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subject.xml 4.3 KB

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  1. <?xml version="1.0" encoding="ISO-8859-1"?>
  2. <?xml-stylesheet type="text/xsl" href="odmlTerms.xsl" xmlns:odml="http://www.g-node.org/odml"?>
  3. <!-- ********************************************************* -->
  4. <!-- Subject section -->
  5. <!-- ********************************************************* -->
  6. <odML version="1">
  7. <repository>http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml</repository>
  8. <version>1.0</version>
  9. <date>2011-01-21</date>
  10. <section>
  11. <type>subject</type>
  12. <name>Subject</name>
  13. <definition>The investigated experimental subject (animal or person).
  14. May contain the Cell and Preparation sections as subsections.</definition>
  15. <property>
  16. <name>Comment</name>
  17. <value>
  18. <type>text</type>
  19. </value>
  20. <definition>A general comment on a specific
  21. subject. </definition>
  22. </property>
  23. <property>
  24. <name>Species</name>
  25. <value>
  26. <type>string</type>
  27. </value>
  28. <definition>The scientific name of the species e.g. Apis
  29. mellifera, Homo sapiens.</definition>
  30. </property>
  31. <property>
  32. <name>Genus</name>
  33. <value>
  34. <type>string</type>
  35. </value>
  36. <definition>The Genus of the studied
  37. subject.</definition>
  38. </property>
  39. <property>
  40. <name>TrivialName</name>
  41. <value>
  42. <type>string</type>
  43. </value>
  44. <definition>The trivial name of the species like
  45. Honeybee, Human.</definition>
  46. </property>
  47. <property>
  48. <name>Gender</name>
  49. <value>
  50. <type>string</type>
  51. </value>
  52. <definition>Male or female?</definition>
  53. </property>
  54. <property>
  55. <name>Birthday</name>
  56. <value>
  57. <type>date</type>
  58. </value>
  59. <definition> The birthday. Age can be inferred from the
  60. date of recording.</definition>
  61. </property>
  62. <property>
  63. <name>Age</name>
  64. <value>
  65. <type>string</type>
  66. </value>
  67. <definition>The age of the subject since birth. E.g. P19,
  68. or 5 days.</definition>
  69. </property>
  70. <property>
  71. <name>Strain</name>
  72. <value>
  73. <type>string</type>
  74. </value>
  75. <definition>The strain the subject was taken from. E.g. a
  76. specific genetic variation etc.</definition>
  77. </property>
  78. <property>
  79. <name>CellLine</name>
  80. <value>
  81. <type>string</type>
  82. </value>
  83. <definition>.</definition>
  84. </property>
  85. <property>
  86. <name>Population</name>
  87. <value>
  88. <type>string</type>
  89. </value>
  90. <definition>The population this subject is offspring
  91. of. This may be the bee hive, the ant colony,
  92. etc.</definition>
  93. </property>
  94. <property>
  95. <name>Label</name>
  96. <value>
  97. <type>string</type>
  98. </value>
  99. <definition>If the subject has been labled in a specific
  100. way. The lable can be described here.</definition>
  101. </property>
  102. <property>
  103. <name>HealthStatus</name>
  104. <value>
  105. <type>string</type>
  106. </value>
  107. <definition>Information about the health status of this
  108. subject.</definition>
  109. </property>
  110. <property>
  111. <name>DevelopmentalStage</name>
  112. <value>
  113. <type>string</type>
  114. </value>
  115. <definition>The developemtal stage of the subject. E.g. "embroyonal", "adult", "larval" etc.</definition>
  116. </property>
  117. <property>
  118. <name>ConactInformation</name>
  119. <value>
  120. <type>text</type>
  121. </value>
  122. <definition>How to get in contact with this subject.</definition>
  123. </property>
  124. <property>
  125. <name>Size</name>
  126. <value>
  127. <type>float</type>
  128. </value>
  129. <definition>The size of the subject. This value may be used context dependent. Size could be length for a fish, heigth for a human subject, or shoulder height for a horse etc...</definition>
  130. </property>
  131. <property>
  132. <name>Weight</name>
  133. <value>
  134. <type>float</type>
  135. </value>
  136. <definition>The weigth of this subject.</definition>
  137. </property>
  138. </section>
  139. </odML>