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Andrey Vinogradov 3 years ago
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      README.md

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README.md

@@ -49,7 +49,7 @@ Data directory embeds the following sub-directories
 * hPSC_MEA3_Pharmacology, Rat_MEA2_Pharmacology <- pharmacological experiments
 * PCA <- data sets for MEA plates, used in PCA analysis
 
-PCA folder contains 7 sub-folders with pre-selected MEA sets used in PCA analysis (3 timepoints for each set): *hPSC_MEA1_PCA*, *hPSC_MEA2_PCA*, *hPSC_MEA4_PCA*, *hPSC_MEA5_PCA*, *Rat_MEA1_PCA*, *Rat_MEA3_PCA*, *Rat_MEA4_PCA*. PCA folder also includes *PCA_table.xlsx* file which contains extracted *meaRtools* output features of the sets for running MATLAB PCA analysis code (may be found in the Codes directory : \Codes\PCA_code\PCA.m).
+PCA folder contains 7 sub-folders with pre-selected MEA sets used in PCA analysis (3 timepoints for each set): *hPSC_MEA1_PCA*, *hPSC_MEA2_PCA*, *hPSC_MEA4_PCA*, *hPSC_MEA5_PCA*, *Rat_MEA1_PCA*, *Rat_MEA3_PCA*, *Rat_MEA4_PCA*. PCA folder also includes *PCA_table.xlsx* file which contains extracted *meaRtools* output features of the sets for running MATLAB PCA analysis code (may be found in the Codes directory : /Codes/PCA_code/PCA.m).
 
 Each folder contains raw MEA recordings in HDF5 format (used, for example as an input for MATLAB spike detection). Each .h5 file accomodate two groups: Data and DataInfo. Data group embeds subgroups for each well of MEA plate. Each of these subgroups contains a number of datasets for each electrode in the well. For example, to access the recording of electode 11 of well B3 of ... .h5 in MATLAB, the following command should be executed: