config_dump_16_46_22.yaml 7.4 KB

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  1. !munch.Munch
  2. lfp: !munch.Munch
  3. fs: 1000
  4. sampling_ratio: 30
  5. filter_fc_lb: [10, 0]
  6. filter_fc_mb: [12, 40]
  7. filter_fc_hb: [60, 250]
  8. filter_order_lb: 2
  9. filter_order_mb: 6
  10. filter_order_hb: 10
  11. artifact_thr: 400
  12. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  13. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  14. array21: [0, 1]
  15. array22: []
  16. array1_exclude: []
  17. array2_exclude: []
  18. i_start: 0
  19. i_stop: -1
  20. psth_win: [-1000, 5000]
  21. exclude: false
  22. normalize: false
  23. zscore: false
  24. car: true
  25. sub_band: 1
  26. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  27. spectra: !munch.Munch {spgr_len: 500}
  28. plot: !munch.Munch
  29. ch_ids: [0]
  30. general: true
  31. filters: false
  32. array2: [0, 1]
  33. recording: !munch.Munch
  34. timing: !munch.Munch {recording_loop_interval_data: 0.02, t_baseline_rand: 1.0,
  35. bci_loop_interval: 0.05, t_baseline_1: 5.0, t_baseline_all: 1.0, t_after_stimulus: 0.0,
  36. decoder_refresh_interval: 0.01, recording_loop_interval: 0.05, t_response: 5.0}
  37. buffer: !munch.Munch
  38. length: 600
  39. shape: [600, 128]
  40. speller: !munch.Munch {audio_result_fb: true, pyttsx_rate: 100, type: feedback, audio: true}
  41. plot: !munch.Munch
  42. channels: [20]
  43. fps: 10.0
  44. pca: false
  45. filter_min_rate: 2
  46. session: !munch.Munch
  47. flags: !munch.Munch {decode: false, bl_rand: true, stimulus: true, bl: true}
  48. system: !munch.Munch {plot: 0}
  49. supplemental_config: [config/feedback.yaml]
  50. paradigms: !munch.Munch
  51. question: !munch.Munch
  52. mode: [Training, Validation, Free]
  53. selected_mode: 2
  54. audio_path: /kiap/data/speller/Audio/question
  55. number_of_stim: 20
  56. symmetrical: true
  57. color: !munch.Munch
  58. mode: [Validation, Free]
  59. selected_mode: 1
  60. states:
  61. - - gelb
  62. - [E, A, D, C, B, F, ^]
  63. - - gruen
  64. - [N, S, R, O, M, P, Q, ^]
  65. - - rot
  66. - [I, H, L, G, K, J, ^]
  67. - - blau
  68. - [T, U, W, Z, V, Y, X, ^]
  69. - - weiss
  70. - [<, ' ', '?', word, end, ^]
  71. max_length_vocabulary: 5
  72. confirmation_methods: [single, double_yes, best_of_three]
  73. selected_confirmation_method: 0
  74. corpora_path: /kiap/data/speller/Corpora
  75. audio_path: /kiap/data/speller/Audio
  76. general_corpus: cfd_tiger.p
  77. general_user_corpus: general_user_cfd.txt
  78. speller_user_corpus: speller_user.txt
  79. word_prediction: true
  80. validation_string: FELIX.
  81. init_string: ''
  82. n_repeat_unclassified: 1
  83. exploration: !munch.Munch
  84. mode: [Screening]
  85. selected_mode: 0
  86. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  87. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  88. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  89. audio_path: /kiap/data/speller/Audio/exploration
  90. number_of_stim: 5
  91. training_color: !munch.Munch
  92. mode: [Training]
  93. selected_mode: 0
  94. states:
  95. - - gelb
  96. - [E, A, D, C, B, F, ^]
  97. - - gruen
  98. - [N, S, R, O, M, P, Q, ^]
  99. - - rot
  100. - [I, H, L, G, K, J, ^]
  101. - - blau
  102. - [T, U, W, Z, V, Y, X, ^]
  103. - - weiss
  104. - [<, ' ', '?', word, end, ^]
  105. training_string: Gustav
  106. confirmation_yes: 1
  107. confirmation_no: 1
  108. variablesToShowInGUI: !munch.Munch
  109. variableGroups: [timing, color]
  110. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  111. t: 1
  112. feedback: !munch.Munch
  113. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  114. states: !munch.Munch
  115. up: [1.0, 0.7, 1.0]
  116. down: [0.0, 0.0, 0.35]
  117. play_end_feedback: !munch.Munch {success: true, fail: true}
  118. selected_mode: 1
  119. audio_path: /kiap/data/speller/feedback/
  120. symmetrical: true
  121. number_of_stim: 10
  122. mode: [Training, Validation]
  123. daq: !munch.Munch
  124. n_channels_max: 128
  125. exclude_channels: []
  126. car_channels: []
  127. fs: 30000.0
  128. smpl_fct: 30
  129. trigger_len: 50
  130. daq_sleep: 0.1
  131. normalization: !munch.Munch
  132. len: 600.0
  133. do_update: false
  134. update_interval: 10.0
  135. range: [10, 90]
  136. clamp_firing_rates: true
  137. use_all_channels: false
  138. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  139. channels:
  140. - !munch.Munch {id: 20, bottom: 5.0, top: 10.0, invert: true}
  141. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  142. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  143. n_channels: 128
  144. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  145. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2019-07-21,
  146. filename_data: /data/clinical/neural/fr/2019-07-21/data_16_46_22.bin, filename_baseline: /data/clinical/neural/fr/2019-07-21/bl_16_46_21.npy,
  147. filename_log_info: /data/clinical/neural/fr/2019-07-21/info_16_46_22.log, filename_log_debug: /data/clinical/neural/fr/2019-07-21/debug_16_46_21.log,
  148. filename_events: /data/clinical/neural/fr/2019-07-21/events_16_46_22.txt, filename_config: /data/clinical/neural/fr/2019-07-21/config_16_46_21.yaml,
  149. filename_paradigm: /data/clinical/neural/fr/2019-07-21/paradigm_16_46_21.yaml, filename_config_dump: /data/clinical/neural/fr/2019-07-21/config_dump_16_46_21.yaml,
  150. filename_git_patch: /data/clinical/neural/fr/2019-07-21/git_changes_16_46_21.patch,
  151. filename_history: /data/clinical/neural/fr/2019-07-21/history.bin, git_hash: e6a266c}
  152. general: !munch.Munch {debug: 1, clear_trial_history: false}
  153. sim_data: !munch.Munch {rate_bl: 10}
  154. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  155. feedback: !munch.Munch {hold_iterations: 5, beta: 120, feedback_tone: true, target_n_tones: 5,
  156. target_tone_length: 1.0, tone_length: 0.25, alpha: 360}
  157. classifier: !munch.Munch
  158. online: false
  159. thr_prob: 0.8
  160. exclude_data_channels: []
  161. include_channels: [20]
  162. n_neg_train: 100000
  163. n_classes: 2
  164. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  165. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  166. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  167. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  168. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  169. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  170. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  171. n_triggers: 2
  172. trigger_pos: start
  173. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  174. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  175. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  176. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  177. args:
  178. - !!python/name:numpy.ndarray ''
  179. - !!python/tuple [0]
  180. - !!binary |
  181. Yg==
  182. state: !!python/tuple
  183. - 1
  184. - !!python/tuple [8]
  185. - !!python/object/apply:numpy.dtype
  186. args: [i8, 0, 1]
  187. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  188. - false
  189. - !!binary |
  190. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  191. AAAAAAAAAA==
  192. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  193. max_active_ch_nr: []
  194. break_loop: true
  195. deadtime: 40
  196. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  197. thr_window: 40
  198. psth: !munch.Munch
  199. cut: [-40, 100]