config_dump_21_20_57.yaml 7.8 KB

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  1. !munch.Munch
  2. paradigms: !munch.Munch
  3. training_color: !munch.Munch
  4. mode: [Training]
  5. selected_mode: 0
  6. states:
  7. - - gelb
  8. - [E, A, D, C, B, F, ^]
  9. - - gruen
  10. - [N, S, R, O, M, P, Q, ^]
  11. - - rot
  12. - [I, H, L, G, K, J, ^]
  13. - - blau
  14. - [T, U, W, Z, V, Y, X, ^]
  15. - - weiss
  16. - [<, ' ', '?', word, end, ^]
  17. training_string: Gustav
  18. confirmation_yes: 1
  19. confirmation_no: 1
  20. question: !munch.Munch
  21. mode: [Training, Validation, Free]
  22. selected_mode: 2
  23. audio_path: /kiap/data/speller/Audio/question
  24. number_of_stim: 10
  25. symmetrical: true
  26. color: !munch.Munch
  27. mode: [Validation, Free]
  28. selected_mode: 1
  29. states:
  30. - - gelb
  31. - [E, A, D, C, B, F, ^]
  32. - - gruen
  33. - [N, S, R, O, M, P, Q, ^]
  34. - - rot
  35. - [I, H, L, G, K, J, ^]
  36. - - blau
  37. - [T, U, W, Z, V, Y, X, ^]
  38. - - weiss
  39. - [<, ' ', end, ^]
  40. max_length_vocabulary: 5
  41. confirmation_methods: [single, double_yes, best_of_three]
  42. selected_confirmation_method: 0
  43. corpora_path: /kiap/data/speller/Corpora
  44. audio_path: /kiap/data/speller/Audio
  45. general_corpus: cfd_tiger.p
  46. general_user_corpus: general_user_cfd.txt
  47. speller_user_corpus: speller_user.txt
  48. word_prediction: false
  49. validation_string: ''
  50. init_string: ''
  51. n_repeat_unclassified: 1
  52. feedback: !munch.Munch
  53. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  54. mode: [Training, Validation]
  55. symmetrical: true
  56. audio_path: /kiap/data/speller/feedback/
  57. selected_mode: 0
  58. number_of_stim: 10
  59. play_end_feedback: !munch.Munch {fail: true, success: true}
  60. states: !munch.Munch
  61. up: [1.0, 0.7, 1.0]
  62. down: [0.0, 0.0, 0.3]
  63. variablesToShowInGUI: !munch.Munch
  64. variableGroups: [timing, color]
  65. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  66. t: 1
  67. exploration: !munch.Munch
  68. mode: [Screening]
  69. selected_mode: 0
  70. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  71. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  72. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  73. audio_path: /kiap/data/speller/Audio/exploration
  74. number_of_stim: 5
  75. plot: !munch.Munch
  76. fps: 10.0
  77. pca: false
  78. channels: [96, 98]
  79. filter_min_rate: 2
  80. buffer: !munch.Munch
  81. length: 600
  82. shape: [600, 128]
  83. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  84. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-01-15,
  85. filename_data: /data/clinical/neural/fr/2020-01-15/data_21_20_57.bin, filename_baseline: /data/clinical/neural/fr/2020-01-15/bl_21_20_57.npy,
  86. filename_log_info: /data/clinical/neural/fr/2020-01-15/info_21_20_57.log, filename_log_debug: /data/clinical/neural/fr/2020-01-15/debug_21_20_57.log,
  87. filename_events: /data/clinical/neural/fr/2020-01-15/events_21_20_57.txt, filename_config: /data/clinical/neural/fr/2020-01-15/config_21_20_57.yaml,
  88. filename_paradigm: /data/clinical/neural/fr/2020-01-15/paradigm_21_20_57.yaml, filename_config_dump: /data/clinical/neural/fr/2020-01-15/config_dump_21_20_57.yaml,
  89. filename_git_patch: /data/clinical/neural/fr/2020-01-15/git_changes_21_20_57.patch,
  90. filename_history: /data/clinical/neural/fr/2020-01-15/history.bin, git_hash: 52c204f}
  91. system: !munch.Munch {plot: 0}
  92. general: !munch.Munch {debug: 1, clear_trial_history: false}
  93. sim_data: !munch.Munch {rate_bl: 10}
  94. classifier: !munch.Munch
  95. n_neg_train: 100000
  96. max_active_ch_nr: []
  97. exclude_data_channels: []
  98. thr_window: 40
  99. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  100. args:
  101. - !!python/name:numpy.ndarray ''
  102. - !!python/tuple [0]
  103. - !!binary |
  104. Yg==
  105. state: !!python/tuple
  106. - 1
  107. - !!python/tuple [8]
  108. - !!python/object/apply:numpy.dtype
  109. args: [i8, 0, 1]
  110. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  111. - false
  112. - !!binary |
  113. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  114. AAAAAAAAAA==
  115. saved_model_conf_name: config/model_conf.yaml
  116. online: false
  117. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  118. thr_prob: 0.8
  119. n_classes: 2
  120. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  121. break_loop: true
  122. trigger_pos: start
  123. psth: !munch.Munch
  124. cut: [-40, 100]
  125. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  126. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  127. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  128. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  129. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  130. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  131. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  132. include_channels: [20]
  133. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  134. n_triggers: 2
  135. deadtime: 40
  136. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  137. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  138. n_features: 1024
  139. daq: !munch.Munch
  140. spike_band_power: !munch.Munch
  141. average_n_bins: 10
  142. loop_interval: 50
  143. integrated_samples: 1500
  144. sample_group: 6
  145. filter: !munch.Munch
  146. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  147. a: [1, -1.91119706742607, 0.914975834801434]
  148. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  149. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  150. fs: 30000.0
  151. exclude_channels: []
  152. normalization: !munch.Munch
  153. do_update: false
  154. channels:
  155. - !munch.Munch {id: 20, bottom: 1.5, top: 4.5, invert: true}
  156. update_interval: 10.0
  157. len: 600.0
  158. clamp_firing_rates: true
  159. use_all_channels: false
  160. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  161. range: [10, 90]
  162. data_source: spike_rates
  163. car_channels: []
  164. smpl_fct: 30
  165. n_channels_max: 128
  166. daq_sleep: 0.1
  167. trigger_len: 50
  168. n_channels: 128
  169. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  170. feedback: !munch.Munch {beta: 120, target_n_tones: 5, hold_iterations: 2, tone_length: 0.25,
  171. feedback_tone: true, alpha: 360, target_tone_length: 1.0}
  172. lfp: !munch.Munch
  173. fs: 1000
  174. sampling_ratio: 30
  175. filter_fc_lb: [10, 0]
  176. filter_fc_mb: [12, 40]
  177. filter_fc_hb: [60, 250]
  178. filter_order_lb: 2
  179. filter_order_mb: 6
  180. filter_order_hb: 10
  181. artifact_thr: 400
  182. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  183. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  184. array21: [0, 1]
  185. array22: []
  186. array1_exclude: []
  187. array2_exclude: []
  188. i_start: 0
  189. i_stop: -1
  190. psth_win: [-1000, 5000]
  191. exclude: false
  192. normalize: false
  193. zscore: false
  194. car: true
  195. sub_band: 1
  196. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  197. spectra: !munch.Munch {spgr_len: 500}
  198. plot: !munch.Munch
  199. ch_ids: [0]
  200. general: true
  201. filters: false
  202. array2: [0, 1]
  203. session: !munch.Munch
  204. flags: !munch.Munch {stimulus: true, decode: false, bl_rand: true, bl: true}
  205. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback.yaml]
  206. speller: !munch.Munch {audio_result_fb: true, type: feedback, speller_matrix: true,
  207. pyttsx_rate: 100, audio: true}
  208. recording: !munch.Munch
  209. timing: !munch.Munch {t_baseline_1: 5.0, t_baseline_rand: 1.0, t_response: 5.0,
  210. t_baseline_all: 1.0, decoder_refresh_interval: 0.01, bci_loop_interval: 0.05,
  211. t_after_stimulus: 0.5, recording_loop_interval: 0.05, recording_loop_interval_data: 0.02}