RSchenk/MriSequencingPipeline @ 605090d9ef0355a0f7ff9e9637d668ebdb5503de - G-Node GIN

Scheduled service maintenance on November 22

On Friday, November 22, 2024, between 06:00 CET and 18:00 CET, GIN services will undergo planned maintenance. Extended service interruptions should be expected. We will try to keep downtimes to a minimum, but recommend that users avoid critical tasks, large data uploads, or DOI requests during this time.

We apologize for any inconvenience.

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FROM python:3.11.6-alpine3.18
RUN apk -U upgrade && apk add --no-cache openjdk17-jre unzip
RUN wget 'https://github.com/usadellab/Trimmomatic/files/5854859/Trimmomatic-0.39.zip' && unzip 'Trimmomatic-0.39.zip' && rm 'Trimmomatic-0.39.zip'
COPY run_trimming.py /run_trimming.py
ENTRYPOINT ["python", "run_trimming.py"]