config_dump_15_35_48.yaml 7.8 KB

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  1. !munch.Munch
  2. speller: !munch.Munch {audio_result_fb: true, audio: true, speller_matrix: true, type: feedback,
  3. pyttsx_rate: 100}
  4. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  5. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2019-10-01,
  6. filename_data: /data/clinical/neural/fr/2019-10-01/data_15_35_48.bin, filename_baseline: /data/clinical/neural/fr/2019-10-01/bl_15_35_48.npy,
  7. filename_log_info: /data/clinical/neural/fr/2019-10-01/info_15_35_48.log, filename_log_debug: /data/clinical/neural/fr/2019-10-01/debug_15_35_48.log,
  8. filename_events: /data/clinical/neural/fr/2019-10-01/events_15_35_48.txt, filename_config: /data/clinical/neural/fr/2019-10-01/config_15_35_48.yaml,
  9. filename_paradigm: /data/clinical/neural/fr/2019-10-01/paradigm_15_35_48.yaml, filename_config_dump: /data/clinical/neural/fr/2019-10-01/config_dump_15_35_48.yaml,
  10. filename_git_patch: /data/clinical/neural/fr/2019-10-01/git_changes_15_35_48.patch,
  11. filename_history: /data/clinical/neural/fr/2019-10-01/history.bin, git_hash: 52c204f}
  12. session: !munch.Munch
  13. flags: !munch.Munch {stimulus: true, bl: true, decode: false, bl_rand: true}
  14. sim_data: !munch.Munch {rate_bl: 10}
  15. plot: !munch.Munch
  16. channels: [20, 24, 96]
  17. filter_min_rate: 2
  18. pca: false
  19. fps: 10.0
  20. buffer: !munch.Munch
  21. length: 600
  22. shape: [600, 128]
  23. system: !munch.Munch {plot: 0}
  24. classifier: !munch.Munch
  25. deadtime: 40
  26. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  27. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  28. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  29. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  30. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  31. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  32. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  33. max_active_ch_nr: []
  34. thr_prob: 0.8
  35. thr_window: 40
  36. n_classes: 2
  37. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  38. args:
  39. - !!python/name:numpy.ndarray ''
  40. - !!python/tuple [0]
  41. - !!binary |
  42. Yg==
  43. state: !!python/tuple
  44. - 1
  45. - !!python/tuple [8]
  46. - !!python/object/apply:numpy.dtype
  47. args: [i8, 0, 1]
  48. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  49. - false
  50. - !!binary |
  51. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  52. AAAAAAAAAA==
  53. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  54. trigger_pos: start
  55. include_channels: [20]
  56. psth: !munch.Munch
  57. cut: [-40, 100]
  58. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  59. exclude_data_channels: []
  60. n_triggers: 2
  61. online: false
  62. break_loop: true
  63. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  64. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  65. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  66. n_neg_train: 100000
  67. saved_model_conf_name: config/model_conf.yaml
  68. n_features: 1024
  69. feedback: !munch.Munch {tone_length: 0.25, beta: 120, hold_iterations: 2, target_n_tones: 5,
  70. alpha: 360, feedback_tone: true, target_tone_length: 1.0}
  71. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback.yaml]
  72. lfp: !munch.Munch
  73. fs: 1000
  74. sampling_ratio: 30
  75. filter_fc_lb: [10, 0]
  76. filter_fc_mb: [12, 40]
  77. filter_fc_hb: [60, 250]
  78. filter_order_lb: 2
  79. filter_order_mb: 6
  80. filter_order_hb: 10
  81. artifact_thr: 400
  82. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  83. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  84. array21: [0, 1]
  85. array22: []
  86. array1_exclude: []
  87. array2_exclude: []
  88. i_start: 0
  89. i_stop: -1
  90. psth_win: [-1000, 5000]
  91. exclude: false
  92. normalize: false
  93. zscore: false
  94. car: true
  95. sub_band: 1
  96. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  97. spectra: !munch.Munch {spgr_len: 500}
  98. plot: !munch.Munch
  99. ch_ids: [0]
  100. general: true
  101. filters: false
  102. array2: [0, 1]
  103. paradigms: !munch.Munch
  104. variablesToShowInGUI: !munch.Munch
  105. variableGroups: [timing, color]
  106. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  107. t: 1
  108. color: !munch.Munch
  109. mode: [Validation, Free]
  110. selected_mode: 1
  111. states:
  112. - - gelb
  113. - [E, A, D, C, B, F, ^]
  114. - - gruen
  115. - [N, S, R, O, M, P, Q, ^]
  116. - - rot
  117. - [I, H, L, G, K, J, ^]
  118. - - blau
  119. - [T, U, W, Z, V, Y, X, ^]
  120. - - weiss
  121. - [<, ' ', end, ^]
  122. max_length_vocabulary: 5
  123. confirmation_methods: [single, double_yes, best_of_three]
  124. selected_confirmation_method: 1
  125. corpora_path: /kiap/data/speller/Corpora
  126. audio_path: /kiap/data/speller/Audio
  127. general_corpus: cfd_tiger.p
  128. general_user_corpus: general_user_cfd.txt
  129. speller_user_corpus: speller_user.txt
  130. word_prediction: false
  131. validation_string: ''
  132. init_string: ''
  133. n_repeat_unclassified: 1
  134. question: !munch.Munch
  135. mode: [Training, Validation, Free]
  136. selected_mode: 2
  137. audio_path: /kiap/data/speller/Audio/question
  138. number_of_stim: 10
  139. symmetrical: true
  140. training_color: !munch.Munch
  141. mode: [Training]
  142. selected_mode: 0
  143. states:
  144. - - gelb
  145. - [E, A, D, C, B, F, ^]
  146. - - gruen
  147. - [N, S, R, O, M, P, Q, ^]
  148. - - rot
  149. - [I, H, L, G, K, J, ^]
  150. - - blau
  151. - [T, U, W, Z, V, Y, X, ^]
  152. - - weiss
  153. - [<, ' ', '?', word, end, ^]
  154. training_string: Gustav
  155. confirmation_yes: 1
  156. confirmation_no: 1
  157. feedback: !munch.Munch
  158. mode: [Training, Validation]
  159. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  160. selected_mode: 0
  161. symmetrical: true
  162. number_of_stim: 10
  163. audio_path: /kiap/data/speller/feedback/
  164. states: !munch.Munch
  165. up: [1.0, 0.7, 1.0]
  166. down: [0.0, 0.0, 0.3]
  167. play_end_feedback: !munch.Munch {success: true, fail: true}
  168. exploration: !munch.Munch
  169. mode: [Screening]
  170. selected_mode: 0
  171. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  172. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  173. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  174. audio_path: /kiap/data/speller/Audio/exploration
  175. number_of_stim: 5
  176. general: !munch.Munch {debug: 1, clear_trial_history: false}
  177. daq: !munch.Munch
  178. exclude_channels: []
  179. trigger_len: 50
  180. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  181. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  182. car_channels: []
  183. n_channels_max: 128
  184. data_source: spike_rates
  185. normalization: !munch.Munch
  186. update_interval: 10.0
  187. do_update: false
  188. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  189. use_all_channels: false
  190. len: 600.0
  191. range: [10, 90]
  192. channels:
  193. - !munch.Munch {id: 20, bottom: 4.0, top: 9.0, invert: true}
  194. clamp_firing_rates: true
  195. daq_sleep: 0.1
  196. fs: 30000.0
  197. smpl_fct: 30
  198. spike_band_power: !munch.Munch
  199. integrated_samples: 1500
  200. sample_group: 6
  201. average_n_bins: 10
  202. filter: !munch.Munch
  203. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  204. a: [1, -1.91119706742607, 0.914975834801434]
  205. loop_interval: 50
  206. n_channels: 128
  207. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  208. recording: !munch.Munch
  209. timing: !munch.Munch {decoder_refresh_interval: 0.01, t_baseline_1: 5.0, recording_loop_interval: 0.05,
  210. recording_loop_interval_data: 0.02, bci_loop_interval: 0.05, t_baseline_all: 1.0,
  211. t_after_stimulus: 0.5, t_response: 5.0, t_baseline_rand: 1.0}