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@@ -226,6 +226,79 @@
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$\Rightarrow$ Storing to NIX can be embedded into the recording software \url{http://relacs.sourceforge.net}.
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\end{frame}
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+\begin{frame}{Reproducibility crisis also in the Neurosciences}
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+ \begin{center}
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+ \includegraphics[width=0.75\columnwidth]{resources/standards}\rotatebox{90}{\url{https://xkcd.com/927}}\\
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+ \vspace{1ex}
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+ \textit{...and the other 40+ ephys data standards?}
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+ \end{center}
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+\end{frame}
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+
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+
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+\begin{frame}{Neo}
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+ \begin{columns}
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+ \begin{column}{6.5cm}
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+ \includegraphics[height=.8\textheight]{resources/neo_IODiagram.png}
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+ \end{column}
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+ \begin{column}{5.5cm}
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+ \includegraphics[width=4cm]{resources/neo_logo_transparent.png}
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+ \begin{itemize}
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+ \item interfaces to 40+ ephys properietary \& open formats in various versions
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+ \vspace{1ex}
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+ \item provides a standardized ephys data \textbf{representation}, it is not a file format.
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+ \item reads all formats, but provides writing capability only for selected open formats.
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+ \end{itemize}
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+ \end{column}
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+ \end{columns}
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+\end{frame}
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+
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+
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+\begin{frame}{Neo}
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+ A basis for
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+ \begin{itemize}
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+ \item format conversion
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+ \item custom data analysis
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+ \item diverse tools dealing with ephys data
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+ \end{itemize}
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+ \vspace{1ex}
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+ \includegraphics[width=\textwidth]{resources/neo_as_interface.png}
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+\end{frame}
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+
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+
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+\begin{frame}{Elephant}
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+ \begin{columns}
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+ \begin{column}{5cm}
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+ \includegraphics[width=\textwidth]{resources/elephant_structure.png}
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+ \end{column}
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+ \begin{column}{7cm}
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+ Electrophysiology Analysis Toolkit
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+ \begin{itemize}
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+ \item electrophysiology data preprocessing
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+ \item spiketrain analysis
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+ \item local field potential analysis
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+ \end{itemize}
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+ \end{column}
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+ \end{columns}
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+\end{frame}
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+
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+
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+\begin{frame}{Viziphant}
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+ \begin{columns}
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+ \begin{column}{6cm}
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+ \includegraphics[width=\textwidth]{resources/viziphant_logo_sidebar.png}
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+ \end{column}
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+ \begin{column}{6cm}
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+ Quick and easy visualizations
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+ \begin{itemize}
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+ \item of Neo based electrophysiology data
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+ \item of Elephant analysis results
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+ \end{itemize}
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+ \end{column}
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+ \end{columns}
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+\end{frame}
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+
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+
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+
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\begin{frame}{NIX-NEO Workshop}
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In this workshop we will ...
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@@ -233,6 +306,8 @@
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\item introduce the ideas and concepts of the NIX data model.
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\item show how various data types can be represented with it.
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\item show how to use and find data in NIX files.
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+ \item become familiar with the Neo representation of electrophysiology data.
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+ \item learn how to used Elephant and Viziphant for data analysis and visualizations.
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\item use a lot of hands-on exercises.
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\end{itemize}
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\end{frame}
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@@ -332,4 +407,4 @@
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}
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\end{frame}
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-\end{document}
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+\end{document}
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