multielectrode_grasp/code/python-neo/neo/test/rawiotest/test_neuralynxrawio.py

import unittest

from neo.rawio.neuralynxrawio import NeuralynxRawIO
from neo.test.rawiotest.common_rawio_test import BaseTestRawIO
from neo.rawio.neuralynxrawio import NlxHeader

import logging

logging.getLogger().setLevel(logging.INFO)


class TestNeuralynxRawIO(BaseTestRawIO, unittest.TestCase, ):
    rawioclass = NeuralynxRawIO
    entities_to_test = [
        # 'Cheetah_v4.0.2/original_data',
        'Cheetah_v5.5.1/original_data',
        'Cheetah_v5.6.3/original_data',
        'Cheetah_v5.7.4/original_data',
        'Cheetah_v6.3.2/incomplete_blocks']
    files_to_download = [
        'Cheetah_v4.0.2/original_data/CSC14_trunc.Ncs',
        'Cheetah_v5.5.1/original_data/CheetahLogFile.txt',
        'Cheetah_v5.5.1/original_data/CheetahLostADRecords.txt',
        'Cheetah_v5.5.1/original_data/Events.nev',
        'Cheetah_v5.5.1/original_data/STet3a.nse',
        'Cheetah_v5.5.1/original_data/STet3b.nse',
        'Cheetah_v5.5.1/original_data/Tet3a.ncs',
        'Cheetah_v5.5.1/original_data/Tet3b.ncs',
        'Cheetah_v5.5.1/plain_data/STet3a.txt',
        'Cheetah_v5.5.1/plain_data/STet3b.txt',
        'Cheetah_v5.5.1/plain_data/Tet3a.txt',
        'Cheetah_v5.5.1/plain_data/Tet3b.txt',
        'Cheetah_v5.5.1/plain_data/Events.txt',
        'Cheetah_v5.5.1/README.txt',
        'Cheetah_v5.6.3/original_data/CheetahLogFile.txt',
        'Cheetah_v5.6.3/original_data/CheetahLostADRecords.txt',
        'Cheetah_v5.6.3/original_data/Events.nev',
        'Cheetah_v5.6.3/original_data/CSC1.ncs',
        'Cheetah_v5.6.3/original_data/CSC2.ncs',
        'Cheetah_v5.6.3/original_data/TT1.ntt',
        'Cheetah_v5.6.3/original_data/TT2.ntt',
        'Cheetah_v5.6.3/original_data/VT1.nvt',
        'Cheetah_v5.6.3/plain_data/Events.txt',
        'Cheetah_v5.6.3/plain_data/CSC1.txt',
        'Cheetah_v5.6.3/plain_data/CSC2.txt',
        'Cheetah_v5.6.3/plain_data/TT1.txt',
        'Cheetah_v5.6.3/plain_data/TT2.txt',
        'Cheetah_v5.7.4/original_data/CSC1.ncs',
        'Cheetah_v5.7.4/original_data/CSC2.ncs',
        'Cheetah_v5.7.4/original_data/CSC3.ncs',
        'Cheetah_v5.7.4/original_data/CSC4.ncs',
        'Cheetah_v5.7.4/original_data/CSC5.ncs',
        'Cheetah_v5.7.4/original_data/Events.nev',
        'Cheetah_v5.7.4/plain_data/CSC1.txt',
        'Cheetah_v5.7.4/plain_data/CSC2.txt',
        'Cheetah_v5.7.4/plain_data/CSC3.txt',
        'Cheetah_v5.7.4/plain_data/CSC4.txt',
        'Cheetah_v5.7.4/plain_data/CSC5.txt',
        'Cheetah_v5.7.4/plain_data/Events.txt',
        'Cheetah_v5.7.4/README.txt',
        'Cheetah_v6.3.2/incomplete_blocks/CSC1_reduced.ncs',
        'Cheetah_v6.3.2/incomplete_blocks/Events.nev',
        'Cheetah_v6.3.2/incomplete_blocks/README.txt']


class TestNcsRecordingType(TestNeuralynxRawIO, unittest.TestCase):
    """
    Test of decoding of NlxHeader for type of recording.
    """

    ncsTypeTestFiles = [
        ('Cheetah_v4.0.2/original_data/CSC14_trunc.Ncs', 'PRE4'),
        ('Cheetah_v5.5.1/original_data/STet3a.nse', 'DIGITALLYNXSX'),
        ('Cheetah_v5.5.1/original_data/Tet3a.ncs', 'DIGITALLYNXSX'),
        ('Cheetah_v5.6.3/original_data/CSC1.ncs', 'DIGITALLYNXSX'),
        ('Cheetah_v5.6.3/original_data/TT1.ntt', 'DIGITALLYNXSX'),
        ('Cheetah_v5.7.4/original_data/CSC1.ncs', 'DIGITALLYNXSX'),
        ('Cheetah_v6.3.2/incomplete_blocks/CSC1_reduced.ncs', 'DIGITALLYNXSX')]

    def test_recording_types(self):

        for typeTest in self.ncsTypeTestFiles:

            filename = self.get_filename_path(typeTest[0])
            hdr = NlxHeader.build_for_file(filename)
            self.assertEqual(hdr.type_of_recording(), typeTest[1])


if __name__ == "__main__":
    unittest.main()