
  150. feedback: !munch.Munch
  151. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  152. selected_mode: 0
  153. number_of_stim: 10
  154. play_end_feedback: !munch.Munch {success: true, fail: true}
  155. audio_path: /kiap/data/speller/feedback/
  156. symmetrical: true
  157. states: !munch.Munch
  158. down: [0.0, 0.0, 0.3]
  159. up: [1.0, 0.7, 1.0]
  160. mode: [Training, Validation]
  161. variablesToShowInGUI: !munch.Munch
  162. variableGroups: [timing, color]
  163. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  164. t: 1
  165. question: !munch.Munch
  166. mode: [Training, Validation, Free]
  167. selected_mode: 2
  168. audio_path: /kiap/data/speller/Audio/question
  169. number_of_stim: 10
  170. symmetrical: true
  171. recording: !munch.Munch
  172. timing: !munch.Munch {t_baseline_all: 1.0, t_baseline_1: 5.0, t_response: 5.0, t_after_stimulus: 0.2,
  173. t_baseline_rand: 1.0, recording_loop_interval_data: 0.02, decoder_refresh_interval: 0.01,
  174. recording_loop_interval: 0.05, bci_loop_interval: 0.05}
  175. sim_data: !munch.Munch {rate_bl: 10}
  176. session: !munch.Munch
  177. flags: !munch.Munch {bl_rand: true, stimulus: true, bl: true, decode: false}
  178. buffer: !munch.Munch
  179. length: 600
  180. shape: [600, 128]
  181. daq: !munch.Munch
  182. daq_sleep: 0.1
  183. spike_band_power: !munch.Munch
  184. filter: !munch.Munch
  185. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  186. a: [1, -1.91119706742607, 0.914975834801434]
  187. integrated_samples: 1500
  188. average_n_bins: 10
  189. loop_interval: 50
  190. sample_group: 6
  191. normalization: !munch.Munch
  192. update_interval: 10.0
  193. len: 600.0
  194. do_update: false
  195. clamp_firing_rates: true
  196. use_all_channels: false
  197. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  198. range: [10, 90]
  199. channels:
  200. - !munch.Munch {id: 97, bottom: 5.0, top: 9.0, invert: false}
  201. fs: 30000.0
  202. trigger_len: 50
  203. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  204. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  205. data_source: spike_rates
  206. exclude_channels: []
  207. n_channels_max: 128
  208. smpl_fct: 30
  209. car_channels: []
  210. n_channels: 128
  211. general: !munch.Munch {debug: 1, clear_trial_history: false}