config_dump_13_43_14.yaml 7.9 KB

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  1. !munch.Munch
  2. lfp: !munch.Munch
  3. fs: 1000
  4. sampling_ratio: 30
  5. filter_fc_lb: [10, 0]
  6. filter_fc_mb: [12, 40]
  7. filter_fc_hb: [60, 250]
  8. filter_order_lb: 2
  9. filter_order_mb: 6
  10. filter_order_hb: 10
  11. artifact_thr: 400
  12. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  13. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  14. array21: [0, 1]
  15. array22: []
  16. array1_exclude: []
  17. array2_exclude: []
  18. i_start: 0
  19. i_stop: -1
  20. psth_win: [-1000, 5000]
  21. exclude: false
  22. normalize: false
  23. zscore: false
  24. car: true
  25. sub_band: 1
  26. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  27. spectra: !munch.Munch {spgr_len: 500}
  28. plot: !munch.Munch
  29. ch_ids: [0]
  30. general: true
  31. filters: false
  32. array2: [0, 1]
  33. system: !munch.Munch {plot: 0}
  34. general: !munch.Munch {debug: 1, clear_trial_history: false}
  35. buffer: !munch.Munch
  36. length: 600
  37. shape: [600, 128]
  38. plot: !munch.Munch
  39. pca: false
  40. fps: 10.0
  41. filter_min_rate: 2
  42. channels: [20, 24, 99]
  43. recording: !munch.Munch
  44. timing: !munch.Munch {t_response: 5.0, decoder_refresh_interval: 0.01, t_after_stimulus: 0.5,
  45. t_baseline_rand: 1.0, recording_loop_interval_data: 0.02, t_baseline_1: 5.0, bci_loop_interval: 0.05,
  46. recording_loop_interval: 0.05, t_baseline_all: 1.0}
  47. paradigms: !munch.Munch
  48. training_color: !munch.Munch
  49. mode: [Training]
  50. selected_mode: 0
  51. states:
  52. - - gelb
  53. - [E, A, D, C, B, F, ^]
  54. - - gruen
  55. - [N, S, R, O, M, P, Q, ^]
  56. - - rot
  57. - [I, H, L, G, K, J, ^]
  58. - - blau
  59. - [T, U, W, Z, V, Y, X, ^]
  60. - - weiss
  61. - [<, ' ', '?', word, end, ^]
  62. training_string: Gustav
  63. confirmation_yes: 1
  64. confirmation_no: 1
  65. question: !munch.Munch
  66. mode: [Training, Validation, Free]
  67. selected_mode: 2
  68. audio_path: /kiap/data/speller/Audio/question
  69. number_of_stim: 10
  70. symmetrical: true
  71. variablesToShowInGUI: !munch.Munch
  72. variableGroups: [timing, color]
  73. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  74. t: 1
  75. color: !munch.Munch
  76. mode: [Validation, Free]
  77. selected_mode: 1
  78. states:
  79. - - gelb
  80. - [E, A, D, C, B, F, ^]
  81. - - gruen
  82. - [N, S, R, O, M, P, Q, ^]
  83. - - rot
  84. - [I, H, L, G, K, J, ^]
  85. - - blau
  86. - [T, U, W, Z, V, Y, X, ^]
  87. - - weiss
  88. - [<, ' ', '?', word, end, ^]
  89. max_length_vocabulary: 5
  90. confirmation_methods: [single, double_yes, best_of_three]
  91. selected_confirmation_method: 0
  92. corpora_path: /kiap/data/speller/Corpora
  93. audio_path: /kiap/data/speller/Audio
  94. general_corpus: cfd_tiger.p
  95. general_user_corpus: general_user_cfd.txt
  96. speller_user_corpus: speller_user.txt
  97. word_prediction: false
  98. validation_string: FELIX.
  99. init_string: ''
  100. n_repeat_unclassified: 1
  101. exploration: !munch.Munch
  102. mode: [Screening]
  103. selected_mode: 0
  104. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  105. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  106. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  107. audio_path: /kiap/data/speller/Audio/exploration
  108. number_of_stim: 5
  109. feedback: !munch.Munch
  110. symmetrical: true
  111. states: !munch.Munch
  112. up: [1.0, 0.7, 1.0]
  113. down: [0.0, 0.0, 0.3]
  114. number_of_stim: 10
  115. play_end_feedback: !munch.Munch {fail: true, success: true}
  116. selected_mode: 0
  117. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  118. audio_path: /kiap/data/speller/feedback/
  119. mode: [Training, Validation]
  120. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  121. speller: !munch.Munch {audio: true, speller_matrix: true, pyttsx_rate: 100, audio_result_fb: true,
  122. type: feedback}
  123. daq: !munch.Munch
  124. fs: 30000.0
  125. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  126. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  127. daq_sleep: 0.1
  128. n_channels_max: 128
  129. trigger_len: 50
  130. exclude_channels: []
  131. smpl_fct: 30
  132. normalization: !munch.Munch
  133. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  134. len: 600.0
  135. clamp_firing_rates: true
  136. do_update: false
  137. use_all_channels: false
  138. update_interval: 10.0
  139. range: [10, 90]
  140. channels:
  141. - !munch.Munch {id: 20, bottom: 5.1, top: 10.0, invert: true}
  142. spike_band_power: !munch.Munch
  143. loop_interval: 50
  144. integrated_samples: 1500
  145. average_n_bins: 10
  146. sample_group: 6
  147. filter: !munch.Munch
  148. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  149. a: [1, -1.91119706742607, 0.914975834801434]
  150. car_channels: []
  151. data_source: spike_rates
  152. n_channels: 128
  153. sim_data: !munch.Munch {rate_bl: 10}
  154. feedback: !munch.Munch {target_tone_length: 1.0, beta: 120, tone_length: 0.25, hold_iterations: 2,
  155. feedback_tone: true, target_n_tones: 5, alpha: 360}
  156. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  157. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2019-08-14,
  158. filename_data: /data/clinical/neural/fr/2019-08-14/data_13_43_14.bin, filename_baseline: /data/clinical/neural/fr/2019-08-14/bl_13_43_14.npy,
  159. filename_log_info: /data/clinical/neural/fr/2019-08-14/info_13_43_14.log, filename_log_debug: /data/clinical/neural/fr/2019-08-14/debug_13_43_14.log,
  160. filename_events: /data/clinical/neural/fr/2019-08-14/events_13_43_14.txt, filename_config: /data/clinical/neural/fr/2019-08-14/config_13_43_14.yaml,
  161. filename_paradigm: /data/clinical/neural/fr/2019-08-14/paradigm_13_43_14.yaml, filename_config_dump: /data/clinical/neural/fr/2019-08-14/config_dump_13_43_14.yaml,
  162. filename_git_patch: /data/clinical/neural/fr/2019-08-14/git_changes_13_43_14.patch,
  163. filename_history: /data/clinical/neural/fr/2019-08-14/history.bin, git_hash: 6fcc149}
  164. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback.yaml]
  165. classifier: !munch.Munch
  166. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  167. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  168. n_classes: 2
  169. saved_model_conf_name: config/model_conf.yaml
  170. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  171. n_triggers: 2
  172. n_neg_train: 100000
  173. max_active_ch_nr: []
  174. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  175. args:
  176. - !!python/name:numpy.ndarray ''
  177. - !!python/tuple [0]
  178. - !!binary |
  179. Yg==
  180. state: !!python/tuple
  181. - 1
  182. - !!python/tuple [8]
  183. - !!python/object/apply:numpy.dtype
  184. args: [i8, 0, 1]
  185. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  186. - false
  187. - !!binary |
  188. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  189. AAAAAAAAAA==
  190. thr_window: 40
  191. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  192. include_channels: [20]
  193. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  194. thr_prob: 0.8
  195. break_loop: true
  196. trigger_pos: start
  197. exclude_data_channels: []
  198. online: false
  199. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  200. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  201. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  202. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  203. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  204. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  205. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  206. deadtime: 40
  207. psth: !munch.Munch
  208. cut: [-40, 100]
  209. n_features: 1024
  210. session: !munch.Munch
  211. flags: !munch.Munch {stimulus: true, bl_rand: true, decode: false, bl: true}