[DATALAD] Recorded changes

.gitmodules

@@ -1,6 +0,0 @@
-[submodule "rawdata/code/dandi-cli"]
-	path = rawdata/code/dandi-cli
-	url = https://github.com/dandi/dandi-cli.git
-[submodule "rawdata/code/python-neo"]
-	path = rawdata/code/python-neo
-	url = https://github.com/NeuralEnsemble/python-neo.git

nwbdata/outfile.nwb

@@ -0,0 +1 @@
+../.git/annex/objects/Gq/g7/MD5E-s18607523218--3982027a2d4c6c9aa1f9968a83220490.nwb/MD5E-s18607523218--3982027a2d4c6c9aa1f9968a83220490.nwb

rawdata/code/bids_output/participants.json

@@ -1,15 +0,0 @@
-{
-    "subject_id": {
-        "Description": "Unique identifier of the subject"
-    },
-    "species": {
-        "Description": "The binomial species name from the NCBI Taxonomy"
-    },
-    "age": {
-        "Description": "Age of the participant at time of recording",
-        "Units": "days"
-    },
-    "sex": {
-        "Description": "Sex of participant"
-    }
-}

rawdata/code/bids_output/participants.tsv

@@ -1,2 +0,0 @@
-subject_id	species	age	sex
-sub-M388	Mus musculus	P90D	F

rawdata/code/bids_output/sub-M388/ses-20231120114021/ephys/channels.tsv

@@ -1,394 +0,0 @@
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rawdata/code/bids_output/sub-M388/ses-20231120114021/ephys/contacts.tsv

@@ -1,394 +0,0 @@
-contact_id	probe_id
-0	Neuropixel-Imec
-1	Neuropixel-Imec
-2	Neuropixel-Imec
-3	Neuropixel-Imec
-4	Neuropixel-Imec
-5	Neuropixel-Imec
-6	Neuropixel-Imec
-7	Neuropixel-Imec
-8	Neuropixel-Imec
-9	Neuropixel-Imec
-10	Neuropixel-Imec
-11	Neuropixel-Imec
-12	Neuropixel-Imec
-13	Neuropixel-Imec
-14	Neuropixel-Imec
-15	Neuropixel-Imec
-16	Neuropixel-Imec
-17	Neuropixel-Imec
-18	Neuropixel-Imec
-19	Neuropixel-Imec
-20	Neuropixel-Imec
-21	Neuropixel-Imec
-22	Neuropixel-Imec
-23	Neuropixel-Imec
-24	Neuropixel-Imec
-25	Neuropixel-Imec
-26	Neuropixel-Imec
-27	Neuropixel-Imec
-28	Neuropixel-Imec
-29	Neuropixel-Imec
-30	Neuropixel-Imec
-31	Neuropixel-Imec
-32	Neuropixel-Imec
-33	Neuropixel-Imec
-34	Neuropixel-Imec
-35	Neuropixel-Imec
-36	Neuropixel-Imec
-37	Neuropixel-Imec
-38	Neuropixel-Imec
-39	Neuropixel-Imec
-40	Neuropixel-Imec
-41	Neuropixel-Imec
-42	Neuropixel-Imec
-43	Neuropixel-Imec
-44	Neuropixel-Imec
-45	Neuropixel-Imec
-46	Neuropixel-Imec
-47	Neuropixel-Imec
-48	Neuropixel-Imec
-49	Neuropixel-Imec
-50	Neuropixel-Imec
-51	Neuropixel-Imec
-52	Neuropixel-Imec
-53	Neuropixel-Imec
-54	Neuropixel-Imec
-55	Neuropixel-Imec
-56	Neuropixel-Imec
-57	Neuropixel-Imec
-58	Neuropixel-Imec
-59	Neuropixel-Imec
-60	Neuropixel-Imec
-61	Neuropixel-Imec
-62	Neuropixel-Imec
-63	Neuropixel-Imec
-64	Neuropixel-Imec
-65	Neuropixel-Imec
-66	Neuropixel-Imec
-67	Neuropixel-Imec
-68	Neuropixel-Imec
-69	Neuropixel-Imec
-70	Neuropixel-Imec
-71	Neuropixel-Imec
-72	Neuropixel-Imec
-73	Neuropixel-Imec
-74	Neuropixel-Imec
-75	Neuropixel-Imec
-76	Neuropixel-Imec
-77	Neuropixel-Imec
-78	Neuropixel-Imec
-79	Neuropixel-Imec
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-82	Neuropixel-Imec
-83	Neuropixel-Imec
-84	Neuropixel-Imec
-85	Neuropixel-Imec
-86	Neuropixel-Imec
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-89	Neuropixel-Imec
-90	Neuropixel-Imec
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-92	Neuropixel-Imec
-93	Neuropixel-Imec
-94	Neuropixel-Imec
-95	Neuropixel-Imec
-96	Neuropixel-Imec
-97	Neuropixel-Imec
-98	Neuropixel-Imec
-99	Neuropixel-Imec
-100	Neuropixel-Imec
-101	Neuropixel-Imec
-102	Neuropixel-Imec
-103	Neuropixel-Imec
-104	Neuropixel-Imec
-105	Neuropixel-Imec
-106	Neuropixel-Imec
-107	Neuropixel-Imec
-108	Neuropixel-Imec
-109	Neuropixel-Imec
-110	Neuropixel-Imec
-111	Neuropixel-Imec
-112	Neuropixel-Imec
-113	Neuropixel-Imec
-114	Neuropixel-Imec
-115	Neuropixel-Imec
-116	Neuropixel-Imec
-117	Neuropixel-Imec
-118	Neuropixel-Imec
-119	Neuropixel-Imec
-120	Neuropixel-Imec
-121	Neuropixel-Imec
-122	Neuropixel-Imec
-123	Neuropixel-Imec
-124	Neuropixel-Imec
-125	Neuropixel-Imec
-126	Neuropixel-Imec
-127	Neuropixel-Imec
-128	Neuropixel-Imec
-129	Neuropixel-Imec
-130	Neuropixel-Imec
-131	Neuropixel-Imec
-132	Neuropixel-Imec
-133	Neuropixel-Imec
-134	Neuropixel-Imec
-135	Neuropixel-Imec
-136	Neuropixel-Imec
-137	Neuropixel-Imec
-138	Neuropixel-Imec
-139	Neuropixel-Imec
-140	Neuropixel-Imec
-141	Neuropixel-Imec
-142	Neuropixel-Imec
-143	Neuropixel-Imec
-144	Neuropixel-Imec
-145	Neuropixel-Imec
-146	Neuropixel-Imec
-147	Neuropixel-Imec
-148	Neuropixel-Imec
-149	Neuropixel-Imec
-150	Neuropixel-Imec
-151	Neuropixel-Imec
-152	Neuropixel-Imec
-153	Neuropixel-Imec
-154	Neuropixel-Imec
-155	Neuropixel-Imec
-156	Neuropixel-Imec
-157	Neuropixel-Imec
-158	Neuropixel-Imec
-159	Neuropixel-Imec
-160	Neuropixel-Imec
-161	Neuropixel-Imec
-162	Neuropixel-Imec
-163	Neuropixel-Imec
-164	Neuropixel-Imec
-165	Neuropixel-Imec
-166	Neuropixel-Imec
-167	Neuropixel-Imec
-168	Neuropixel-Imec
-169	Neuropixel-Imec
-170	Neuropixel-Imec
-171	Neuropixel-Imec
-172	Neuropixel-Imec
-173	Neuropixel-Imec
-174	Neuropixel-Imec
-175	Neuropixel-Imec
-176	Neuropixel-Imec
-177	Neuropixel-Imec
-178	Neuropixel-Imec
-179	Neuropixel-Imec
-180	Neuropixel-Imec
-181	Neuropixel-Imec
-182	Neuropixel-Imec
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-184	Neuropixel-Imec
-185	Neuropixel-Imec
-186	Neuropixel-Imec
-187	Neuropixel-Imec
-188	Neuropixel-Imec
-189	Neuropixel-Imec
-190	Neuropixel-Imec
-191	Neuropixel-Imec
-192	Neuropixel-Imec
-193	Neuropixel-Imec
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-196	Neuropixel-Imec
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-198	Neuropixel-Imec
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-200	Neuropixel-Imec
-201	Neuropixel-Imec
-202	Neuropixel-Imec
-203	Neuropixel-Imec
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-206	Neuropixel-Imec
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-210	Neuropixel-Imec
-211	Neuropixel-Imec
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-214	Neuropixel-Imec
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-216	Neuropixel-Imec
-217	Neuropixel-Imec
-218	Neuropixel-Imec
-219	Neuropixel-Imec
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-221	Neuropixel-Imec
-222	Neuropixel-Imec
-223	Neuropixel-Imec
-224	Neuropixel-Imec
-225	Neuropixel-Imec
-226	Neuropixel-Imec
-227	Neuropixel-Imec
-228	Neuropixel-Imec
-229	Neuropixel-Imec
-230	Neuropixel-Imec
-231	Neuropixel-Imec
-232	Neuropixel-Imec
-233	Neuropixel-Imec
-234	Neuropixel-Imec
-235	Neuropixel-Imec
-236	Neuropixel-Imec
-237	Neuropixel-Imec
-238	Neuropixel-Imec
-239	Neuropixel-Imec
-240	Neuropixel-Imec
-241	Neuropixel-Imec
-242	Neuropixel-Imec
-243	Neuropixel-Imec
-244	Neuropixel-Imec
-245	Neuropixel-Imec
-246	Neuropixel-Imec
-247	Neuropixel-Imec
-248	Neuropixel-Imec
-249	Neuropixel-Imec
-250	Neuropixel-Imec
-251	Neuropixel-Imec
-252	Neuropixel-Imec
-253	Neuropixel-Imec
-254	Neuropixel-Imec
-255	Neuropixel-Imec
-256	Neuropixel-Imec
-257	Neuropixel-Imec
-258	Neuropixel-Imec
-259	Neuropixel-Imec
-260	Neuropixel-Imec
-261	Neuropixel-Imec
-262	Neuropixel-Imec
-263	Neuropixel-Imec
-264	Neuropixel-Imec
-265	Neuropixel-Imec
-266	Neuropixel-Imec
-267	Neuropixel-Imec
-268	Neuropixel-Imec
-269	Neuropixel-Imec
-270	Neuropixel-Imec
-271	Neuropixel-Imec
-272	Neuropixel-Imec
-273	Neuropixel-Imec
-274	Neuropixel-Imec
-275	Neuropixel-Imec
-276	Neuropixel-Imec
-277	Neuropixel-Imec
-278	Neuropixel-Imec
-279	Neuropixel-Imec
-280	Neuropixel-Imec
-281	Neuropixel-Imec
-282	Neuropixel-Imec
-283	Neuropixel-Imec
-284	Neuropixel-Imec
-285	Neuropixel-Imec
-286	Neuropixel-Imec
-287	Neuropixel-Imec
-288	Neuropixel-Imec
-289	Neuropixel-Imec
-290	Neuropixel-Imec
-291	Neuropixel-Imec
-292	Neuropixel-Imec
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-299	Neuropixel-Imec
-300	Neuropixel-Imec
-301	Neuropixel-Imec
-302	Neuropixel-Imec
-303	Neuropixel-Imec
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-306	Neuropixel-Imec
-307	Neuropixel-Imec
-308	Neuropixel-Imec
-309	Neuropixel-Imec
-310	Neuropixel-Imec
-311	Neuropixel-Imec
-312	Neuropixel-Imec
-313	Neuropixel-Imec
-314	Neuropixel-Imec
-315	Neuropixel-Imec
-316	Neuropixel-Imec
-317	Neuropixel-Imec
-318	Neuropixel-Imec
-319	Neuropixel-Imec
-320	Neuropixel-Imec
-321	Neuropixel-Imec
-322	Neuropixel-Imec
-323	Neuropixel-Imec
-324	Neuropixel-Imec
-325	Neuropixel-Imec
-326	Neuropixel-Imec
-327	Neuropixel-Imec
-328	Neuropixel-Imec
-329	Neuropixel-Imec
-330	Neuropixel-Imec
-331	Neuropixel-Imec
-332	Neuropixel-Imec
-333	Neuropixel-Imec
-334	Neuropixel-Imec
-335	Neuropixel-Imec
-336	Neuropixel-Imec
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-338	Neuropixel-Imec
-339	Neuropixel-Imec
-340	Neuropixel-Imec
-341	Neuropixel-Imec
-342	Neuropixel-Imec
-343	Neuropixel-Imec
-344	Neuropixel-Imec
-345	Neuropixel-Imec
-346	Neuropixel-Imec
-347	Neuropixel-Imec
-348	Neuropixel-Imec
-349	Neuropixel-Imec
-350	Neuropixel-Imec
-351	Neuropixel-Imec
-352	Neuropixel-Imec
-353	Neuropixel-Imec
-354	Neuropixel-Imec
-355	Neuropixel-Imec
-356	Neuropixel-Imec
-357	Neuropixel-Imec
-358	Neuropixel-Imec
-359	Neuropixel-Imec
-360	Neuropixel-Imec
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-365	Neuropixel-Imec
-366	Neuropixel-Imec
-367	Neuropixel-Imec
-368	Neuropixel-Imec
-369	Neuropixel-Imec
-370	Neuropixel-Imec
-371	Neuropixel-Imec
-372	Neuropixel-Imec
-373	Neuropixel-Imec
-374	Neuropixel-Imec
-375	Neuropixel-Imec
-376	Neuropixel-Imec
-377	Neuropixel-Imec
-378	Neuropixel-Imec
-379	Neuropixel-Imec
-380	Neuropixel-Imec
-381	Neuropixel-Imec
-382	Neuropixel-Imec
-383	Neuropixel-Imec
-384	Neuropixel-Imec
-385	Neuropixel-Imec
-386	Neuropixel-Imec
-387	Neuropixel-Imec
-388	Neuropixel-Imec
-389	Neuropixel-Imec
-390	Neuropixel-Imec
-391	Neuropixel-Imec
-392	Neuropixel-Imec

rawdata/code/bids_output/sub-M388/ses-20231120114021/ephys/probes.tsv

@@ -1,2 +0,0 @@
-probe_id	type	description	manufacturer
-Neuropixel-Imec	unknown	"{""probe_type"": ""0"", ""probe_type_description"": ""NP1.0"", ""flex_part_number"": ""NP2_FLEX_0"", ""connected_base_station_part_number"": ""NP2_QBSC_00""}"	Imec

rawdata/code/bids_output/sub-M388/ses-20231120114021/ephys/sub-M388_ses-20231120114021.nwb

@@ -1 +0,0 @@
-../../../../../../.git/annex/objects/pF/1M/MD5E-s18608928083--27d8f877fbad3f65490eb2323fbc6603.nwb/MD5E-s18608928083--27d8f877fbad3f65490eb2323fbc6603.nwb

rawdata/code/bids_output/sub-M388/sessions.json

@@ -1 +0,0 @@
-{}

rawdata/code/bids_output/sub-M388/sessions.tsv

@@ -1,2 +0,0 @@
-session_id	comments
-ses-20231120114021	Auto-generated by neuroconv

rawdata/code/dandi-cli

@@ -1 +0,0 @@
-Subproject commit 96c395393eb4c1b1b04404445969e80e5e57bc2d

rawdata/code/python-neo

@@ -1 +0,0 @@
-Subproject commit 4ef280130be875263878d5e55dbf7ee40f950c9b

rawdata/dandiset.yaml

@@ -20,7 +20,7 @@ contributor:
   - dcite:ContactPerson
   schemaKey: Person
 dateCreated: '2024-01-25T15:57:58.990029+00:00'
-datePublished: '2024-01-25T15:58:34.008145+00:00'
+datePublished: '2024-01-25T19:14:34.109394+00:00'
 description: Neuropixels SpikeGLX data for olfaction.
 doi: 10.80507/dandi.123456/0.123456.1234
 id: DANDI:000876/draft
@@ -31,13 +31,13 @@ manifestLocation:
 - https://api.dandiarchive.org/api/dandisets/000876/versions/draft/assets/
 name: MVMNDA
 publishedBy:
-  endDate: '2024-01-25T15:58:34.008145+00:00'
-  id: urn:uuid:1d0ab10e-bbc8-4059-9d81-4cce2184f32d
+  endDate: '2024-01-25T19:14:34.109394+00:00'
+  id: urn:uuid:ea6c99fd-4420-4cf5-9549-90c09e4fd695
   name: DANDI publish
   schemaKey: PublishActivity
-  startDate: '2024-01-25T15:58:34.008145+00:00'
+  startDate: '2024-01-25T19:14:34.109394+00:00'
   wasAssociatedWith:
-  - id: urn:uuid:14761d69-7aca-4a41-83f8-be522a85fa00
+  - id: urn:uuid:91fe7aa0-c0df-440e-88f5-c715e161da66
     identifier: RRID:SCR_017571
     name: DANDI API
     schemaKey: Software

rawdata/environment_for_issue.txt

@@ -1,154 +0,0 @@
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-------------------------- ------------
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-dandi                     0.57.0
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-h5py                      3.10.0
-hdmf                      3.11.0
-humanize                  4.8.0
-idna                      3.4
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-isodate                   0.6.1
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-jsonschema-specifications 2023.7.1
-jupyterlab-widgets        3.0.9
-kachery-cloud             0.4.6
-keyring                   24.2.0
-keyrings.alt              5.0.0
-kiwisolver                1.4.5
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-locket                    1.0.0
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-nwbinspector              0.4.31
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-pip                       23.0.1
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-pycryptodomex             3.19.0
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-Pygments                  2.17.2
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-pyparsing                 3.1.1
-python-dateutil           2.8.2
-pytz                      2023.3.post1
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rawdata/sub-M388/sub-M388_ecephys.nwb

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