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alm_1_test_v6.xml 6.6 KB

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  1. <?xml version="1.0" encoding="UTF-8"?>
  2. <?xml-stylesheet type="text/xsl" href="odmlTerms.xsl"?>
  3. <?xml-stylesheet type="text/xsl" href="odml.xsl"?>
  4. <odML version="1.1">
  5. <id>f652679e-baa0-4928-b52f-581a2a67a9b3</id>
  6. <version>1.0</version>
  7. <author>Jeff Teeters</author>
  8. <date>2018-10-08</date>
  9. <section>
  10. <id>5d63006f-d9ec-4bfc-aa64-23d097c8ed39</id>
  11. <type>subject</type>
  12. <name>Subject</name>
  13. <definition>The investigated experimental subject (animal or person).
  14. May contain the Cell and Preparation sections as subsections.</definition>
  15. <include>http://portal.g-node.org/odml/terminologies/v1.1/subject/subject.xml</include>
  16. <property>
  17. <id>860ec77d-efa2-4f4b-b8ea-c42744c725ea</id>
  18. <name>Comment</name>
  19. <value></value>
  20. <definition>A general comment on a specific subject.</definition>
  21. <type>text</type>
  22. </property>
  23. <property>
  24. <id>e65d0d90-64a9-4107-b38a-b17eba32fa50</id>
  25. <name>Species</name>
  26. <value>Mus musculus</value>
  27. <definition>The scientific name of the species e.g. Apis mellifera, Homo sapiens.</definition>
  28. <type>string</type>
  29. </property>
  30. <property>
  31. <id>2adbcb21-a5b9-43fa-8d8f-4f972eaa7a6a</id>
  32. <name>Genus</name>
  33. <value></value>
  34. <definition>The Genus of the studied subject.</definition>
  35. <type>string</type>
  36. </property>
  37. <property>
  38. <id>c3215f50-39b4-4198-aad5-8eebcc61f766</id>
  39. <name>TrivialName</name>
  40. <value></value>
  41. <definition>The trivial name of the species like Honeybee, Human.</definition>
  42. <type>string</type>
  43. </property>
  44. <property>
  45. <id>c31ab8fe-9e38-4bc7-b265-491fdd15e09c</id>
  46. <name>Gender</name>
  47. <value></value>
  48. <definition>Male or female?</definition>
  49. <type>string</type>
  50. </property>
  51. <property>
  52. <id>cdfdda02-bfa3-45e4-8f7b-cb28df82da68</id>
  53. <name>Birthday</name>
  54. <value>2018-10-08</value>
  55. <definition>The birthday. Age can be inferred from the date of recording.</definition>
  56. <type>date</type>
  57. </property>
  58. <property>
  59. <id>dcdccb85-f61a-46af-a877-8b751cfcae55</id>
  60. <name>Age</name>
  61. <value></value>
  62. <definition>The age of the subject since birth. E.g. P19, or 5 days.</definition>
  63. <type>string</type>
  64. </property>
  65. <property>
  66. <id>6dee20c3-2dc0-4af6-9c0f-c5e1200ac392</id>
  67. <name>Strain</name>
  68. <value>pl56</value>
  69. <definition>The strain the subject was taken from. E.g. a specific genetic variation etc.</definition>
  70. <type>string</type>
  71. </property>
  72. <property>
  73. <id>be7c1285-da70-412c-9ddf-63f69ddf369b</id>
  74. <name>CellLine</name>
  75. <value></value>
  76. <definition>.</definition>
  77. <type>string</type>
  78. </property>
  79. <property>
  80. <id>aed6050d-4c3c-4aa2-a5cd-c909cf031593</id>
  81. <name>Population</name>
  82. <value></value>
  83. <definition>The population this subject is offspring of. This may be the bee hive, the ant colony, etc.</definition>
  84. <type>string</type>
  85. </property>
  86. <property>
  87. <id>fe566ff3-af66-4ccb-8a93-691c5bdf8ddf</id>
  88. <name>Label</name>
  89. <value></value>
  90. <definition>If the subject has been labeled in a specific way. The label can be described here.</definition>
  91. <type>string</type>
  92. </property>
  93. <property>
  94. <id>91f30cea-9f7e-494e-a8ba-21bcdb1421b9</id>
  95. <name>HealthStatus</name>
  96. <value></value>
  97. <definition>Information about the health status of this subject.</definition>
  98. <type>string</type>
  99. </property>
  100. <property>
  101. <id>bc31ff0b-b022-4bc7-bdcb-b060db24053d</id>
  102. <name>DevelopmentalStage</name>
  103. <value></value>
  104. <definition>The developmental stage of the subject. E.g. "embryonal", "adult", "larval" etc.</definition>
  105. <type>string</type>
  106. </property>
  107. <property>
  108. <id>0cf2bc42-dc58-4937-99ac-630ee84caa3e</id>
  109. <name>ConactInformation</name>
  110. <value></value>
  111. <definition>How to get in contact with this subject.</definition>
  112. <type>text</type>
  113. </property>
  114. <property>
  115. <id>b9a1c928-51d5-46e4-84f6-cc00f7bca4fe</id>
  116. <name>Size</name>
  117. <value>0.0</value>
  118. <definition>The size of the subject. This value may be used context dependent. Size could be length for a fish,
  119. height for a human subject, or shoulder height for a horse etc...</definition>
  120. <type>float</type>
  121. </property>
  122. <property>
  123. <id>9c36b858-a04a-4510-98ab-bc693d5cc28e</id>
  124. <name>Weight</name>
  125. <value>0.0</value>
  126. <definition>The weight of this subject.</definition>
  127. <type>float</type>
  128. </property>
  129. </section>
  130. <section>
  131. <id>2774adc8-bfaa-4e74-8d49-63bf667c4ce2</id>
  132. <type>experiment</type>
  133. <name>Experiment</name>
  134. <definition>Specification of an experiment. The Experiment is part of a Project and the recorded data for a specific
  135. Experiment are found in Datasets. Possible subsections are, for example, Dataset and Stimulus.</definition>
  136. <include>http://portal.g-node.org/odml/terminologies/v1.1/experiment/experiment.xml</include>
  137. <property>
  138. <id>5f38b0fe-cdcb-4c6c-a92d-48c53e8236a5</id>
  139. <name>Description</name>
  140. <value>Recordings from mouse ALM.</value>
  141. <definition>A description of the experiment.</definition>
  142. <type>text</type>
  143. </property>
  144. <property>
  145. <id>4883e316-17ca-47e2-a988-3ec51415f48e</id>
  146. <name>DataDOI</name>
  147. <value>10.6080/K0MS3QNT</value>
  148. <definition>A unique Digital object identifier of data.</definition>
  149. <type>string</type>
  150. </property>
  151. <property>
  152. <id>8a1dfb5e-5157-4a29-914a-1634d5c21936</id>
  153. <name>Subtype</name>
  154. <value></value>
  155. <type>string</type>
  156. </property>
  157. <property>
  158. <id>313cf3f0-79ce-4b4e-95ae-0e1c45e15994</id>
  159. <name>ProjectName</name>
  160. <value></value>
  161. <definition>The name of the project this experiment belongs to.</definition>
  162. <type>string</type>
  163. </property>
  164. <property>
  165. <id>411e0701-6c52-48d6-b015-1b54c9a238de</id>
  166. <name>ProjectID</name>
  167. <value></value>
  168. <definition>The ID of the project this experiment belongs to.</definition>
  169. <type>string</type>
  170. </property>
  171. </section>
  172. <section>
  173. <id>5879d13e-b506-4a12-ae2d-b2a210358fc9</id>
  174. <name>BrainRegions</name>
  175. <property>
  176. <id>1aaba6a3-4e9c-42b3-b292-eddb6fc010e9</id>
  177. <name>BrainRegions</name>
  178. <value>ALM</value>
  179. <definition>Brain regions recorded from.</definition>
  180. <type>string</type>
  181. </property>
  182. </section>
  183. <repository>http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml</repository>
  184. </odML>