config_dump_14_01_45.yaml 7.8 KB

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  1. !munch.Munch
  2. plot: !munch.Munch
  3. filter_min_rate: 2
  4. channels: [20, 24]
  5. fps: 10.0
  6. pca: false
  7. lfp: !munch.Munch
  8. fs: 1000
  9. sampling_ratio: 30
  10. filter_fc_lb: [10, 0]
  11. filter_fc_mb: [12, 40]
  12. filter_fc_hb: [60, 250]
  13. filter_order_lb: 2
  14. filter_order_mb: 6
  15. filter_order_hb: 10
  16. artifact_thr: 400
  17. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  18. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  19. array21: [0, 1]
  20. array22: []
  21. array1_exclude: []
  22. array2_exclude: []
  23. i_start: 0
  24. i_stop: -1
  25. psth_win: [-1000, 5000]
  26. exclude: false
  27. normalize: false
  28. zscore: false
  29. car: true
  30. sub_band: 1
  31. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  32. spectra: !munch.Munch {spgr_len: 500}
  33. plot: !munch.Munch
  34. ch_ids: [0]
  35. general: true
  36. filters: false
  37. array2: [0, 1]
  38. feedback: !munch.Munch {beta: 120, target_tone_length: 1.0, hold_iterations: 2, tone_length: 0.25,
  39. target_n_tones: 5, alpha: 360, feedback_tone: true}
  40. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback.yaml]
  41. daq: !munch.Munch
  42. fs: 30000.0
  43. spike_band_power: !munch.Munch
  44. sample_group: 6
  45. average_n_bins: 10
  46. loop_interval: 50
  47. filter: !munch.Munch
  48. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  49. a: [1, -1.91119706742607, 0.914975834801434]
  50. integrated_samples: 1500
  51. trigger_len: 50
  52. car_channels: []
  53. smpl_fct: 30
  54. n_channels_max: 128
  55. exclude_channels: []
  56. daq_sleep: 0.1
  57. data_source: spike_rates
  58. normalization: !munch.Munch
  59. range: [10, 90]
  60. clamp_firing_rates: true
  61. do_update: false
  62. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  63. channels:
  64. - !munch.Munch {id: 20, bottom: 2.0, top: 7.0, invert: true}
  65. update_interval: 10.0
  66. use_all_channels: false
  67. len: 600.0
  68. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  69. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  70. n_channels: 128
  71. recording: !munch.Munch
  72. timing: !munch.Munch {t_baseline_1: 5.0, recording_loop_interval: 0.05, decoder_refresh_interval: 0.01,
  73. t_baseline_rand: 1.0, bci_loop_interval: 0.05, recording_loop_interval_data: 0.02,
  74. t_after_stimulus: 0.5, t_response: 5.0, t_baseline_all: 1.0}
  75. paradigms: !munch.Munch
  76. exploration: !munch.Munch
  77. mode: [Screening]
  78. selected_mode: 0
  79. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  80. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  81. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  82. audio_path: /kiap/data/speller/Audio/exploration
  83. number_of_stim: 5
  84. color: !munch.Munch
  85. mode: [Validation, Free]
  86. selected_mode: 1
  87. states:
  88. - - gelb
  89. - [E, A, D, C, B, F, ^]
  90. - - gruen
  91. - [N, S, R, O, M, P, Q, ^]
  92. - - rot
  93. - [I, H, L, G, K, J, ^]
  94. - - blau
  95. - [T, U, W, Z, V, Y, X, ^]
  96. - - weiss
  97. - [<, ' ', end, ^]
  98. max_length_vocabulary: 5
  99. confirmation_methods: [single, double_yes, best_of_three]
  100. selected_confirmation_method: 0
  101. corpora_path: /kiap/data/speller/Corpora
  102. audio_path: /kiap/data/speller/Audio
  103. general_corpus: cfd_tiger.p
  104. general_user_corpus: general_user_cfd.txt
  105. speller_user_corpus: speller_user.txt
  106. word_prediction: false
  107. validation_string: ''
  108. init_string: ''
  109. n_repeat_unclassified: 1
  110. training_color: !munch.Munch
  111. mode: [Training]
  112. selected_mode: 0
  113. states:
  114. - - gelb
  115. - [E, A, D, C, B, F, ^]
  116. - - gruen
  117. - [N, S, R, O, M, P, Q, ^]
  118. - - rot
  119. - [I, H, L, G, K, J, ^]
  120. - - blau
  121. - [T, U, W, Z, V, Y, X, ^]
  122. - - weiss
  123. - [<, ' ', '?', word, end, ^]
  124. training_string: Gustav
  125. confirmation_yes: 1
  126. confirmation_no: 1
  127. variablesToShowInGUI: !munch.Munch
  128. variableGroups: [timing, color]
  129. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  130. t: 1
  131. question: !munch.Munch
  132. mode: [Training, Validation, Free]
  133. selected_mode: 1
  134. audio_path: /kiap/data/speller/Audio/question
  135. number_of_stim: 10
  136. symmetrical: true
  137. feedback: !munch.Munch
  138. states: !munch.Munch
  139. up: [1.0, 0.7, 1.0]
  140. down: [0.0, 0.0, 0.3]
  141. audio_path: /kiap/data/speller/feedback/
  142. number_of_stim: 10
  143. symmetrical: true
  144. play_end_feedback: !munch.Munch {fail: true, success: true}
  145. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  146. mode: [Training, Validation]
  147. selected_mode: 0
  148. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  149. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2019-09-10,
  150. filename_data: /data/clinical/neural/fr/2019-09-10/data_14_01_45.bin, filename_baseline: /data/clinical/neural/fr/2019-09-10/bl_14_01_45.npy,
  151. filename_log_info: /data/clinical/neural/fr/2019-09-10/info_14_01_45.log, filename_log_debug: /data/clinical/neural/fr/2019-09-10/debug_14_01_45.log,
  152. filename_events: /data/clinical/neural/fr/2019-09-10/events_14_01_45.txt, filename_config: /data/clinical/neural/fr/2019-09-10/config_14_01_45.yaml,
  153. filename_paradigm: /data/clinical/neural/fr/2019-09-10/paradigm_14_01_45.yaml, filename_config_dump: /data/clinical/neural/fr/2019-09-10/config_dump_14_01_45.yaml,
  154. filename_git_patch: /data/clinical/neural/fr/2019-09-10/git_changes_14_01_45.patch,
  155. filename_history: /data/clinical/neural/fr/2019-09-10/history.bin, git_hash: 52c204f}
  156. buffer: !munch.Munch
  157. length: 600
  158. shape: [600, 128]
  159. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  160. general: !munch.Munch {debug: 1, clear_trial_history: false}
  161. system: !munch.Munch {plot: 0}
  162. sim_data: !munch.Munch {rate_bl: 10}
  163. classifier: !munch.Munch
  164. online: false
  165. trigger_pos: start
  166. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  167. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  168. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  169. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  170. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  171. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  172. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  173. max_active_ch_nr: []
  174. n_triggers: 2
  175. n_neg_train: 100000
  176. n_classes: 2
  177. exclude_data_channels: []
  178. thr_window: 40
  179. include_channels: [20]
  180. psth: !munch.Munch
  181. cut: [-40, 100]
  182. deadtime: 40
  183. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  184. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  185. break_loop: true
  186. thr_prob: 0.8
  187. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  188. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  189. args:
  190. - !!python/name:numpy.ndarray ''
  191. - !!python/tuple [0]
  192. - !!binary |
  193. Yg==
  194. state: !!python/tuple
  195. - 1
  196. - !!python/tuple [8]
  197. - !!python/object/apply:numpy.dtype
  198. args: [i8, 0, 1]
  199. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  200. - false
  201. - !!binary |
  202. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  203. AAAAAAAAAA==
  204. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  205. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  206. saved_model_conf_name: config/model_conf.yaml
  207. n_features: 1024
  208. speller: !munch.Munch {audio_result_fb: true, audio: true, type: feedback, speller_matrix: true,
  209. pyttsx_rate: 100}
  210. session: !munch.Munch
  211. flags: !munch.Munch {bl_rand: true, bl: true, decode: false, stimulus: true}