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- import unittest
- import datetime
- from odml import Property, Section, Document, DType
- from odml.property import BaseProperty
- from odml.section import BaseSection
- class TestProperty(unittest.TestCase):
- def test_simple_attributes(self):
- p_name = "propertyName"
- p_origin = "from over there"
- p_unit = "pears"
- p_uncertainty = "12"
- p_ref = "4 8 15 16 23"
- p_def = "an odml test property"
- p_dep = "yes"
- p_dep_val = "42"
- prop = Property(name=p_name, value_origin=p_origin, unit=p_unit,
- uncertainty=p_uncertainty, reference=p_ref, definition=p_def,
- dependency=p_dep, dependency_value=p_dep_val)
- self.assertEqual(prop.name, p_name)
- self.assertEqual(prop.value_origin, p_origin)
- self.assertEqual(prop.unit, p_unit)
- self.assertEqual(prop.uncertainty, p_uncertainty)
- self.assertEqual(prop.reference, p_ref)
- self.assertEqual(prop.definition, p_def)
- self.assertEqual(prop.dependency, p_dep)
- self.assertEqual(prop.dependency_value, p_dep_val)
- # Test setting attributes
- prop.name = "%s_edit" % p_name
- self.assertEqual(prop.name, "%s_edit" % p_name)
- prop.value_origin = "%s_edit" % p_origin
- self.assertEqual(prop.value_origin, "%s_edit" % p_origin)
- prop.unit = "%s_edit" % p_unit
- self.assertEqual(prop.unit, "%s_edit" % p_unit)
- prop.uncertainty = 13
- self.assertEqual(prop.uncertainty, 13.0)
- prop.reference = "%s_edit" % p_ref
- self.assertEqual(prop.reference, "%s_edit" % p_ref)
- prop.definition = "%s_edit" % p_def
- self.assertEqual(prop.definition, "%s_edit" % p_def)
- prop.dependency = "%s_edit" % p_dep
- self.assertEqual(prop.dependency, "%s_edit" % p_dep)
- prop.dependency_value = "%s_edit" % p_dep_val
- self.assertEqual(prop.dependency_value, "%s_edit" % p_dep_val)
- # Test setting attributes to None when '' is passed.
- prop.value_origin = ""
- self.assertIsNone(prop.value_origin)
- prop.unit = ""
- self.assertIsNone(prop.unit)
- prop.uncertainty = ""
- self.assertIsNone(prop.uncertainty)
- prop.reference = ""
- self.assertIsNone(prop.reference)
- prop.definition = ""
- self.assertIsNone(prop.definition)
- prop.dependency = ""
- self.assertIsNone(prop.dependency)
- prop.dependency_value = ""
- self.assertIsNone(prop.dependency_value)
- def test_value(self):
- prop = Property("property", 100)
- self.assertEqual(prop.values[0], 100)
- self.assertIsInstance(prop.values, list)
- prop.values = None
- self.assertEqual(len(prop), 0)
- prop.values = [1, 2, 3]
- prop.values = ""
- self.assertEqual(len(prop), 0)
- prop.values = [1, 2, 3]
- prop.values = []
- self.assertEqual(len(prop), 0)
- prop.values = [1, 2, 3]
- prop.values = ()
- self.assertEqual(len(prop), 0)
- prop.values.append(5)
- self.assertEqual(len(prop.values), 0)
- prop2 = Property("test", {"name": "Marie"})
- self.assertEqual(len(prop2), 1)
- # Test tuple dtype value.
- prop_tuple = Property(name="Location", value='(39.12; 67.19)', dtype='2-tuple')
- tuple_value = prop_tuple.values[0] # As the formed tuple is a list of list
- self.assertEqual(tuple_value[0], '39.12')
- self.assertEqual(tuple_value[1], '67.19')
- # Test invalid tuple length
- with self.assertRaises(ValueError):
- _ = Property(name="Public-Key", value='(5689; 1254; 687)', dtype='2-tuple')
- prop3 = Property('myprop', value=0, dtype=DType.int)
- self.assertEqual(prop3.value, [0])
- self.assertEqual(prop3.values, [0])
- prop4 = Property('myprop', value=0, dtype=DType.boolean)
- self.assertEqual(prop4.value, [False])
- self.assertEqual(prop4.values, [False])
- prop5 = Property('myprop', value=0)
- self.assertEqual(prop5.value, [0])
- self.assertEqual(prop5.values, [0])
- with self.assertRaises(ValueError):
- Property(name="dateprop", dtype=DType.date, value=['20190707'])
- with self.assertRaises(ValueError):
- Property(name="timeprop", dtype=DType.time, value=['11.11.11'])
- with self.assertRaises(ValueError):
- Property(name="datetimeprop", dtype=DType.datetime, value=['20190707'])
- with self.assertRaises(ValueError):
- Property(name="intprop", dtype=DType.int, value=[2, "Hello!", 4])
- prop6 = Property('myprop', values=["(8; 9; 10)", "(11; 12; 13)"], dtype="3-tuple")
- self.assertEqual(len(prop6.values), 2)
- prop7 = Property('myprop', values=[["0", "1", "2"], [3, 4, 5]], dtype="3-tuple")
- self.assertEqual(len(prop7.values), 2)
- prop8 = Property('myprop', values=["(8; 9; 10)", ["0", "1", "2"], [3, 4, 5]], dtype="3-tuple")
- self.assertEqual(len(prop8.values), 3)
- def test_value_append(self):
- # Test append w/o Property value or dtype
- prop = Property(name="append")
- prop.append(1)
- self.assertEqual(prop.dtype, DType.int)
- self.assertEqual(prop.values, [1])
- # Test append with Property dtype.
- prop = Property(name="append", dtype="int")
- prop.append(3)
- self.assertEqual(prop.values, [3])
- # Test append with Property value
- prop = Property(name="append", value=[1, 2])
- prop.append(3)
- self.assertEqual(prop.values, [1, 2, 3])
- # Test append with Property list value
- prop = Property(name="append", value=[1, 2])
- prop.append([3])
- self.assertEqual(prop.values, [1, 2, 3])
- # Test append of empty values, make sure 0 and False are properly handled
- prop = Property(name="append")
- prop.append(None)
- prop.append("")
- prop.append([])
- prop.append({})
- self.assertEqual(prop.values, [])
- prop.append(0)
- self.assertEqual(prop.values, [0])
- prop.values = None
- prop.dtype = None
- prop.append(False)
- self.assertEqual(prop.values, [False])
- prop = Property(name="append", value=[1, 2])
- prop.append(None)
- prop.append("")
- prop.append([])
- prop.append({})
- self.assertEqual(prop.values, [1, 2])
- prop.append(0)
- self.assertEqual(prop.values, [1, 2, 0])
- # Test fail append with multiple values
- prop = Property(name="append", value=[1, 2, 3])
- with self.assertRaises(ValueError):
- prop.append([4, 5])
- self.assertEqual(prop.values, [1, 2, 3])
- # Test fail append with mismatching dtype
- prop = Property(name="append", value=[1, 2], dtype="int")
- with self.assertRaises(ValueError):
- prop.append([3.14])
- with self.assertRaises(ValueError):
- prop.append([True])
- with self.assertRaises(ValueError):
- prop.append(["5.927"])
- self.assertEqual(prop.values, [1, 2])
- # Test strict flag
- prop.append(3.14, strict=False)
- prop.append(True, strict=False)
- prop.append("5.927", strict=False)
- self.assertEqual(prop.values, [1, 2, 3, 1, 5])
- # Make sure non-convertible values still raise an error
- with self.assertRaises(ValueError):
- prop.append("invalid")
- self.assertEqual(prop.values, [1, 2, 3, 1, 5])
- prop5 = Property("test", value="a string")
- prop5.append("Freude")
- self.assertEqual(len(prop5), 2)
- self.assertRaises(ValueError, prop5.append, "[a, b, c]")
- prop6 = Property(name="prop", value=["A Abraham", "B Barnes", "C Clark"],
- dtype=DType.person)
- prop6.append("D Dickins")
- self.assertEqual(len(prop6), 4)
- self.assertRaises(ValueError, prop6.append, 1)
- self.assertRaises(ValueError, prop6.append, 1.3)
- self.assertRaises(ValueError, prop6.append, True)
- prop7 = Property(name="prop", value=["https://en.wikipedia.org/wiki/Earth"],
- dtype=DType.url)
- prop7.append("https://en.wikipedia.org/wiki/Mars")
- self.assertEqual(len(prop7), 2)
- self.assertRaises(ValueError, prop7.append, 1)
- self.assertRaises(ValueError, prop7.append, 1.3)
- self.assertRaises(ValueError, prop7.append, True)
- prop8 = Property(name="prop", value=["Earth is No. 3."], dtype=DType.text)
- prop8.append("Mars is No. 4.")
- self.assertEqual(len(prop8), 2)
- self.assertRaises(ValueError, prop8.append, 1)
- self.assertRaises(ValueError, prop8.append, 1.3)
- self.assertRaises(ValueError, prop8.append, True)
- prop9 = Property(name="tuple-test", dtype="3-tuple", values="(1; 2; 3)")
- prop9.append("(7; 8; 9)")
- self.assertEqual(len(prop9), 2)
- self.assertRaises(ValueError, prop9.append, "(10; 11)")
- prop9.append([[2, 3, 4]])
- self.assertEqual(len(prop9), 3)
- self.assertRaises(ValueError, prop9.append, [[10, 11]])
- prop10 = Property(name="prop10", dtype="date", values=['2011-12-01', '2011-12-02'])
- with self.assertRaises(ValueError):
- prop10.append('2011-12-03', strict=True)
- self.assertEqual(prop10.values, [datetime.date(2011, 12, 1), datetime.date(2011, 12, 2)])
- prop10.append('2011-12-03', strict=False)
- self.assertEqual(prop10.values, [datetime.date(2011, 12, 1), datetime.date(2011, 12, 2),
- datetime.date(2011, 12, 3)])
- prop10.append([datetime.date(2011, 12, 4)], strict=True)
- self.assertEqual(prop10.values, [datetime.date(2011, 12, 1), datetime.date(2011, 12, 2),
- datetime.date(2011, 12, 3), datetime.date(2011, 12, 4)])
- prop11 = Property(name="prop11", dtype="time", values=['12:00:01', '12:00:02'])
- with self.assertRaises(ValueError):
- prop11.append('12:00:03', strict=True)
- self.assertEqual(prop11.values, [datetime.time(12, 0, 1), datetime.time(12, 0, 2)])
- prop11.append('12:00:03', strict=False)
- self.assertEqual(prop11.values, [datetime.time(12, 0, 1), datetime.time(12, 0, 2),
- datetime.time(12, 0, 3)])
- prop11.append([datetime.time(12, 0, 4)], strict=True)
- self.assertEqual(prop11.values, [datetime.time(12, 0, 1), datetime.time(12, 0, 2),
- datetime.time(12, 0, 3), datetime.time(12, 0, 4)])
- prop12 = Property(name="prop12", dtype="datetime",
- values=['2011-12-01 12:00:01', '2011-12-01 12:00:02'])
- with self.assertRaises(ValueError):
- prop12.append('2011-12-01 12:00:03', strict=True)
- self.assertEqual(prop12.values, [datetime.datetime(2011, 12, 1, 12, 0, 1),
- datetime.datetime(2011, 12, 1, 12, 0, 2)])
- prop12.append('2011-12-01 12:00:03', strict=False)
- self.assertEqual(prop12.values, [datetime.datetime(2011, 12, 1, 12, 0, 1),
- datetime.datetime(2011, 12, 1, 12, 0, 2),
- datetime.datetime(2011, 12, 1, 12, 0, 3)])
- prop12.append([datetime.datetime(2011, 12, 1, 12, 0, 4)], strict=True)
- self.assertEqual(prop12.values, [datetime.datetime(2011, 12, 1, 12, 0, 1),
- datetime.datetime(2011, 12, 1, 12, 0, 2),
- datetime.datetime(2011, 12, 1, 12, 0, 3),
- datetime.datetime(2011, 12, 1, 12, 0, 4)])
- def test_value_extend(self):
- prop = Property(name="extend")
- # Test extend w/o Property value or dtype.
- val = [1, 2, 3]
- prop.extend(val)
- self.assertEqual(prop.dtype, DType.int)
- self.assertEqual(prop.values, val)
- # Extend with single value.
- prop.extend(4)
- self.assertEqual(prop.values, [1, 2, 3, 4])
- # Extend with list value.
- prop.extend([5, 6])
- self.assertEqual(prop.values, [1, 2, 3, 4, 5, 6])
- # Test extend w/o Property value
- prop = Property(name="extend", dtype="float")
- prop.extend([1.0, 2.0, 3.0])
- self.assertEqual(prop.values, [1.0, 2.0, 3.0])
- # Test extend with Property value
- prop = Property(name="extend", value=10)
- prop.extend([20, 30, '40'])
- self.assertEqual(prop.values, [10, 20, 30, 40])
- # Test extend fail with mismatching dtype
- with self.assertRaises(ValueError):
- prop.extend(['5', 6, 7])
- with self.assertRaises(ValueError):
- prop.extend([5, 6, 'a'])
- # Test extend via Property
- prop = Property(name="extend", value=["a", "b"])
- ext_prop = Property(name="value extend", value="c")
- prop.extend(ext_prop)
- self.assertEqual(prop.values, ["a", "b", "c"])
- ext_prop.values = ["d", "e"]
- prop.extend(ext_prop)
- self.assertEqual(prop.values, ["a", "b", "c", "d", "e"])
- ext_prop = Property(name="value extend", value=[1, 2, 3])
- with self.assertRaises(ValueError):
- prop.extend(ext_prop)
- self.assertEqual(prop.values, ["a", "b", "c", "d", "e"])
- # Test extend via Property unit check
- prop = Property(name="extend", value=[1, 2], unit="mV")
- ext_prop = Property(name="extend", value=[3, 4], unit="mV")
- prop.extend(ext_prop)
- self.assertEqual(prop.values, [1, 2, 3, 4])
- ext_prop.unit = "kV"
- with self.assertRaises(ValueError):
- prop.extend(ext_prop)
- self.assertEqual(prop.values, [1, 2, 3, 4])
- ext_prop.unit = ""
- with self.assertRaises(ValueError):
- prop.extend(ext_prop)
- self.assertEqual(prop.values, [1, 2, 3, 4])
- # Test strict flag
- prop = Property(name="extend", value=[1, 2], dtype="int")
- with self.assertRaises(ValueError):
- prop.extend([3.14, True, "5.927"])
- self.assertEqual(prop.values, [1, 2])
- prop.extend([3.14, True, "5.927"], strict=False)
- self.assertEqual(prop.values, [1, 2, 3, 1, 5])
- # Make sure non-convertible values still raise an error
- with self.assertRaises(ValueError):
- prop.extend([6, "some text"])
- prop1 = Property(name="prop", value=["A Abraham", "B Barnes", "C Clark"],
- dtype=DType.person)
- prop1.extend("D Dickins")
- self.assertEqual(len(prop1), 4)
- self.assertRaises(ValueError, prop1.extend, 1)
- self.assertRaises(ValueError, prop1.extend, 1.3)
- self.assertRaises(ValueError, prop1.extend, True)
- prop2 = Property(name="prop", value=["https://en.wikipedia.org/wiki/Earth"],
- dtype=DType.url)
- prop2.extend("https://en.wikipedia.org/wiki/Mars")
- self.assertEqual(len(prop2), 2)
- self.assertRaises(ValueError, prop2.extend, 1)
- self.assertRaises(ValueError, prop2.extend, 1.3)
- self.assertRaises(ValueError, prop2.extend, True)
- prop3 = Property(name="prop", value=["Earth is No. 3."], dtype=DType.text)
- prop3.extend("Mars is No. 4.")
- self.assertEqual(len(prop3), 2)
- self.assertRaises(ValueError, prop3.extend, 1)
- self.assertRaises(ValueError, prop3.extend, 1.3)
- self.assertRaises(ValueError, prop3.extend, True)
- prop4 = Property(name="tuple-test", dtype="3-tuple", values="(1; 2; 3)")
- prop4.extend(["(7; 8; 9)", "(10; 11; 12)"])
- self.assertEqual(len(prop4), 3)
- self.assertRaises(ValueError, prop4.extend, "(10; 11)")
- prop4.extend([[2, 3, 4], [5, 6, 7]])
- self.assertEqual(len(prop4), 5)
- self.assertRaises(ValueError, prop4.extend, [[10, 11]])
- prop4 = Property(name="prop4", dtype="date", values=['2011-12-01', '2011-12-02'])
- with self.assertRaises(ValueError):
- prop4.extend('2011-12-03', strict=True)
- self.assertEqual(prop4.values, [datetime.date(2011, 12, 1), datetime.date(2011, 12, 2)])
- prop4.extend('2011-12-03', strict=False)
- self.assertEqual(prop4.values, [datetime.date(2011, 12, 1), datetime.date(2011, 12, 2),
- datetime.date(2011, 12, 3)])
- prop4.extend([datetime.date(2011, 12, 4)], strict=True)
- self.assertEqual(prop4.values, [datetime.date(2011, 12, 1), datetime.date(2011, 12, 2),
- datetime.date(2011, 12, 3), datetime.date(2011, 12, 4)])
- prop4.extend([datetime.date(2011, 12, 5), datetime.date(2011, 12, 6)], strict=True)
- self.assertEqual(prop4.values, [datetime.date(2011, 12, 1), datetime.date(2011, 12, 2),
- datetime.date(2011, 12, 3), datetime.date(2011, 12, 4),
- datetime.date(2011, 12, 5), datetime.date(2011, 12, 6)])
- with self.assertRaises(ValueError):
- prop4.extend(['2011-12-03', 'abc'], strict=False)
- prop5 = Property(name="prop5", dtype="time", values=['12:00:01', '12:00:02'])
- with self.assertRaises(ValueError):
- prop5.extend('12:00:03', strict=True)
- self.assertEqual(prop5.values, [datetime.time(12, 0, 1), datetime.time(12, 0, 2)])
- prop5.extend('12:00:03', strict=False)
- self.assertEqual(prop5.values, [datetime.time(12, 0, 1), datetime.time(12, 0, 2),
- datetime.time(12, 0, 3)])
- prop5.extend([datetime.time(12, 0, 4)], strict=True)
- self.assertEqual(prop5.values, [datetime.time(12, 0, 1), datetime.time(12, 0, 2),
- datetime.time(12, 0, 3), datetime.time(12, 0, 4)])
- prop5.extend([datetime.time(12, 0, 5), datetime.time(12, 0, 6)], strict=True)
- self.assertEqual(prop5.values, [datetime.time(12, 0, 1), datetime.time(12, 0, 2),
- datetime.time(12, 0, 3), datetime.time(12, 0, 4),
- datetime.time(12, 0, 5), datetime.time(12, 0, 6)])
- with self.assertRaises(ValueError):
- prop4.extend(['12:00:07', 'abc'], strict=False)
- prop6 = Property(name="prop6", dtype="datetime",
- values=['2011-12-01 12:00:01', '2011-12-01 12:00:02'])
- with self.assertRaises(ValueError):
- prop6.extend('2011-12-01 12:00:03', strict=True)
- self.assertEqual(prop6.values, [datetime.datetime(2011, 12, 1, 12, 0, 1),
- datetime.datetime(2011, 12, 1, 12, 0, 2)])
- prop6.extend('2011-12-01 12:00:03', strict=False)
- self.assertEqual(prop6.values, [datetime.datetime(2011, 12, 1, 12, 0, 1),
- datetime.datetime(2011, 12, 1, 12, 0, 2),
- datetime.datetime(2011, 12, 1, 12, 0, 3)])
- prop6.extend([datetime.datetime(2011, 12, 1, 12, 0, 4)], strict=True)
- self.assertEqual(prop6.values, [datetime.datetime(2011, 12, 1, 12, 0, 1),
- datetime.datetime(2011, 12, 1, 12, 0, 2),
- datetime.datetime(2011, 12, 1, 12, 0, 3),
- datetime.datetime(2011, 12, 1, 12, 0, 4)])
- prop6.extend([datetime.datetime(2011, 12, 1, 12, 0, 5),
- datetime.datetime(2011, 12, 1, 12, 0, 6)], strict=True)
- self.assertEqual(prop6.values, [datetime.datetime(2011, 12, 1, 12, 0, 1),
- datetime.datetime(2011, 12, 1, 12, 0, 2),
- datetime.datetime(2011, 12, 1, 12, 0, 3),
- datetime.datetime(2011, 12, 1, 12, 0, 4),
- datetime.datetime(2011, 12, 1, 12, 0, 5),
- datetime.datetime(2011, 12, 1, 12, 0, 6)])
- with self.assertRaises(ValueError):
- prop4.extend(['2011-12-03 12:00:07', 'abc'], strict=False)
- def test_insert(self):
- prop1 = Property(name="prop1", dtype="int", values=[0,2])
- prop1.insert(1, 1)
- self.assertEqual(prop1.values, [0, 1, 2])
- prop1.insert(4, 3)
- self.assertEqual(prop1.values, [0, 1, 2, 3])
- with self.assertRaises(ValueError):
- prop1.append([4, 5])
- self.assertEqual(prop1.values, [0, 1, 2, 3])
- with self.assertRaises(ValueError):
- prop1.insert(1, 3.14)
- with self.assertRaises(ValueError):
- prop1.insert(1, True)
- with self.assertRaises(ValueError):
- prop1.insert(1, "5.927")
- self.assertEqual(prop1.values, [0, 1, 2, 3])
- prop2 = Property(name="prop2", dtype="int", values=[1, 2])
- prop2.insert(1, 3.14, strict=False)
- self.assertEqual(prop2.values, [1, 3, 2])
- prop2.insert(1, True, strict=False)
- self.assertEqual(prop2.values, [1, 1, 3, 2])
- prop2.insert(1, "5.927", strict=False)
- self.assertEqual(prop2.values, [1, 5, 1, 3, 2])
-
- prop3 = Property(name="prop3", dtype="string", values=["a", "c"])
- prop3.insert(1, "b")
- self.assertEqual(prop3.values, ["a", "b", "c"])
- prop3.insert(1, 1, strict=False)
- self.assertEqual(prop3.values, ["a", "1", "b", "c"])
- with self.assertRaises(ValueError):
- prop3.insert(1, 2, strict=True)
- self.assertEqual(prop3.values, ["a", "1", "b", "c"])
- prop4 = Property(name="prop4", dtype="float", values=[1.1, 1.3])
- prop4.insert(1, 1.2)
- self.assertEqual(prop4.values, [1.1, 1.2, 1.3])
- prop4.insert(1, 2, strict=False)
- self.assertEqual(prop4.values, [1.1, 2.0, 1.2, 1.3])
- with self.assertRaises(ValueError):
- prop4.insert(1, 2, strict=True)
- self.assertEqual(prop4.values, [1.1, 2.0, 1.2, 1.3])
-
- prop5 = Property(name="prop5", dtype="2-tuple", values=["(1; 2)", "(5; 6)"])
- prop5.insert(1, "(3; 4)", strict=True)
- self.assertEqual(prop5.values, [['1', '2'], ['3', '4'], ['5', '6']])
- prop5.insert(1, [['4', '5']], strict=True)
- self.assertEqual(prop5.values, [['1', '2'], ['4', '5'], ['3', '4'], ['5', '6']])
-
- prop6 = Property(name="prop6", dtype="boolean", values=[True, True])
- prop6.insert(1, False)
- self.assertEqual(prop6.values, [True, False, True])
- prop6.insert(1, 1, strict=False)
- self.assertEqual(prop6.values, [True, True, False, True])
- with self.assertRaises(ValueError):
- prop6.insert(1, 2, strict=False)
- self.assertEqual(prop6.values, [True, True, False, True])
- with self.assertRaises(ValueError):
- prop6.insert(1, 0, strict=True)
- self.assertEqual(prop6.values, [True, True, False, True])
- prop7 = Property(name="prop7", dtype="date", values=['2011-12-01', '2011-12-04'])
- with self.assertRaises(ValueError):
- prop7.insert(1, '2011-12-03', strict=True)
- self.assertEqual(prop7.values, [datetime.date(2011, 12, 1), datetime.date(2011, 12, 4)])
- prop7.insert(1, '2011-12-03', strict=False)
- self.assertEqual(prop7.values, [datetime.date(2011, 12, 1), datetime.date(2011, 12, 3),
- datetime.date(2011, 12, 4)])
- prop7.insert(1, [datetime.date(2011, 12, 2)], strict=True)
- self.assertEqual(prop7.values, [datetime.date(2011, 12, 1), datetime.date(2011, 12, 2),
- datetime.date(2011, 12, 3), datetime.date(2011, 12, 4)])
- prop8 = Property(name="prop8", dtype="time", values=['12:00:01', '12:00:04'])
- with self.assertRaises(ValueError):
- prop8.insert(1, '12:00:03', strict=True)
- self.assertEqual(prop8.values, [datetime.time(12, 0, 1), datetime.time(12, 0, 4)])
- prop8.insert(1, '12:00:03', strict=False)
- self.assertEqual(prop8.values, [datetime.time(12, 0, 1), datetime.time(12, 0, 3),
- datetime.time(12, 0, 4)])
- prop8.insert(1, [datetime.time(12, 0, 2)], strict=True)
- self.assertEqual(prop8.values, [datetime.time(12, 0, 1), datetime.time(12, 0, 2),
- datetime.time(12, 0, 3), datetime.time(12, 0, 4)])
- prop9 = Property(name="prop9", dtype="datetime",
- values=['2011-12-01 12:00:01', '2011-12-01 12:00:04'])
- with self.assertRaises(ValueError):
- prop9.insert(1, '2011-12-01 12:00:03', strict=True)
- self.assertEqual(prop9.values, [datetime.datetime(2011, 12, 1, 12, 0, 1),
- datetime.datetime(2011, 12, 1, 12, 0, 4)])
- prop9.insert(1, '2011-12-01 12:00:03', strict=False)
- self.assertEqual(prop9.values, [datetime.datetime(2011, 12, 1, 12, 0, 1),
- datetime.datetime(2011, 12, 1, 12, 0, 3),
- datetime.datetime(2011, 12, 1, 12, 0, 4)])
- prop9.insert(1, [datetime.datetime(2011, 12, 1, 12, 0, 2)], strict=True)
- self.assertEqual(prop9.values, [datetime.datetime(2011, 12, 1, 12, 0, 1),
- datetime.datetime(2011, 12, 1, 12, 0, 2),
- datetime.datetime(2011, 12, 1, 12, 0, 3),
- datetime.datetime(2011, 12, 1, 12, 0, 4)])
-
- prop10 = Property(name="prop", value=["Earth is\n No. 3."], dtype=DType.text)
- prop10.insert(1, "Mars is\n No. 4.", strict=False)
- self.assertEqual(len(prop10), 2)
- self.assertEqual(prop10.values, ["Earth is\n No. 3.", "Mars is\n No. 4."])
- prop10.insert(1, 'A new world emerged?', strict=True)
- self.assertEqual(prop10.values, ["Earth is\n No. 3.",
- "A new world emerged?",
- "Mars is\n No. 4."])
- prop10.insert(1, 1, strict=False)
- self.assertEqual(prop10.values, ["Earth is\n No. 3.", "1",
- "A new world emerged?",
- "Mars is\n No. 4."])
- with self.assertRaises(ValueError):
- prop10.insert(1, 1, strict=True)
- self.assertEqual(prop10.values, ["Earth is\n No. 3.", "1",
- "A new world emerged?",
- "Mars is\n No. 4."])
- def test_reorder(self):
- sec = Section()
- prop_zero = Property(name="prop_zero", parent=sec)
- prop_one = Property(name="prop_one", parent=sec)
- prop_two = Property(name="prop_two", parent=sec)
- prop_three = Property(name="prop_three", parent=sec)
- self.assertEqual(sec.properties[0].name, prop_zero.name)
- self.assertEqual(sec.properties[2].name, prop_two.name)
- prop_two.reorder(0)
- self.assertEqual(sec.properties[0].name, prop_two.name)
- self.assertEqual(sec.properties[1].name, prop_zero.name)
- self.assertEqual(sec.properties[2].name, prop_one.name)
- self.assertEqual(sec.properties[3].name, prop_three.name)
- prop_two.reorder(2)
- self.assertEqual(sec.properties[0].name, prop_zero.name)
- self.assertEqual(sec.properties[1].name, prop_one.name)
- self.assertEqual(sec.properties[2].name, prop_two.name)
- self.assertEqual(sec.properties[3].name, prop_three.name)
- # Test Exception on unconnected property
- prop = Property(name="main")
- with self.assertRaises(ValueError):
- prop.reorder(0)
- def test_get_set_value(self):
- values = [1, 2, 3, 4, 5]
- prop = Property("property", value=values)
- self.assertEqual(len(prop), 5)
- for lval, pval in zip(values, prop.values):
- self.assertEqual(lval, pval)
- count = 0
- for _ in prop:
- count += 1
- self.assertEqual(count, len(values))
- prop[0] = 10
- self.assertEqual(prop[0], 10)
- with self.assertRaises(ValueError):
- prop[1] = 'stringval'
- def test_bool_conversion(self):
- # Success tests
- prop = Property(name='received', value=[1, 0, 1, 0, 1])
- self.assertEqual(prop.dtype, 'int')
- prop.dtype = DType.boolean
- self.assertEqual(prop.dtype, 'boolean')
- self.assertEqual(prop.values, [True, False, True, False, True])
- prop = Property(name='sent', value=['False', True, 'TRUE', '0', 't', 'F', '1'])
- self.assertEqual(prop.dtype, 'string')
- prop.dtype = DType.boolean
- self.assertEqual(prop.dtype, 'boolean')
- self.assertEqual(prop.values, [False, True, True, False, True, False, True])
- # Failure tests
- curr_val = [3, 0, 1, 0, 8]
- curr_type = 'int'
- prop = Property(name='received', value=curr_val)
- self.assertEqual(prop.dtype, curr_type)
- with self.assertRaises(ValueError):
- prop.dtype = DType.boolean
- self.assertEqual(prop.dtype, curr_type)
- self.assertEqual(prop.values, curr_val)
- curr_type = 'string'
- prop = Property(name='sent', value=['False', True, 'TRUE', '0', 't', '12', 'Ft'])
- self.assertEqual(prop.dtype, curr_type)
- with self.assertRaises(ValueError):
- prop.dtype = DType.boolean
- self.assertEqual(prop.dtype, curr_type)
- def test_str_to_int_convert(self):
- # Success Test
- prop = Property(name='cats_onboard', value=['3', '0', '1', '0', '8'])
- self.assertEqual(prop.dtype, 'string')
- prop.dtype = DType.int
- self.assertEqual(prop.dtype, 'int')
- self.assertEqual(prop.values, [3, 0, 1, 0, 8])
- # Failure Test
- prop = Property(name='dogs_onboard', value=['7', '20', '1 Dog', 'Seven'])
- self.assertEqual(prop.dtype, 'string')
- with self.assertRaises(ValueError):
- prop.dtype = DType.int
- self.assertEqual(prop.dtype, 'string')
- self.assertEqual(prop.values, ['7', '20', '1 Dog', 'Seven'])
- def test_name(self):
- # Test id is used when name is not provided
- prop = Property()
- self.assertIsNotNone(prop.name)
- self.assertEqual(prop.name, prop.id)
- # Test name is properly set on init
- name = "rumpelstilzchen"
- prop = Property(name)
- self.assertEqual(prop.name, name)
- # Test name can be properly set on single and connected Properties
- prop = Property()
- self.assertNotEqual(prop.name, "prop")
- prop.name = "prop"
- self.assertEqual(prop.name, "prop")
- sec = Section()
- prop_a = Property(parent=sec)
- self.assertNotEqual(prop_a.name, "prop_a")
- prop_a.name = "prop_a"
- self.assertEqual(prop_a.name, "prop_a")
- # Test property name can be changed with siblings
- prop_b = Property(name="prop_b", parent=sec)
- self.assertEqual(prop_b.name, "prop_b")
- prop_b.name = "prop"
- self.assertEqual(prop_b.name, "prop")
- # Test property name set will fail on existing sibling with same name
- with self.assertRaises(KeyError):
- prop_b.name = "prop_a"
- self.assertEqual(prop_b.name, "prop")
- def test_parent(self):
- prop = Property("property_section", parent=Section("S"))
- self.assertIsInstance(prop.parent, BaseSection)
- self.assertEqual(len(prop.parent.props), 1)
- """ Test if child is removed from _props of a parent after assigning
- a new parent to the child """
- prop_parent = prop.parent
- prop.parent = Section("S1")
- self.assertEqual(len(prop_parent.props), 0)
- self.assertIsInstance(prop.parent, BaseSection)
- self.assertIsInstance(prop.parent.props[0], BaseProperty)
- prop_parent = prop.parent
- prop.parent = None
- self.assertIsNone(prop.parent)
- self.assertEqual(len(prop_parent.props), 0)
- with self.assertRaises(ValueError):
- Property("property_prop", parent=Property("P"))
- with self.assertRaises(ValueError):
- Property("property_doc", parent=Document())
- def test_dtype(self):
- prop = Property(name="prop")
- # Test assignment of all supported dtypes.
- for curr_type in DType:
- prop.dtype = curr_type
- self.assertEqual(prop.dtype, curr_type)
- # Test assignment of dtype alias.
- prop.dtype = "bool"
- self.assertEqual(prop.dtype, "bool")
- prop.dtype = "str"
- self.assertEqual(prop.dtype, "str")
- # Test assignment of tuple.
- prop.dtype = "2-tuple"
- self.assertEqual(prop.dtype, "2-tuple")
- # Test set None
- prop.dtype = None
- self.assertIsNone(prop.dtype)
- # Test assignment fails.
- with self.assertRaises(AttributeError):
- prop.dtype = 1
- with self.assertRaises(AttributeError):
- prop.dtype = "crash and burn"
- with self.assertRaises(AttributeError):
- prop.dtype = "x-tuple"
- # Test not setting None when a property contains values.
- prop.values = [1, 2, 3]
- self.assertIsNotNone(prop.dtype)
- prop.dtype = None
- self.assertIsNotNone(prop.dtype)
- def test_get_path(self):
- doc = Document()
- sec = Section(name="parent", parent=doc)
- # Check root path for a detached Property.
- prop = Property(name="prop")
- self.assertEqual("/", prop.get_path())
- # Check absolute path of Property in a Document.
- prop.parent = sec
- self.assertEqual("/%s:%s" % (sec.name, prop.name), prop.get_path())
- def test_id(self):
- prop = Property(name="P")
- self.assertIsNotNone(prop.id)
- prop = Property("P", oid="79b613eb-a256-46bf-84f6-207df465b8f7")
- self.assertEqual(prop.id, "79b613eb-a256-46bf-84f6-207df465b8f7")
- prop = Property("P", oid="id")
- self.assertNotEqual(prop.id, "id")
- # Make sure id cannot be reset programmatically.
- with self.assertRaises(AttributeError):
- prop.id = "someId"
- def test_new_id(self):
- prop = Property(name="prop")
- old_id = prop.id
- # Test assign new generated id.
- prop.new_id()
- self.assertNotEqual(old_id, prop.id)
- # Test assign new custom id.
- old_id = prop.id
- prop.new_id("79b613eb-a256-46bf-84f6-207df465b8f7")
- self.assertNotEqual(old_id, prop.id)
- self.assertEqual("79b613eb-a256-46bf-84f6-207df465b8f7", prop.id)
- # Test invalid custom id exception.
- with self.assertRaises(ValueError):
- prop.new_id("crash and burn")
- def test_merge_check(self):
- # Test dtype check
- source = Property(name="source", dtype="string")
- destination = Property(name="destination", dtype="string")
- destination.merge_check(source)
- source.dtype = "int"
- with self.assertRaises(ValueError):
- destination.merge_check(source)
- destination.merge_check(source, False)
- # Test value check
- source = Property(name="source", value=[1, 2, 3])
- destination = Property(name="destination", value=[4, 5, 6])
- destination.merge_check(source)
- # Test value convertable
- source = Property(name="source", value=["7", "8"])
- with self.assertRaises(ValueError):
- destination.merge_check(source)
- destination.merge_check(source, False)
- # Test value not convertable
- source = Property(name="source", value=["nine", "ten"])
- with self.assertRaises(ValueError):
- destination.merge_check(source)
- with self.assertRaises(ValueError):
- destination.merge_check(source, False)
- # Test unit check
- source = Property(name="source", unit="Hz")
- destination = Property(name="destination", unit="Hz")
- destination.merge_check(source)
- source.unit = "s"
- with self.assertRaises(ValueError):
- destination.merge_check(source)
- destination.merge_check(source, False)
- # Test uncertainty check
- source = Property(name="source", uncertainty=0.0)
- destination = Property(name="destination", uncertainty=0.0)
- destination.merge_check(source)
- source.uncertainty = 10.0
- with self.assertRaises(ValueError):
- destination.merge_check(source)
- destination.merge_check(source, False)
- # Test definition check
- source = Property(name="source", definition="Freude\t schoener\nGoetterfunken\n")
- destination = Property(name="destination",
- definition="FREUDE schoener GOETTERfunken")
- destination.merge_check(source)
- source.definition = "Freunde schoender Goetterfunken"
- with self.assertRaises(ValueError):
- destination.merge_check(source)
- destination.merge_check(source, False)
- # Test reference check
- source = Property(name="source", reference="portal.g-node.org")
- destination = Property(name="destination", reference="portal.g-node.org")
- destination.merge_check(source)
- source.reference = "portal.g-node.org/odml/terminologies/v1.1"
- with self.assertRaises(ValueError):
- destination.merge_check(source)
- destination.merge_check(source, False)
- # Test value origin check
- source = Property(name="source", value_origin="file")
- destination = Property(name="destination", value_origin="file")
- destination.merge_check(source)
- source.value_origin = "other file"
- with self.assertRaises(ValueError):
- destination.merge_check(source)
- destination.merge_check(source, False)
- def test_merge(self):
- p_dst = Property("p1", value=[1, 2, 3], unit="Hz",
- definition="Freude\t schoener\nGoetterfunken\n",
- reference="portal.g-node.org", uncertainty=0.0, value_origin="file")
- p_src = Property("p2", value=[2, 4, 6], unit="Hz",
- definition="FREUDE schoener GOETTERfunken")
- test_p = p_dst.clone()
- test_p.merge(p_src)
- self.assertEqual(len(test_p.values), 5)
- p_inv_unit = p_src.clone()
- p_inv_unit.unit = 's'
- p_inv_def = p_src.clone()
- p_inv_def.definition = "Freunde schoender Goetterfunken"
- p_inv_uncert = p_src.clone()
- p_inv_uncert.uncertainty = 10.0
- p_inv_ref = p_src.clone()
- p_inv_ref.reference = "test"
- p_inv_origin = p_src.clone()
- p_inv_origin.value_origin = "other file"
- test_p = p_dst.clone()
- self.assertRaises(ValueError, test_p.merge, p_inv_unit)
- self.assertRaises(ValueError, test_p.merge, p_inv_def)
- self.assertRaises(ValueError, test_p.merge, p_inv_uncert)
- self.assertRaises(ValueError, test_p.merge, p_inv_ref)
- self.assertRaises(ValueError, test_p.merge, p_inv_origin)
- test_p.reference = None
- test_p.merge(p_src)
- self.assertEqual(test_p.reference, p_src.reference)
- test_p.unit = ""
- test_p.merge(p_src)
- self.assertEqual(test_p.unit, p_src.unit)
- test_p.uncertainty = None
- test_p.merge(p_src)
- self.assertEqual(test_p.uncertainty, p_src.uncertainty)
- test_p.definition = ""
- test_p.merge(p_src)
- self.assertEqual(test_p.definition, p_src.definition)
- test_p.value_origin = ""
- test_p.merge(p_src)
- self.assertEqual(test_p.value_origin, p_src.value_origin)
- double_p = Property("adouble", value=3.14)
- int_p = Property("aint", value=3)
- self.assertRaises(ValueError, double_p.merge, int_p)
- int_p.merge(double_p, strict=False)
- self.assertEqual(len(int_p), 2)
- def test_clone(self):
- sec = Section(name="parent")
- # Check different id.
- prop = Property(name="original")
- clone_prop = prop.clone()
- self.assertNotEqual(prop.id, clone_prop.id)
- # Check parent removal in clone.
- prop.parent = sec
- clone_prop = prop.clone()
- self.assertIsNotNone(prop.parent)
- self.assertIsNone(clone_prop.parent)
- # Check keep_id
- prop = Property(name="keepid")
- clone_prop = prop.clone(True)
- self.assertEqual(prop.id, clone_prop.id)
- def test_get_merged_equivalent(self):
- sec = Section(name="parent")
- mersec = Section(name="merged_section")
- merprop_other = Property(name="other_prop", value="other")
- merprop = Property(name="prop", value=[1, 2, 3])
- # Check None on unset parent.
- prop = Property(name="prop")
- self.assertIsNone(prop.get_merged_equivalent())
- # Check None on parent without merged Section.
- prop.parent = sec
- self.assertIsNone(prop.get_merged_equivalent())
- # Check None on parent with merged Section but no attached Property.
- sec.merge(mersec)
- self.assertIsNone(prop.get_merged_equivalent())
- # Check None on parent with merged Section and unequal Property.
- merprop_other.parent = mersec
- self.assertIsNone(prop.get_merged_equivalent())
- # Check receiving merged equivalent Property.
- merprop.parent = mersec
- self.assertIsNotNone(prop.get_merged_equivalent())
- self.assertEqual(prop.get_merged_equivalent(), merprop)
- def test_comparison(self):
- p_name = "propertyName"
- p_origin = "from over there"
- p_unit = "pears"
- p_uncertainty = "+-12"
- p_ref = "4 8 15 16 23"
- p_def = "an odml test property"
- p_dep = "yes"
- p_dep_val = "42"
- p_val = ["a", "b"]
- prop_a = Property(name=p_name, value_origin=p_origin, unit=p_unit,
- uncertainty=p_uncertainty, reference=p_ref, definition=p_def,
- dependency=p_dep, dependency_value=p_dep_val, value=p_val)
- prop_b = Property(name=p_name, value_origin=p_origin, unit=p_unit,
- uncertainty=p_uncertainty, reference=p_ref, definition=p_def,
- dependency=p_dep, dependency_value=p_dep_val, value=p_val)
- self.assertEqual(prop_a, prop_b)
- prop_b.name = 'newPropertyName'
- self.assertNotEqual(prop_a, prop_b)
- def test_export_leaf(self):
- doc = Document()
- sec_a_name = "first"
- sec_b_name = "second"
- first = doc.create_section(sec_a_name)
- second = first.create_section(sec_b_name)
- _ = first.create_section("third")
- prop_aa = first.create_property("prop1", value=[1.3])
- _ = first.create_property("prop5", value=["abc"])
- prop_ba = second.create_property("prop2", value=["words"])
- _ = second.create_property("prop3", value=["a", "b"])
- _ = second.create_property("prop4", value=[3])
- export_doc = prop_aa.export_leaf()
- self.assertEqual(len(export_doc[sec_a_name].properties), 2)
- self.assertEqual(len(export_doc[sec_a_name].sections), 0)
- export_doc = prop_ba.export_leaf()
- self.assertEqual(len(export_doc.sections), 1)
- self.assertEqual(len(export_doc[sec_a_name].properties), 2)
- self.assertEqual(len(export_doc[sec_a_name].sections), 1)
- self.assertEqual(len(export_doc[sec_a_name][sec_b_name].properties), 3)
- def test_values_cardinality(self):
- doc = Document()
- sec = Section(name="sec", type="type", parent=doc)
- # -- Test set cardinality on Property init
- # Test empty init
- prop_card_none = Property(name="prop_cardinality_empty", parent=sec)
- self.assertIsNone(prop_card_none.val_cardinality)
- # Test single int max init
- prop_card_max = Property(name="prop_cardinality_max", val_cardinality=10, parent=sec)
- self.assertEqual(prop_card_max.val_cardinality, (None, 10))
- # Test tuple init
- prop_card_min = Property(name="prop_cardinality_min", val_cardinality=(2, None), parent=sec)
- self.assertEqual(prop_card_min.val_cardinality, (2, None))
- # -- Test Property cardinality re-assignment
- prop = Property(name="prop", val_cardinality=(None, 10), parent=sec)
- self.assertEqual(prop.val_cardinality, (None, 10))
- # Test Property cardinality reset
- for non_val in [None, "", [], ()]:
- prop.val_cardinality = non_val
- self.assertIsNone(prop.val_cardinality)
- prop.val_cardinality = 1
- # Test Property cardinality single int max assignment
- prop.val_cardinality = 10
- self.assertEqual(prop.val_cardinality, (None, 10))
- # Test Property cardinality tuple max assignment
- prop.val_cardinality = (None, 5)
- self.assertEqual(prop.val_cardinality, (None, 5))
- # Test Property cardinality tuple min assignment
- prop.val_cardinality = (5, None)
- self.assertEqual(prop.val_cardinality, (5, None))
- # Test Property cardinality min/max assignment
- prop.val_cardinality = (1, 5)
- self.assertEqual(prop.val_cardinality, (1, 5))
- # -- Test Property cardinality assignment failures
- with self.assertRaises(ValueError):
- prop.val_cardinality = "a"
- with self.assertRaises(ValueError):
- prop.val_cardinality = -1
- with self.assertRaises(ValueError):
- prop.val_cardinality = (1, "b")
- with self.assertRaises(ValueError):
- prop.val_cardinality = (1, 2, 3)
- with self.assertRaises(ValueError):
- prop.val_cardinality = (-1, 1)
- with self.assertRaises(ValueError):
- prop.val_cardinality = (1, -5)
- with self.assertRaises(ValueError):
- prop.val_cardinality = (5, 1)
- def test_set_values_cardinality(self):
- doc = Document()
- sec = Section(name="sec", type="sec_type", parent=doc)
- prop = Property(name="prop", val_cardinality=1, parent=sec)
- # Test Property values cardinality min assignment
- prop.set_values_cardinality(1)
- self.assertEqual(prop.val_cardinality, (1, None))
- # Test Property values cardinality keyword min assignment
- prop.set_values_cardinality(min_val=2)
- self.assertEqual(prop.val_cardinality, (2, None))
- # Test Property values cardinality max assignment
- prop.set_values_cardinality(None, 1)
- self.assertEqual(prop.val_cardinality, (None, 1))
- # Test Property values cardinality keyword max assignment
- prop.set_values_cardinality(max_val=2)
- self.assertEqual(prop.val_cardinality, (None, 2))
- # Test Property values cardinality min max assignment
- prop.set_values_cardinality(1, 2)
- self.assertEqual(prop.val_cardinality, (1, 2))
- # Test Property values cardinality keyword min max assignment
- prop.set_values_cardinality(min_val=2, max_val=5)
- self.assertEqual(prop.val_cardinality, (2, 5))
- # Test Property values cardinality empty reset
- prop.set_values_cardinality()
- self.assertIsNone(prop.val_cardinality)
- # Test Property values cardinality keyword empty reset
- prop.set_values_cardinality(1)
- self.assertIsNotNone(prop.val_cardinality)
- prop.set_values_cardinality(min_val=None, max_val=None)
- self.assertIsNone(prop.val_cardinality)
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