config_dump_15_57_56.yaml 7.9 KB

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  1. !munch.Munch
  2. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  3. classifier: !munch.Munch
  4. thr_window: 40
  5. include_channels: [20]
  6. online: false
  7. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  8. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  9. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  10. args:
  11. - !!python/name:numpy.ndarray ''
  12. - !!python/tuple [0]
  13. - !!binary |
  14. Yg==
  15. state: !!python/tuple
  16. - 1
  17. - !!python/tuple [8]
  18. - !!python/object/apply:numpy.dtype
  19. args: [i8, 0, 1]
  20. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  21. - false
  22. - !!binary |
  23. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  24. AAAAAAAAAA==
  25. trigger_pos: start
  26. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  27. n_classes: 2
  28. break_loop: true
  29. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  30. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  31. exclude_data_channels: []
  32. n_neg_train: 100000
  33. thr_prob: 0.8
  34. saved_model_conf_name: config/model_conf.yaml
  35. psth: !munch.Munch
  36. cut: [-40, 100]
  37. max_active_ch_nr: []
  38. deadtime: 40
  39. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  40. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  41. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  42. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  43. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  44. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  45. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  46. n_triggers: 2
  47. n_features: 1024
  48. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/feedback_wo_reward.yaml]
  49. paradigms: !munch.Munch
  50. training_color: !munch.Munch
  51. mode: [Training]
  52. selected_mode: 0
  53. states:
  54. - - gelb
  55. - [E, A, D, C, B, F, ^]
  56. - - gruen
  57. - [N, S, R, O, M, P, Q, ^]
  58. - - rot
  59. - [I, H, L, G, K, J, ^]
  60. - - blau
  61. - [T, U, W, Z, V, Y, X, ^]
  62. - - weiss
  63. - [<, ' ', '?', word, end, ^]
  64. training_string: Gustav
  65. confirmation_yes: 1
  66. confirmation_no: 1
  67. variablesToShowInGUI: !munch.Munch
  68. variableGroups: [timing, color]
  69. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  70. t: 1
  71. feedback: !munch.Munch
  72. symmetrical: true
  73. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  74. audio_path: /kiap/data/speller/feedback/
  75. mode: [Training, Validation]
  76. selected_mode: 0
  77. number_of_stim: 10
  78. states: !munch.Munch
  79. up: [1.0, 0.7, 1.0]
  80. down: [0.0, 0.0, 0.3]
  81. play_end_feedback: !munch.Munch {fail: false, success: false}
  82. question: !munch.Munch
  83. mode: [Training, Validation, Free]
  84. selected_mode: 1
  85. audio_path: /kiap/data/speller/Audio/question
  86. number_of_stim: 10
  87. symmetrical: true
  88. color: !munch.Munch
  89. mode: [Validation, Free]
  90. selected_mode: 1
  91. states:
  92. - - gelb
  93. - [E, A, D, C, B, F, ^]
  94. - - gruen
  95. - [N, S, R, O, M, P, Q, ^]
  96. - - rot
  97. - [I, H, L, G, K, J, ^]
  98. - - blau
  99. - [T, U, W, Z, V, Y, X, ^]
  100. - - weiss
  101. - [<, ' ', '?', word, end, ^]
  102. max_length_vocabulary: 5
  103. confirmation_methods: [single, double_yes, best_of_three]
  104. selected_confirmation_method: 0
  105. corpora_path: /kiap/data/speller/Corpora
  106. audio_path: /kiap/data/speller/Audio
  107. general_corpus: cfd_tiger.p
  108. general_user_corpus: general_user_cfd.txt
  109. speller_user_corpus: speller_user.txt
  110. word_prediction: true
  111. validation_string: FELIX.
  112. init_string: ''
  113. n_repeat_unclassified: 1
  114. exploration: !munch.Munch
  115. mode: [Screening]
  116. selected_mode: 0
  117. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  118. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  119. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  120. audio_path: /kiap/data/speller/Audio/exploration
  121. number_of_stim: 5
  122. speller: !munch.Munch {audio: true, pyttsx_rate: 100, type: feedback, audio_result_fb: false,
  123. speller_matrix: true}
  124. sim_data: !munch.Munch {rate_bl: 10}
  125. lfp: !munch.Munch
  126. fs: 1000
  127. sampling_ratio: 30
  128. filter_fc_lb: [10, 0]
  129. filter_fc_mb: [12, 40]
  130. filter_fc_hb: [60, 250]
  131. filter_order_lb: 2
  132. filter_order_mb: 6
  133. filter_order_hb: 10
  134. artifact_thr: 400
  135. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  136. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  137. array21: [0, 1]
  138. array22: []
  139. array1_exclude: []
  140. array2_exclude: []
  141. i_start: 0
  142. i_stop: -1
  143. psth_win: [-1000, 5000]
  144. exclude: false
  145. normalize: false
  146. zscore: false
  147. car: true
  148. sub_band: 1
  149. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  150. spectra: !munch.Munch {spgr_len: 500}
  151. plot: !munch.Munch
  152. ch_ids: [0]
  153. general: true
  154. filters: false
  155. array2: [0, 1]
  156. plot: !munch.Munch
  157. fps: 10.0
  158. filter_min_rate: 2
  159. channels: [20, 24, 99]
  160. pca: false
  161. session: !munch.Munch
  162. flags: !munch.Munch {bl: true, decode: false, stimulus: true, bl_rand: false}
  163. general: !munch.Munch {debug: 1, clear_trial_history: false}
  164. daq: !munch.Munch
  165. data_source: spike_rates
  166. car_channels: []
  167. n_channels_max: 128
  168. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  169. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  170. daq_sleep: 0.1
  171. normalization: !munch.Munch
  172. use_all_channels: false
  173. range: [10, 90]
  174. update_interval: 10.0
  175. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  176. clamp_firing_rates: true
  177. len: 600.0
  178. do_update: false
  179. channels:
  180. - !munch.Munch {id: 20, bottom: 5.1, top: 10.0, invert: true}
  181. trigger_len: 50
  182. spike_band_power: !munch.Munch
  183. filter: !munch.Munch
  184. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  185. a: [1, -1.91119706742607, 0.914975834801434]
  186. sample_group: 6
  187. integrated_samples: 1500
  188. loop_interval: 50
  189. average_n_bins: 10
  190. exclude_channels: []
  191. fs: 30000.0
  192. smpl_fct: 30
  193. n_channels: 128
  194. feedback: !munch.Munch {target_n_tones: 5, hold_iterations: 2, target_tone_length: 1.0,
  195. beta: 120, alpha: 360, tone_length: 0.25, feedback_tone: true}
  196. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  197. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2019-08-13,
  198. filename_data: /data/clinical/neural/fr/2019-08-13/data_15_57_56.bin, filename_baseline: /data/clinical/neural/fr/2019-08-13/bl_15_57_56.npy,
  199. filename_log_info: /data/clinical/neural/fr/2019-08-13/info_15_57_56.log, filename_log_debug: /data/clinical/neural/fr/2019-08-13/debug_15_57_56.log,
  200. filename_events: /data/clinical/neural/fr/2019-08-13/events_15_57_56.txt, filename_config: /data/clinical/neural/fr/2019-08-13/config_15_57_56.yaml,
  201. filename_paradigm: /data/clinical/neural/fr/2019-08-13/paradigm_15_57_56.yaml, filename_config_dump: /data/clinical/neural/fr/2019-08-13/config_dump_15_57_56.yaml,
  202. filename_git_patch: /data/clinical/neural/fr/2019-08-13/git_changes_15_57_56.patch,
  203. filename_history: /data/clinical/neural/fr/2019-08-13/history.bin, git_hash: 6fcc149}
  204. system: !munch.Munch {plot: 0}
  205. buffer: !munch.Munch
  206. length: 600
  207. shape: [600, 128]
  208. recording: !munch.Munch
  209. timing: !munch.Munch {t_after_stimulus: 0.0, recording_loop_interval_data: 0.02,
  210. t_baseline_all: 1.0, bci_loop_interval: 0.05, decoder_refresh_interval: 0.01,
  211. t_baseline_rand: 1.0, t_response: 5.0, t_baseline_1: 5.0, recording_loop_interval: 0.05}