psth.xml 3.7 KB

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  1. <?xml version="1.0" encoding="UTF-8"?>
  2. <?xml-stylesheet type="text/xsl" href="odmlTerms.xsl"?>
  3. <odML version="1.1">
  4. <repository>https://terminologies.g-node.org/v1.1/terminologies.xml</repository>
  5. <version>1.0</version>
  6. <date>2011-01-21</date>
  7. <!-- ********************************************************* -->
  8. <!-- PSTH section -->
  9. <!-- ********************************************************* -->
  10. <section>
  11. <type>analysis/psth</type>
  12. <name>PSTH</name>
  13. <definition>An Analysis-type section to describe an PSTH.</definition>
  14. <property>
  15. <name>Author</name>
  16. <type>person</type>
  17. <definition>The name of the person who did the analysis, e.g. 'John Doe' or 'Doe, John'</definition>
  18. </property>
  19. <property>
  20. <name>Date</name>
  21. <type>date</type>
  22. <definition>The date of analysis.</definition>
  23. </property>
  24. <property>
  25. <name>Description</name>
  26. <type>text</type>
  27. <definition>A general description of the analysis.</definition>
  28. </property>
  29. <property>
  30. <name>Method</name>
  31. <type>string</type>
  32. <value>[instantaneous spike rate, sliding window, discrete window]</value>
  33. <definition>The method used for creating the PSTH. instantaneous spike rate; Estimation of the firing rate by
  34. using the inverse of the interspike interval.; sliding window: The window function was slid over the data at
  35. recording resolution.; discrete window: Spikes were averaged within the window, window discretely displaced by
  36. the window width.
  37. </definition>
  38. </property>
  39. <property>
  40. <name>WindowType</name>
  41. <type>string</type>
  42. <value>[rectangular, gaussian, alpha]</value>
  43. <definition>The kind of windowing function used to cerate the PSTH.</definition>
  44. </property>
  45. <property>
  46. <name>CommandlineCall</name>
  47. <type>string</type>
  48. <definition>The command used to execute the analysis including the command line parameter.</definition>
  49. </property>
  50. <property>
  51. <name>Comment</name>
  52. <type>text</type>
  53. <definition>Specific comments on this analysis.</definition>
  54. </property>
  55. <property>
  56. <name>CodeFile</name>
  57. <type>URL</type>
  58. <definition>The URL of the applied piece of program code to actually do the analysis.</definition>
  59. </property>
  60. <property>
  61. <name>CodeRevision</name>
  62. <type>string</type>
  63. <definition>If the analysis code is under version control the revision number can be specified using this
  64. property.
  65. </definition>
  66. </property>
  67. <property>
  68. <name>ConfigFile</name>
  69. <type>URL</type>
  70. <definition>The URL to the configuration file used to run the analysis.</definition>
  71. </property>
  72. <property>
  73. <name>DatasetFile</name>
  74. <type>URL</type>
  75. <definition>The URL to the dataset file the analysis is applied on.</definition>
  76. </property>
  77. <property>
  78. <name>ResultFile</name>
  79. <type>URL</type>
  80. <definition>The URL to the results file the analysis was applied on.</definition>
  81. </property>
  82. <property>
  83. <name>ResultFigure</name>
  84. <type>URL</type>
  85. <definition>The URL to a figure file showing the results of the analysis.</definition>
  86. </property>
  87. <property>
  88. <name>PaperDOI</name>
  89. <type>text</type>
  90. <definition>If the results of this analysis have been published one can store the doi of the paper.</definition>
  91. </property>
  92. <property>
  93. <name>PaperURL</name>
  94. <type>URL</type>
  95. <definition>If the results of this analysis have been published the URL of the document can be given here
  96. </definition>
  97. </property>
  98. </section>
  99. </odML>