Anesthesia_CA1/Sleep/calcium_imaging/8235/6/suite2p/run.log

 >>>>> started run at 30/11/2020 13:27:11{'data_path': ['H:/Sleep/20201029_GCaMP6f_8235_awake/6'], 'subfolders': [], 'save_path0': 'H:/Sleep/20201029_GCaMP6f_8235_awake/6', 'fast_disk': 'H:/Sleep/20201029_GCaMP6f_8235_awake/6', 'input_format': 'tif'}
tif
** Found 1 tifs - converting to binary **
2000 frames of binary, time 4.91 sec.
4000 frames of binary, time 6.71 sec.
6000 frames of binary, time 8.50 sec.
8000 frames of binary, time 10.04 sec.
10000 frames of binary, time 11.59 sec.
time 12.75 sec. Wrote 10852 frames per binary for 1 planes
>>>>>>>>>>>>>>>>>>>>> PLANE 0 <<<<<<<<<<<<<<<<<<<<<<
NOTE: not registered / registration forced with ops['do_registration']>1
      (no previous offsets to delete)
----------- REGISTRATION
registering 10852 frames
Reference frame, 20.52 sec.
Registered 2000/10852 in 92.22s
Registered 4000/10852 in 228.57s
Registered 6000/10852 in 385.99s
Registered 8000/10852 in 518.02s
Registered 10000/10852 in 636.19s
----------- Total 700.05 sec
Registration metrics, 90.05 sec.
NOTE: applying default C:\Users\axelf\.suite2p\classifiers\classifier_user.npy
----------- ROI DETECTION
Binning movie in chunks of length 21
Binned movie [483,502,500], 13.78 sec.
NOTE: estimated spatial scale ~12 pixels, time epochs 1.00, threshold 10.00 
0 ROIs, score=504.64
1000 ROIs, score=30.01
2000 ROIs, score=13.59
Found 2916 ROIs, 31.32 sec
After removing overlaps, 2396 ROIs remain
Masks made in 36.98 sec.
----------- Total 83.44 sec.
----------- EXTRACTION
Extracted fluorescence from 2396 ROIs in 10852 frames, 193.79 sec.
added enhanced mean image
----------- Total 202.72 sec.
----------- CLASSIFICATION
----------- Total 0.03 sec.
WARNING: skipping spike detection (ops['spikedetect']=False)
Plane 0 processed in 1076.95 sec (can open in GUI).
total = 1090.39 sec.
TOTAL RUNTIME 1090.39 sec