config_dump_13_44_40.yaml 7.8 KB

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  1. !munch.Munch
  2. sim_data: !munch.Munch {rate_bl: 10}
  3. classifier: !munch.Munch
  4. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  5. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  6. args:
  7. - !!python/name:numpy.ndarray ''
  8. - !!python/tuple [0]
  9. - !!binary |
  10. Yg==
  11. state: !!python/tuple
  12. - 1
  13. - !!python/tuple [8]
  14. - !!python/object/apply:numpy.dtype
  15. args: [i8, 0, 1]
  16. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  17. - false
  18. - !!binary |
  19. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  20. AAAAAAAAAA==
  21. n_classes: 2
  22. thr_prob: 0.8
  23. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  24. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  25. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  26. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  27. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  28. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  29. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  30. thr_window: 40
  31. exclude_data_channels: []
  32. deadtime: 40
  33. include_channels: [20]
  34. n_neg_train: 100000
  35. trigger_pos: start
  36. saved_model_conf_name: config/model_conf.yaml
  37. n_triggers: 2
  38. break_loop: true
  39. psth: !munch.Munch
  40. cut: [-40, 100]
  41. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  42. max_active_ch_nr: []
  43. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  44. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  45. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  46. online: false
  47. n_features: 1024
  48. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  49. paradigms: !munch.Munch
  50. variablesToShowInGUI: !munch.Munch
  51. variableGroups: [timing, color]
  52. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  53. t: 1
  54. question: !munch.Munch
  55. mode: [Training, Validation, Free]
  56. selected_mode: 2
  57. audio_path: /kiap/data/speller/Audio/question
  58. number_of_stim: 10
  59. symmetrical: true
  60. feedback: !munch.Munch
  61. selected_mode: 0
  62. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  63. states: !munch.Munch
  64. down: [0.0, 0.0, 0.3]
  65. up: [1.0, 0.7, 1.0]
  66. play_end_feedback: !munch.Munch {fail: true, success: true}
  67. symmetrical: true
  68. number_of_stim: 10
  69. mode: [Training, Validation]
  70. audio_path: /kiap/data/speller/feedback/
  71. training_color: !munch.Munch
  72. mode: [Training]
  73. selected_mode: 0
  74. states:
  75. - - gelb
  76. - [E, A, D, C, B, F, ^]
  77. - - gruen
  78. - [N, S, R, O, M, P, Q, ^]
  79. - - rot
  80. - [I, H, L, G, K, J, ^]
  81. - - blau
  82. - [T, U, W, Z, V, Y, X, ^]
  83. - - weiss
  84. - [<, ' ', '?', word, end, ^]
  85. training_string: Gustav
  86. confirmation_yes: 1
  87. confirmation_no: 1
  88. exploration: !munch.Munch
  89. mode: [Screening]
  90. selected_mode: 0
  91. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  92. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  93. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  94. audio_path: /kiap/data/speller/Audio/exploration
  95. number_of_stim: 5
  96. color: !munch.Munch
  97. mode: [Validation, Free]
  98. selected_mode: 1
  99. states:
  100. - - gelb
  101. - [E, A, D, C, B, F, ^]
  102. - - gruen
  103. - [N, S, R, O, M, P, Q, ^]
  104. - - rot
  105. - [I, H, L, G, K, J, ^]
  106. - - blau
  107. - [T, U, W, Z, V, Y, X, ^]
  108. - - weiss
  109. - [<, ' ', end, ^]
  110. max_length_vocabulary: 5
  111. confirmation_methods: [single, double_yes, best_of_three]
  112. selected_confirmation_method: 1
  113. corpora_path: /kiap/data/speller/Corpora
  114. audio_path: /kiap/data/speller/Audio
  115. general_corpus: cfd_tiger.p
  116. general_user_corpus: general_user_cfd.txt
  117. speller_user_corpus: speller_user.txt
  118. word_prediction: false
  119. validation_string: ''
  120. init_string: ''
  121. n_repeat_unclassified: 1
  122. system: !munch.Munch {plot: 0}
  123. daq: !munch.Munch
  124. trigger_len: 50
  125. normalization: !munch.Munch
  126. use_all_channels: false
  127. update_interval: 10.0
  128. range: [10, 90]
  129. clamp_firing_rates: true
  130. len: 600.0
  131. do_update: false
  132. channels:
  133. - !munch.Munch {id: 20, bottom: 3.0, top: 6.5, invert: true}
  134. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  135. fs: 30000.0
  136. smpl_fct: 30
  137. exclude_channels: []
  138. car_channels: []
  139. daq_sleep: 0.1
  140. n_channels_max: 128
  141. data_source: spike_rates
  142. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  143. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  144. spike_band_power: !munch.Munch
  145. loop_interval: 50
  146. average_n_bins: 10
  147. filter: !munch.Munch
  148. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  149. a: [1, -1.91119706742607, 0.914975834801434]
  150. integrated_samples: 1500
  151. sample_group: 6
  152. n_channels: 128
  153. speller: !munch.Munch {pyttsx_rate: 100, type: feedback, audio: true, speller_matrix: true,
  154. audio_result_fb: true}
  155. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback.yaml]
  156. recording: !munch.Munch
  157. timing: !munch.Munch {t_response: 5.0, t_after_stimulus: 0.5, bci_loop_interval: 0.05,
  158. recording_loop_interval_data: 0.02, decoder_refresh_interval: 0.01, t_baseline_rand: 1.0,
  159. recording_loop_interval: 0.05, t_baseline_1: 5.0, t_baseline_all: 1.0}
  160. buffer: !munch.Munch
  161. length: 600
  162. shape: [600, 128]
  163. feedback: !munch.Munch {tone_length: 0.25, target_n_tones: 5, target_tone_length: 1.0,
  164. beta: 120, alpha: 360, feedback_tone: true, hold_iterations: 2}
  165. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  166. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-01-15,
  167. filename_data: /data/clinical/neural/fr/2020-01-15/data_13_44_40.bin, filename_baseline: /data/clinical/neural/fr/2020-01-15/bl_13_44_40.npy,
  168. filename_log_info: /data/clinical/neural/fr/2020-01-15/info_13_44_40.log, filename_log_debug: /data/clinical/neural/fr/2020-01-15/debug_13_44_40.log,
  169. filename_events: /data/clinical/neural/fr/2020-01-15/events_13_44_40.txt, filename_config: /data/clinical/neural/fr/2020-01-15/config_13_44_40.yaml,
  170. filename_paradigm: /data/clinical/neural/fr/2020-01-15/paradigm_13_44_40.yaml, filename_config_dump: /data/clinical/neural/fr/2020-01-15/config_dump_13_44_40.yaml,
  171. filename_git_patch: /data/clinical/neural/fr/2020-01-15/git_changes_13_44_40.patch,
  172. filename_history: /data/clinical/neural/fr/2020-01-15/history.bin, git_hash: 52c204f}
  173. session: !munch.Munch
  174. flags: !munch.Munch {bl_rand: true, stimulus: true, decode: false, bl: true}
  175. plot: !munch.Munch
  176. filter_min_rate: 2
  177. channels: [96, 98]
  178. fps: 10.0
  179. pca: false
  180. general: !munch.Munch {debug: 1, clear_trial_history: false}
  181. lfp: !munch.Munch
  182. fs: 1000
  183. sampling_ratio: 30
  184. filter_fc_lb: [10, 0]
  185. filter_fc_mb: [12, 40]
  186. filter_fc_hb: [60, 250]
  187. filter_order_lb: 2
  188. filter_order_mb: 6
  189. filter_order_hb: 10
  190. artifact_thr: 400
  191. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  192. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  193. array21: [0, 1]
  194. array22: []
  195. array1_exclude: []
  196. array2_exclude: []
  197. i_start: 0
  198. i_stop: -1
  199. psth_win: [-1000, 5000]
  200. exclude: false
  201. normalize: false
  202. zscore: false
  203. car: true
  204. sub_band: 1
  205. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  206. spectra: !munch.Munch {spgr_len: 500}
  207. plot: !munch.Munch
  208. ch_ids: [0]
  209. general: true
  210. filters: false
  211. array2: [0, 1]