config_dump_20_39_51.yaml 7.9 KB

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  1. !munch.Munch
  2. feedback: !munch.Munch {tone_length: 0.25, target_n_tones: 5, hold_iterations: 2,
  3. target_tone_length: 1.0, feedback_tone: true, beta: 120, alpha: 360}
  4. system: !munch.Munch {plot: 0}
  5. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  6. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2019-10-08,
  7. filename_data: /data/clinical/neural/fr/2019-10-08/data_20_39_51.bin, filename_baseline: /data/clinical/neural/fr/2019-10-08/bl_20_39_51.npy,
  8. filename_log_info: /data/clinical/neural/fr/2019-10-08/info_20_39_51.log, filename_log_debug: /data/clinical/neural/fr/2019-10-08/debug_20_39_51.log,
  9. filename_events: /data/clinical/neural/fr/2019-10-08/events_20_39_51.txt, filename_config: /data/clinical/neural/fr/2019-10-08/config_20_39_51.yaml,
  10. filename_paradigm: /data/clinical/neural/fr/2019-10-08/paradigm_20_39_51.yaml, filename_config_dump: /data/clinical/neural/fr/2019-10-08/config_dump_20_39_51.yaml,
  11. filename_git_patch: /data/clinical/neural/fr/2019-10-08/git_changes_20_39_51.patch,
  12. filename_history: /data/clinical/neural/fr/2019-10-08/history.bin, git_hash: 52c204f}
  13. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  14. daq: !munch.Munch
  15. daq_sleep: 0.1
  16. fs: 30000.0
  17. data_source: spike_rates
  18. smpl_fct: 30
  19. n_channels_max: 128
  20. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  21. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  22. trigger_len: 50
  23. spike_band_power: !munch.Munch
  24. average_n_bins: 10
  25. integrated_samples: 1500
  26. loop_interval: 50
  27. sample_group: 6
  28. filter: !munch.Munch
  29. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  30. a: [1, -1.91119706742607, 0.914975834801434]
  31. normalization: !munch.Munch
  32. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  33. len: 600.0
  34. channels:
  35. - !munch.Munch {id: 20, bottom: 10.0, top: 25.0, invert: true}
  36. do_update: false
  37. range: [10, 90]
  38. use_all_channels: false
  39. clamp_firing_rates: true
  40. update_interval: 10.0
  41. exclude_channels: []
  42. car_channels: []
  43. n_channels: 128
  44. paradigms: !munch.Munch
  45. feedback: !munch.Munch
  46. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  47. selected_mode: 0
  48. number_of_stim: 10
  49. states: !munch.Munch
  50. down: [0.0, 0.0, 0.3]
  51. up: [1.0, 0.7, 1.0]
  52. symmetrical: true
  53. play_end_feedback: !munch.Munch {fail: false, success: false}
  54. mode: [Training, Validation]
  55. audio_path: /kiap/data/speller/feedback/
  56. training_color: !munch.Munch
  57. mode: [Training]
  58. selected_mode: 0
  59. states:
  60. - - gelb
  61. - [E, A, D, C, B, F, ^]
  62. - - gruen
  63. - [N, S, R, O, M, P, Q, ^]
  64. - - rot
  65. - [I, H, L, G, K, J, ^]
  66. - - blau
  67. - [T, U, W, Z, V, Y, X, ^]
  68. - - weiss
  69. - [<, ' ', '?', word, end, ^]
  70. training_string: Gustav
  71. confirmation_yes: 1
  72. confirmation_no: 1
  73. exploration: !munch.Munch
  74. mode: [Screening]
  75. selected_mode: 0
  76. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  77. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  78. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  79. audio_path: /kiap/data/speller/Audio/exploration
  80. number_of_stim: 5
  81. color: !munch.Munch
  82. mode: [Validation, Free]
  83. selected_mode: 1
  84. states:
  85. - - gelb
  86. - [E, A, D, C, B, F, ^]
  87. - - gruen
  88. - [N, S, R, O, M, P, Q, ^]
  89. - - rot
  90. - [I, H, L, G, K, J, ^]
  91. - - blau
  92. - [T, U, W, Z, V, Y, X, ^]
  93. - - weiss
  94. - [<, ' ', end, ^]
  95. max_length_vocabulary: 5
  96. confirmation_methods: [single, double_yes, best_of_three]
  97. selected_confirmation_method: 1
  98. corpora_path: /kiap/data/speller/Corpora
  99. audio_path: /kiap/data/speller/Audio
  100. general_corpus: cfd_tiger.p
  101. general_user_corpus: general_user_cfd.txt
  102. speller_user_corpus: speller_user.txt
  103. word_prediction: false
  104. validation_string: ''
  105. init_string: ''
  106. n_repeat_unclassified: 1
  107. variablesToShowInGUI: !munch.Munch
  108. variableGroups: [timing, color]
  109. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  110. t: 1
  111. question: !munch.Munch
  112. mode: [Training, Validation, Free]
  113. selected_mode: 2
  114. audio_path: /kiap/data/speller/Audio/question
  115. number_of_stim: 10
  116. symmetrical: true
  117. general: !munch.Munch {debug: 1, clear_trial_history: false}
  118. session: !munch.Munch
  119. flags: !munch.Munch {stimulus: true, decode: false, bl_rand: false, bl: true}
  120. recording: !munch.Munch
  121. timing: !munch.Munch {bci_loop_interval: 0.05, t_after_stimulus: 0.0, t_baseline_all: 1.0,
  122. t_baseline_rand: 1.0, t_baseline_1: 5.0, recording_loop_interval_data: 0.02, decoder_refresh_interval: 0.01,
  123. recording_loop_interval: 0.05, t_response: 5.0}
  124. speller: !munch.Munch {pyttsx_rate: 100, audio: true, type: feedback, speller_matrix: true,
  125. audio_result_fb: true}
  126. lfp: !munch.Munch
  127. fs: 1000
  128. sampling_ratio: 30
  129. filter_fc_lb: [10, 0]
  130. filter_fc_mb: [12, 40]
  131. filter_fc_hb: [60, 250]
  132. filter_order_lb: 2
  133. filter_order_mb: 6
  134. filter_order_hb: 10
  135. artifact_thr: 400
  136. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  137. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  138. array21: [0, 1]
  139. array22: []
  140. array1_exclude: []
  141. array2_exclude: []
  142. i_start: 0
  143. i_stop: -1
  144. psth_win: [-1000, 5000]
  145. exclude: false
  146. normalize: false
  147. zscore: false
  148. car: true
  149. sub_band: 1
  150. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  151. spectra: !munch.Munch {spgr_len: 500}
  152. plot: !munch.Munch
  153. ch_ids: [0]
  154. general: true
  155. filters: false
  156. array2: [0, 1]
  157. buffer: !munch.Munch
  158. length: 600
  159. shape: [600, 128]
  160. plot: !munch.Munch
  161. channels: [20, 24, 96]
  162. pca: false
  163. filter_min_rate: 2
  164. fps: 10.0
  165. classifier: !munch.Munch
  166. n_triggers: 2
  167. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  168. args:
  169. - !!python/name:numpy.ndarray ''
  170. - !!python/tuple [0]
  171. - !!binary |
  172. Yg==
  173. state: !!python/tuple
  174. - 1
  175. - !!python/tuple [8]
  176. - !!python/object/apply:numpy.dtype
  177. args: [i8, 0, 1]
  178. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  179. - false
  180. - !!binary |
  181. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  182. AAAAAAAAAA==
  183. saved_model_conf_name: config/model_conf.yaml
  184. n_neg_train: 100000
  185. psth: !munch.Munch
  186. cut: [-40, 100]
  187. deadtime: 40
  188. n_classes: 2
  189. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  190. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  191. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  192. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  193. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  194. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  195. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  196. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  197. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  198. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  199. exclude_data_channels: []
  200. max_active_ch_nr: []
  201. include_channels: [20]
  202. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  203. trigger_pos: start
  204. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  205. thr_window: 40
  206. thr_prob: 0.8
  207. online: false
  208. break_loop: true
  209. n_features: 1024
  210. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback_wo_reward.yaml]
  211. sim_data: !munch.Munch {rate_bl: 10}