config_dump_17_58_46.yaml 7.4 KB

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  1. !munch.Munch
  2. paradigms: !munch.Munch
  3. training_color: !munch.Munch
  4. mode: [Training]
  5. selected_mode: 0
  6. states:
  7. - - gelb
  8. - [E, A, D, C, B, F, ^]
  9. - - gruen
  10. - [N, S, R, O, M, P, Q, ^]
  11. - - rot
  12. - [I, H, L, G, K, J, ^]
  13. - - blau
  14. - [T, U, W, Z, V, Y, X, ^]
  15. - - weiss
  16. - [<, ' ', '?', word, end, ^]
  17. training_string: Gustav
  18. confirmation_yes: 1
  19. confirmation_no: 1
  20. color: !munch.Munch
  21. mode: [Validation, Free]
  22. selected_mode: 1
  23. states:
  24. - - gelb
  25. - [E, A, D, C, B, F, ^]
  26. - - gruen
  27. - [N, S, R, O, M, P, Q, ^]
  28. - - rot
  29. - [I, H, L, G, K, J, ^]
  30. - - blau
  31. - [T, U, W, Z, V, Y, X, ^]
  32. - - weiss
  33. - [<, ' ', '?', word, end, ^]
  34. max_length_vocabulary: 5
  35. confirmation_methods: [single, double_yes, best_of_three]
  36. selected_confirmation_method: 0
  37. corpora_path: /kiap/data/speller/Corpora
  38. audio_path: /kiap/data/speller/Audio
  39. general_corpus: cfd_tiger.p
  40. general_user_corpus: general_user_cfd.txt
  41. speller_user_corpus: speller_user.txt
  42. word_prediction: false
  43. validation_string: FELIX.
  44. init_string: ''
  45. n_repeat_unclassified: 1
  46. exploration: !munch.Munch
  47. mode: [Screening]
  48. selected_mode: 0
  49. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  50. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  51. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  52. audio_path: /kiap/data/speller/Audio/exploration
  53. number_of_stim: 5
  54. variablesToShowInGUI: !munch.Munch
  55. variableGroups: [timing, color]
  56. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  57. t: 1
  58. question: !munch.Munch
  59. mode: [Training, Validation, Free]
  60. selected_mode: 2
  61. audio_path: /kiap/data/speller/Audio/question
  62. number_of_stim: 9
  63. symmetrical: true
  64. feedback: !munch.Munch
  65. symmetrical: true
  66. states: !munch.Munch
  67. up: [1.0, 0.7, 1.0]
  68. down: [0.0, 0.0, 0.35]
  69. mode: [Training, Validation]
  70. audio_path: /kiap/data/speller/feedback/
  71. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  72. number_of_stim: 10
  73. play_end_feedback: !munch.Munch {fail: true, success: true}
  74. selected_mode: 1
  75. daq: !munch.Munch
  76. n_channels_max: 128
  77. exclude_channels: []
  78. car_channels: []
  79. fs: 30000.0
  80. smpl_fct: 30
  81. trigger_len: 50
  82. daq_sleep: 0.1
  83. normalization: !munch.Munch
  84. len: 600.0
  85. do_update: false
  86. update_interval: 10.0
  87. range: [10, 90]
  88. clamp_firing_rates: true
  89. use_all_channels: false
  90. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  91. channels:
  92. - !munch.Munch {id: 20, bottom: 5.0, top: 9.0, invert: true}
  93. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  94. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  95. n_channels: 128
  96. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  97. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2019-07-21,
  98. filename_data: /data/clinical/neural/fr/2019-07-21/data_17_58_46.bin, filename_baseline: /data/clinical/neural/fr/2019-07-21/bl_17_58_45.npy,
  99. filename_log_info: /data/clinical/neural/fr/2019-07-21/info_17_58_46.log, filename_log_debug: /data/clinical/neural/fr/2019-07-21/debug_17_58_45.log,
  100. filename_events: /data/clinical/neural/fr/2019-07-21/events_17_58_46.txt, filename_config: /data/clinical/neural/fr/2019-07-21/config_17_58_45.yaml,
  101. filename_paradigm: /data/clinical/neural/fr/2019-07-21/paradigm_17_58_45.yaml, filename_config_dump: /data/clinical/neural/fr/2019-07-21/config_dump_17_58_45.yaml,
  102. filename_git_patch: /data/clinical/neural/fr/2019-07-21/git_changes_17_58_45.patch,
  103. filename_history: /data/clinical/neural/fr/2019-07-21/history.bin, git_hash: e6a266c}
  104. lfp: !munch.Munch
  105. fs: 1000
  106. sampling_ratio: 30
  107. filter_fc_lb: [10, 0]
  108. filter_fc_mb: [12, 40]
  109. filter_fc_hb: [60, 250]
  110. filter_order_lb: 2
  111. filter_order_mb: 6
  112. filter_order_hb: 10
  113. artifact_thr: 400
  114. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  115. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  116. array21: [0, 1]
  117. array22: []
  118. array1_exclude: []
  119. array2_exclude: []
  120. i_start: 0
  121. i_stop: -1
  122. psth_win: [-1000, 5000]
  123. exclude: false
  124. normalize: false
  125. zscore: false
  126. car: true
  127. sub_band: 1
  128. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  129. spectra: !munch.Munch {spgr_len: 500}
  130. plot: !munch.Munch
  131. ch_ids: [0]
  132. general: true
  133. filters: false
  134. array2: [0, 1]
  135. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  136. supplemental_config: [config/feedback.yaml]
  137. sim_data: !munch.Munch {rate_bl: 10}
  138. system: !munch.Munch {plot: 0}
  139. buffer: !munch.Munch
  140. length: 600
  141. shape: [600, 128]
  142. recording: !munch.Munch
  143. timing: !munch.Munch {t_baseline_rand: 1.0, bci_loop_interval: 0.05, t_baseline_all: 1.0,
  144. recording_loop_interval_data: 0.02, t_baseline_1: 5.0, decoder_refresh_interval: 0.01,
  145. recording_loop_interval: 0.05, t_after_stimulus: 0.0, t_response: 5.0}
  146. plot: !munch.Munch
  147. channels: [20]
  148. fps: 10.0
  149. pca: false
  150. filter_min_rate: 2
  151. speller: !munch.Munch {audio_result_fb: true, type: feedback, pyttsx_rate: 100, audio: true}
  152. session: !munch.Munch
  153. flags: !munch.Munch {decode: false, bl: true, bl_rand: true, stimulus: true}
  154. general: !munch.Munch {debug: 1, clear_trial_history: false}
  155. classifier: !munch.Munch
  156. deadtime: 40
  157. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  158. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  159. trigger_pos: start
  160. thr_prob: 0.8
  161. exclude_data_channels: []
  162. break_loop: true
  163. n_neg_train: 100000
  164. thr_window: 40
  165. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  166. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  167. include_channels: [20]
  168. n_triggers: 2
  169. online: false
  170. psth: !munch.Munch
  171. cut: [-40, 100]
  172. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  173. max_active_ch_nr: []
  174. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  175. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  176. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  177. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  178. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  179. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  180. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  181. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  182. args:
  183. - !!python/name:numpy.ndarray ''
  184. - !!python/tuple [0]
  185. - !!binary |
  186. Yg==
  187. state: !!python/tuple
  188. - 1
  189. - !!python/tuple [8]
  190. - !!python/object/apply:numpy.dtype
  191. args: [i8, 0, 1]
  192. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  193. - false
  194. - !!binary |
  195. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  196. AAAAAAAAAA==
  197. n_classes: 2
  198. feedback: !munch.Munch {tone_length: 0.25, feedback_tone: true, beta: 120, target_n_tones: 5,
  199. alpha: 360, target_tone_length: 1.0, hold_iterations: 3}