Anesthesia_CA1/Anesthesia/calcium_imaging_transition_state/concatenated/8238/20201102_GCaMP6f_8238_isoflurane/suite2p/run.log

 >>>>> started run at 19/11/2020 15:23:27{'data_path': ['H:/Transition_state_new/8238/20201102_GCaMP6f_8238_iso'], 'subfolders': [], 'save_path0': 'H:/Transition_state_new/8238/20201102_GCaMP6f_8238_iso', 'fast_disk': 'H:/Transition_state_new/8238/20201102_GCaMP6f_8238_iso', 'input_format': 'tif'}
tif
** Found 9 tifs - converting to binary **
2000 frames of binary, time 2.10 sec.
4000 frames of binary, time 3.46 sec.
6000 frames of binary, time 4.86 sec.
time 147.47 sec. Wrote 128366 frames per binary for 1 planes
>>>>>>>>>>>>>>>>>>>>> PLANE 0 <<<<<<<<<<<<<<<<<<<<<<
NOTE: not registered / registration forced with ops['do_registration']>1
      (no previous offsets to delete)
----------- REGISTRATION
registering 128366 frames
Reference frame, 145.67 sec.
Registered 2000/128366 in 66.35s
Registered 4000/128366 in 132.05s
Registered 6000/128366 in 197.88s
Registered 8000/128366 in 263.64s
Registered 10000/128366 in 329.46s
Registered 12000/128366 in 395.96s
Registered 14000/128366 in 461.64s
Registered 16000/128366 in 527.68s
Registered 18000/128366 in 593.35s
Registered 20000/128366 in 659.13s
Registered 22000/128366 in 724.89s
Registered 24000/128366 in 790.76s
Registered 26000/128366 in 856.63s
Registered 28000/128366 in 922.54s
Registered 30000/128366 in 988.36s
Registered 32000/128366 in 1054.18s
Registered 34000/128366 in 1120.09s
Registered 36000/128366 in 1185.94s
Registered 38000/128366 in 1252.91s
Registered 40000/128366 in 1320.62s
Registered 42000/128366 in 1388.33s
Registered 44000/128366 in 1454.58s
Registered 46000/128366 in 1520.36s
Registered 48000/128366 in 1586.39s
Registered 50000/128366 in 1652.19s
Registered 52000/128366 in 1718.05s
Registered 54000/128366 in 1783.96s
Registered 56000/128366 in 1849.67s
Registered 58000/128366 in 1915.12s
Registered 60000/128366 in 1981.08s
Registered 62000/128366 in 2047.24s
Registered 64000/128366 in 2113.96s
Registered 66000/128366 in 2181.22s
Registered 68000/128366 in 2247.10s
Registered 70000/128366 in 2312.84s
Registered 72000/128366 in 2378.50s
Registered 74000/128366 in 2444.12s
Registered 76000/128366 in 2509.94s
Registered 78000/128366 in 2575.76s
Registered 80000/128366 in 2641.77s
Registered 82000/128366 in 2707.71s
Registered 84000/128366 in 2773.77s
Registered 86000/128366 in 2839.70s
Registered 88000/128366 in 2905.79s
Registered 90000/128366 in 2971.83s
Registered 92000/128366 in 3037.70s
Registered 94000/128366 in 3103.64s
Registered 96000/128366 in 3169.58s
Registered 98000/128366 in 3235.37s
Registered 100000/128366 in 3301.47s
Registered 102000/128366 in 3367.51s
Registered 104000/128366 in 3433.64s
Registered 106000/128366 in 3499.69s
Registered 108000/128366 in 3565.72s
Registered 110000/128366 in 3631.68s
Registered 112000/128366 in 3697.44s
Registered 114000/128366 in 3763.32s
Registered 116000/128366 in 3829.13s
Registered 118000/128366 in 3895.19s
Registered 120000/128366 in 3960.90s
Registered 122000/128366 in 4026.80s
Registered 124000/128366 in 4092.87s
Registered 126000/128366 in 4158.80s
Registered 128000/128366 in 4224.71s
----------- Total 4385.28 sec
Registration metrics, 45.48 sec.
NOTE: applying default C:\Users\axelf\.suite2p\classifiers\classifier_user.npy
----------- ROI DETECTION
Binning movie in chunks of length 25
Binned movie [5115,484,484], 145.20 sec.
NOTE: estimated spatial scale ~12 pixels, time epochs 4.26, threshold 42.62 
0 ROIs, score=1065.06
1000 ROIs, score=95.59
2000 ROIs, score=59.49
3000 ROIs, score=43.38
Found 3067 ROIs, 185.64 sec
After removing overlaps, 2200 ROIs remain
Masks made in 23.57 sec.
----------- Total 355.70 sec.
----------- EXTRACTION
Extracted fluorescence from 2200 ROIs in 128366 frames, 1434.26 sec.
added enhanced mean image
----------- Total 1447.58 sec.
----------- CLASSIFICATION
----------- Total 0.04 sec.
WARNING: skipping spike detection (ops['spikedetect']=False)
Plane 0 processed in 6236.46 sec (can open in GUI).
total = 6384.89 sec.
TOTAL RUNTIME 6384.89 sec