config_dump_17_32_18.yaml 7.9 KB

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  1. !munch.Munch
  2. lfp: !munch.Munch
  3. fs: 1000
  4. sampling_ratio: 30
  5. filter_fc_lb: [10, 0]
  6. filter_fc_mb: [12, 40]
  7. filter_fc_hb: [60, 250]
  8. filter_order_lb: 2
  9. filter_order_mb: 6
  10. filter_order_hb: 10
  11. artifact_thr: 400
  12. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  13. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  14. array21: [0, 1]
  15. array22: []
  16. array1_exclude: []
  17. array2_exclude: []
  18. i_start: 0
  19. i_stop: -1
  20. psth_win: [-1000, 5000]
  21. exclude: false
  22. normalize: false
  23. zscore: false
  24. car: true
  25. sub_band: 1
  26. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  27. spectra: !munch.Munch {spgr_len: 500}
  28. plot: !munch.Munch
  29. ch_ids: [0]
  30. general: true
  31. filters: false
  32. array2: [0, 1]
  33. daq: !munch.Munch
  34. fs: 30000.0
  35. n_channels_max: 128
  36. car_channels: []
  37. smpl_fct: 30
  38. spike_band_power: !munch.Munch
  39. loop_interval: 50
  40. integrated_samples: 1500
  41. filter: !munch.Munch
  42. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  43. a: [1, -1.91119706742607, 0.914975834801434]
  44. average_n_bins: 10
  45. sample_group: 6
  46. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  47. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  48. daq_sleep: 0.1
  49. trigger_len: 50
  50. normalization: !munch.Munch
  51. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  52. use_all_channels: false
  53. clamp_firing_rates: true
  54. len: 600.0
  55. update_interval: 10.0
  56. range: [10, 90]
  57. channels:
  58. - !munch.Munch {id: 20, bottom: 5.1, top: 10.0, invert: true}
  59. do_update: false
  60. data_source: spike_rates
  61. exclude_channels: []
  62. n_channels: 128
  63. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback.yaml]
  64. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  65. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2019-08-26,
  66. filename_data: /data/clinical/neural/fr/2019-08-26/data_17_32_18.bin, filename_baseline: /data/clinical/neural/fr/2019-08-26/bl_17_32_18.npy,
  67. filename_log_info: /data/clinical/neural/fr/2019-08-26/info_17_32_18.log, filename_log_debug: /data/clinical/neural/fr/2019-08-26/debug_17_32_18.log,
  68. filename_events: /data/clinical/neural/fr/2019-08-26/events_17_32_18.txt, filename_config: /data/clinical/neural/fr/2019-08-26/config_17_32_18.yaml,
  69. filename_paradigm: /data/clinical/neural/fr/2019-08-26/paradigm_17_32_18.yaml, filename_config_dump: /data/clinical/neural/fr/2019-08-26/config_dump_17_32_18.yaml,
  70. filename_git_patch: /data/clinical/neural/fr/2019-08-26/git_changes_17_32_18.patch,
  71. filename_history: /data/clinical/neural/fr/2019-08-26/history.bin, git_hash: 6fcc149}
  72. system: !munch.Munch {plot: 0}
  73. sim_data: !munch.Munch {rate_bl: 10}
  74. buffer: !munch.Munch
  75. length: 600
  76. shape: [600, 128]
  77. general: !munch.Munch {debug: 1, clear_trial_history: false}
  78. paradigms: !munch.Munch
  79. color: !munch.Munch
  80. mode: [Validation, Free]
  81. selected_mode: 1
  82. states:
  83. - - gelb
  84. - [E, A, D, C, B, F, ^]
  85. - - gruen
  86. - [N, S, R, O, M, P, Q, ^]
  87. - - rot
  88. - [I, H, L, G, K, J, ^]
  89. - - blau
  90. - [T, U, W, Z, V, Y, X, ^]
  91. - - weiss
  92. - [<, ' ', '?', word, end, ^]
  93. max_length_vocabulary: 5
  94. confirmation_methods: [single, double_yes, best_of_three]
  95. selected_confirmation_method: 0
  96. corpora_path: /kiap/data/speller/Corpora
  97. audio_path: /kiap/data/speller/Audio
  98. general_corpus: cfd_tiger.p
  99. general_user_corpus: general_user_cfd.txt
  100. speller_user_corpus: speller_user.txt
  101. word_prediction: false
  102. validation_string: FELIX.
  103. init_string: ''
  104. n_repeat_unclassified: 1
  105. exploration: !munch.Munch
  106. mode: [Screening]
  107. selected_mode: 0
  108. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  109. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  110. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  111. audio_path: /kiap/data/speller/Audio/exploration
  112. number_of_stim: 5
  113. feedback: !munch.Munch
  114. selected_mode: 0
  115. mode: [Training, Validation]
  116. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  117. play_end_feedback: !munch.Munch {success: true, fail: true}
  118. number_of_stim: 10
  119. audio_path: /kiap/data/speller/feedback/
  120. states: !munch.Munch
  121. down: [0.0, 0.0, 0.3]
  122. up: [1.0, 0.7, 1.0]
  123. symmetrical: true
  124. question: !munch.Munch
  125. mode: [Training, Validation, Free]
  126. selected_mode: 2
  127. audio_path: /kiap/data/speller/Audio/question
  128. number_of_stim: 10
  129. symmetrical: true
  130. training_color: !munch.Munch
  131. mode: [Training]
  132. selected_mode: 0
  133. states:
  134. - - gelb
  135. - [E, A, D, C, B, F, ^]
  136. - - gruen
  137. - [N, S, R, O, M, P, Q, ^]
  138. - - rot
  139. - [I, H, L, G, K, J, ^]
  140. - - blau
  141. - [T, U, W, Z, V, Y, X, ^]
  142. - - weiss
  143. - [<, ' ', '?', word, end, ^]
  144. training_string: Gustav
  145. confirmation_yes: 1
  146. confirmation_no: 1
  147. variablesToShowInGUI: !munch.Munch
  148. variableGroups: [timing, color]
  149. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  150. t: 1
  151. speller: !munch.Munch {audio_result_fb: true, pyttsx_rate: 100, speller_matrix: true,
  152. audio: true, type: feedback}
  153. session: !munch.Munch
  154. flags: !munch.Munch {decode: false, bl: true, stimulus: true, bl_rand: true}
  155. feedback: !munch.Munch {tone_length: 0.25, hold_iterations: 2, beta: 120, alpha: 360,
  156. target_tone_length: 1.0, target_n_tones: 5, feedback_tone: true}
  157. classifier: !munch.Munch
  158. break_loop: true
  159. online: false
  160. n_classes: 2
  161. n_triggers: 2
  162. exclude_data_channels: []
  163. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  164. include_channels: [20]
  165. saved_model_conf_name: config/model_conf.yaml
  166. deadtime: 40
  167. max_active_ch_nr: []
  168. n_neg_train: 100000
  169. thr_window: 40
  170. trigger_pos: start
  171. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  172. args:
  173. - !!python/name:numpy.ndarray ''
  174. - !!python/tuple [0]
  175. - !!binary |
  176. Yg==
  177. state: !!python/tuple
  178. - 1
  179. - !!python/tuple [8]
  180. - !!python/object/apply:numpy.dtype
  181. args: [i8, 0, 1]
  182. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  183. - false
  184. - !!binary |
  185. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  186. AAAAAAAAAA==
  187. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  188. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  189. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  190. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  191. psth: !munch.Munch
  192. cut: [-40, 100]
  193. thr_prob: 0.8
  194. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  195. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  196. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  197. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  198. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  199. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  200. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  201. n_features: 1024
  202. recording: !munch.Munch
  203. timing: !munch.Munch {t_response: 5.0, decoder_refresh_interval: 0.01, t_baseline_all: 1.0,
  204. t_baseline_rand: 1.0, t_after_stimulus: 0.5, recording_loop_interval: 0.05, t_baseline_1: 5.0,
  205. recording_loop_interval_data: 0.02, bci_loop_interval: 0.05}
  206. plot: !munch.Munch
  207. fps: 10.0
  208. pca: false
  209. channels: [20, 24, 99]
  210. filter_min_rate: 2
  211. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}