config_dump_15_22_28.yaml 7.8 KB

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  1. !munch.Munch
  2. plot: !munch.Munch
  3. fps: 10.0
  4. filter_min_rate: 2
  5. channels: [96, 98]
  6. pca: false
  7. file_handling: !munch.Munch {data_path: /data/clinical/neural/fr/, results: /data/clinical/nf/results/,
  8. paradigm_config_file: paradigm.yaml, save_data: true, mode: ab, datafile_path: /data/clinical/neural/fr/2020-01-22,
  9. filename_data: /data/clinical/neural/fr/2020-01-22/data_15_22_28.bin, filename_baseline: /data/clinical/neural/fr/2020-01-22/bl_15_22_28.npy,
  10. filename_log_info: /data/clinical/neural/fr/2020-01-22/info_15_22_28.log, filename_log_debug: /data/clinical/neural/fr/2020-01-22/debug_15_22_28.log,
  11. filename_events: /data/clinical/neural/fr/2020-01-22/events_15_22_28.txt, filename_config: /data/clinical/neural/fr/2020-01-22/config_15_22_28.yaml,
  12. filename_paradigm: /data/clinical/neural/fr/2020-01-22/paradigm_15_22_28.yaml, filename_config_dump: /data/clinical/neural/fr/2020-01-22/config_dump_15_22_28.yaml,
  13. filename_git_patch: /data/clinical/neural/fr/2020-01-22/git_changes_15_22_28.patch,
  14. filename_history: /data/clinical/neural/fr/2020-01-22/history.bin, git_hash: 52c204f}
  15. system: !munch.Munch {plot: 0}
  16. cerebus: !munch.Munch {instance: 0, buffer_reset: true, buffer_size_cont: 30001, buffer_size_comments: 500}
  17. sim_data: !munch.Munch {rate_bl: 10}
  18. classifier: !munch.Munch
  19. template: !!python/object/apply:numpy.core.multiarray._reconstruct
  20. args:
  21. - !!python/name:numpy.ndarray ''
  22. - !!python/tuple [0]
  23. - !!binary |
  24. Yg==
  25. state: !!python/tuple
  26. - 1
  27. - !!python/tuple [8]
  28. - !!python/object/apply:numpy.dtype
  29. args: [i8, 0, 1]
  30. state: !!python/tuple [3, <, null, null, null, -1, -1, 0]
  31. - false
  32. - !!binary |
  33. CgAAAAAAAAAOAAAAAAAAABIAAAAAAAAAFgAAAAAAAAAaAAAAAAAAAB4AAAAAAAAAIgAAAAAAAAAm
  34. AAAAAAAAAA==
  35. include_channels: [20]
  36. peaks: !munch.Munch {distance: 40, sig: pred, prefilter: false}
  37. psth: !munch.Munch
  38. cut: [-40, 100]
  39. saved_model_conf_name: config/model_conf.yaml
  40. n_triggers: 2
  41. thr_prob: 0.8
  42. exclude_data_channels: []
  43. trigger_pos: start
  44. online: false
  45. max_active_ch_nr: []
  46. n_classes: 2
  47. exclude_channels: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
  48. 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38,
  49. 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58,
  50. 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
  51. 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98,
  52. 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114,
  53. 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127]
  54. thr_window: 40
  55. path_model1: /data/clinical/neural/fr/2019-06-26/model1_104948.pkl
  56. break_loop: true
  57. n_neg_train: 100000
  58. deadtime: 40
  59. model_training: !munch.Munch {save_model: false, model: scikit, solver: lsqr, cross_validation: true,
  60. n_splits: 5, test_size: 0.2, reg_fact: 0.3, fsel: false, triggers_plot: 3}
  61. path_model2: /data/clinical/neural/fr/2019-06-26/model2_104948.pkl
  62. n_features: 1024
  63. paradigms: !munch.Munch
  64. feedback: !munch.Munch
  65. play_end_feedback: !munch.Munch {success: true, fail: true}
  66. audio_path: /kiap/data/speller/feedback/
  67. mode: [Training, Validation]
  68. states: !munch.Munch
  69. down: [0.0, 0.0, 0.3]
  70. up: [1.0, 0.7, 1.0]
  71. sounds: !munch.Munch {success: /kiap/data/speller/feedback/kerching.wav, fail: /kiap/data/speller/feedback/blarg.wav}
  72. number_of_stim: 10
  73. selected_mode: 0
  74. symmetrical: true
  75. variablesToShowInGUI: !munch.Munch
  76. variableGroups: [timing, color]
  77. variableNames: [t_baseline, t_response, bci_loop_interval, selected_mode, max_length_vocabulary]
  78. t: 1
  79. color: !munch.Munch
  80. word_prediction: false
  81. n_repeat_unclassified: 1
  82. general_user_corpus: general_user_cfd.txt
  83. validation_string: ''
  84. max_length_vocabulary: 5
  85. audio_path: /kiap/data/speller/Audio
  86. states:
  87. - - gelb
  88. - [E, A, D, C, B, F, ^]
  89. - - gruen
  90. - [N, S, R, O, M, P, Q, ^]
  91. - - rot
  92. - [I, H, L, G, K, J, ^]
  93. - - blau
  94. - [T, U, W, Z, V, Y, X, ^]
  95. - - weiss
  96. - [<, ' ', end, ^]
  97. mode: [Validation, Free]
  98. general_corpus: cfd_tiger.p
  99. confirmation_methods: [single, double_yes, best_of_three]
  100. selected_confirmation_method: 0
  101. init_string: ''
  102. corpora_path: /kiap/data/speller/Corpora
  103. selected_mode: 1
  104. speller_user_corpus: speller_user.txt
  105. exploration: !munch.Munch
  106. mode: [Screening]
  107. selected_mode: 0
  108. states: [SchliesseHand, BeugeRechtenMittelfinger, BeugeRechtenZeigefinger, BeugeRechtenDaumen,
  109. OeffneHand, StreckeRechtenMittelfinger, StreckeRechtenZeigefinger, StreckeRechtenDaumen]
  110. selected_states: [0, 1, 2, 3, 4, 5, 6, 7]
  111. audio_path: /kiap/data/speller/Audio/exploration
  112. number_of_stim: 5
  113. training_color: !munch.Munch
  114. mode: [Training]
  115. selected_mode: 0
  116. states:
  117. - - gelb
  118. - [E, A, D, C, B, F, ^]
  119. - - gruen
  120. - [N, S, R, O, M, P, Q, ^]
  121. - - rot
  122. - [I, H, L, G, K, J, ^]
  123. - - blau
  124. - [T, U, W, Z, V, Y, X, ^]
  125. - - weiss
  126. - [<, ' ', '?', word, end, ^]
  127. training_string: Gustav
  128. confirmation_yes: 1
  129. confirmation_no: 1
  130. question: !munch.Munch
  131. mode: [Training, Validation, Free]
  132. selected_mode: 2
  133. audio_path: /kiap/data/speller/Audio/question
  134. number_of_stim: 10
  135. symmetrical: true
  136. recording: !munch.Munch
  137. timing: !munch.Munch {t_baseline_all: 1.0, recording_loop_interval_data: 0.02, t_response: 5.0,
  138. t_after_stimulus: 0.2, recording_loop_interval: 0.05, t_baseline_rand: 1.0, t_baseline_1: 5.0,
  139. decoder_refresh_interval: 0.01, bci_loop_interval: 0.05}
  140. feedback: !munch.Munch {feedback_tone: true, tone_length: 0.25, hold_iterations: 2,
  141. beta: 120, alpha: 360, target_tone_length: 1.0, target_n_tones: 5}
  142. general: !munch.Munch {debug: 1, clear_trial_history: false}
  143. buffer: !munch.Munch
  144. length: 600
  145. shape: [600, 128]
  146. supplemental_config: [config/model_conf.yaml, config/channels.yaml, config/colorspeller.yaml]
  147. session: !munch.Munch
  148. flags: !munch.Munch {bl: true, bl_rand: true, stimulus: true, decode: false}
  149. lfp: !munch.Munch
  150. fs: 1000
  151. sampling_ratio: 30
  152. filter_fc_lb: [10, 0]
  153. filter_fc_mb: [12, 40]
  154. filter_fc_hb: [60, 250]
  155. filter_order_lb: 2
  156. filter_order_mb: 6
  157. filter_order_hb: 10
  158. artifact_thr: 400
  159. array1: [32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49,
  160. 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63]
  161. array21: [0, 1]
  162. array22: []
  163. array1_exclude: []
  164. array2_exclude: []
  165. i_start: 0
  166. i_stop: -1
  167. psth_win: [-1000, 5000]
  168. exclude: false
  169. normalize: false
  170. zscore: false
  171. car: true
  172. sub_band: 1
  173. motor_mapping: [Zunge, Schliesse_Hand, Oeffne_Hand, Bewege_Augen, Bewege_Kopf]
  174. spectra: !munch.Munch {spgr_len: 500}
  175. plot: !munch.Munch
  176. ch_ids: [0]
  177. general: true
  178. filters: false
  179. array2: [0, 1]
  180. daq: !munch.Munch
  181. car_channels: []
  182. data_source: spike_rates
  183. spike_band_power: !munch.Munch
  184. average_n_bins: 10
  185. sample_group: 6
  186. filter: !munch.Munch
  187. b: [0.956543225556877, -1.91308645111375, 0.956543225556877]
  188. a: [1, -1.91119706742607, 0.914975834801434]
  189. integrated_samples: 1500
  190. loop_interval: 50
  191. exclude_channels: []
  192. daq_sleep: 0.1
  193. fs: 30000.0
  194. n_channels_max: 128
  195. spike_rates: !munch.Munch {n_units: 1, bin_width: 0.05, loop_interval: 50, method: boxcar,
  196. decay_factor: 0.9, max_bins: 20, bl_offset: 30.0, correct_bl: false, correct_bl_model: false}
  197. trigger_len: 50
  198. smpl_fct: 30
  199. normalization: !munch.Munch
  200. all_channels: !munch.Munch {bottom: 1.15625, top: 1.59375, invert: false}
  201. channels:
  202. - !munch.Munch {id: 17, bottom: 4.0, top: 10.0, invert: false}
  203. use_all_channels: false
  204. update_interval: 10.0
  205. do_update: false
  206. range: [10, 90]
  207. clamp_firing_rates: true
  208. len: 600.0
  209. n_channels: 128
  210. speller: !munch.Munch {speller_matrix: true, type: color, audio: true, audio_result_fb: true,
  211. pyttsx_rate: 100}