subject.xml 4.0 KB

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  1. <?xml version="1.0" encoding="ISO-8859-1"?>
  2. <?xml-stylesheet type="text/xsl" href="odmlTerms.xsl" xmlns:odml="http://www.g-node.org/odml"?>
  3. <!-- ********************************************************* -->
  4. <!-- Subject section -->
  5. <!-- ********************************************************* -->
  6. <odML version="1">
  7. <repository>http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml</repository>
  8. <version>1.0</version>
  9. <date>2011-01-21</date>
  10. <section>
  11. <type>subject</type>
  12. <name>Subject</name>
  13. <definition>The investigated experimental subject (animal or person). May contain the Cell and Preparation sections
  14. as subsections.
  15. </definition>
  16. <property>
  17. <name>Comment</name>
  18. <value>
  19. <type>text</type>
  20. </value>
  21. <definition>A general comment on a specific subject.</definition>
  22. </property>
  23. <property>
  24. <name>Species</name>
  25. <value>
  26. <type>string</type>
  27. </value>
  28. <definition>The scientific name of the species e.g. Apis mellifera, Homo sapiens.</definition>
  29. </property>
  30. <property>
  31. <name>Genus</name>
  32. <value>
  33. <type>string</type>
  34. </value>
  35. <definition>The Genus of the studied subject.</definition>
  36. </property>
  37. <property>
  38. <name>TrivialName</name>
  39. <value>
  40. <type>string</type>
  41. </value>
  42. <definition>The trivial name of the species like Honeybee, Human.</definition>
  43. </property>
  44. <property>
  45. <name>Gender</name>
  46. <value>
  47. <type>string</type>
  48. </value>
  49. <definition>Male or female?</definition>
  50. </property>
  51. <property>
  52. <name>Birthday</name>
  53. <value>
  54. <type>date</type>
  55. </value>
  56. <definition>The birthday. Age can be inferred from the date of recording.</definition>
  57. </property>
  58. <property>
  59. <name>Age</name>
  60. <value>
  61. <type>string</type>
  62. </value>
  63. <definition>The age of the subject since birth. E.g. P19, or 5 days.</definition>
  64. </property>
  65. <property>
  66. <name>Strain</name>
  67. <value>
  68. <type>string</type>
  69. </value>
  70. <definition>The strain the subject was taken from. E.g. a specific genetic variation etc.</definition>
  71. </property>
  72. <property>
  73. <name>CellLine</name>
  74. <value>
  75. <type>string</type>
  76. </value>
  77. <definition>.</definition>
  78. </property>
  79. <property>
  80. <name>Population</name>
  81. <value>
  82. <type>string</type>
  83. </value>
  84. <definition>The population this subject is offspring of. This may be the bee hive, the ant colony, etc.
  85. </definition>
  86. </property>
  87. <property>
  88. <name>Label</name>
  89. <value>
  90. <type>string</type>
  91. </value>
  92. <definition>If the subject has been labeled in a specific way. The label can be described here.</definition>
  93. </property>
  94. <property>
  95. <name>HealthStatus</name>
  96. <value>
  97. <type>string</type>
  98. </value>
  99. <definition>Information about the health status of this subject.</definition>
  100. </property>
  101. <property>
  102. <name>DevelopmentalStage</name>
  103. <value>
  104. <type>string</type>
  105. </value>
  106. <definition>The developmental stage of the subject. E.g. "embryonal", "adult", "larval" etc.</definition>
  107. </property>
  108. <property>
  109. <name>ConactInformation</name>
  110. <value>
  111. <type>text</type>
  112. </value>
  113. <definition>How to get in contact with this subject.</definition>
  114. </property>
  115. <property>
  116. <name>Size</name>
  117. <value>
  118. <type>float</type>
  119. </value>
  120. <definition>The size of the subject. This value may be used context dependent. Size could be length for a fish,
  121. height for a human subject, or shoulder height for a horse etc...
  122. </definition>
  123. </property>
  124. <property>
  125. <name>Weight</name>
  126. <value>
  127. <type>float</type>
  128. </value>
  129. <definition>The weigth of this subject.</definition>
  130. </property>
  131. </section>
  132. </odML>