ObjSim/src/layer/iaf_psc_exp.h

#ifndef IAF_PSC_EXP_H
#define IAF_PSC_EXP_H

#include "layer.hpp"
#include <exception>
#include <vector>

class BadProperty: public std::runtime_error
{
    public:
        BadProperty(const std::string& what): std::runtime_error(what) {}
};

class iaf_psc_exp : public layer
{
    public:
    iaf_psc_exp(int n);
    ~iaf_psc_exp();
    void calibrate();
    
    /** 
     * Independent parameters of the model. 
     */
    struct Parameters_
    {
  
      /** Membrane time constant in ms. */
      double Tau_;

      /** Membrane capacitance in pF. */
      double C_;
    
      /** Refractory period in ms. */
      double t_ref_;

      /** Resting potential in mV. */
      double U0_;

      /** External current in pA */
      double I_e_;

      /** Threshold, RELATIVE TO RESTING POTENTAIL(!).
          I.e. the real threshold is (U0_+Theta_). */
      double Theta_;

      /** reset value of the membrane potential */
      double V_reset_;

      /** Time constant of excitatory synaptic current in ms. */
      double tau_ex_;

      /** Time constant of inhibitory synaptic current in ms. */
      double tau_in_;
      
      Parameters_();  //!< Sets default parameter values
      void set(double Tau_m, double C, double t_ref, double U0,
    		  double I_e, double Theta, double V_reset, double tau_ex, double tau_in);
    };
    
    /**
     * State variables of the model.
     */
    struct State_
    {
      // state variables
      double i_0_;       // synaptic dc input current, variable 0
      double V_m_;       // membrane potential, variable 2

      int r_ref_;  // absolute refractory counter (no membrane potential propagation)
      
      State_();  //!< Default initialization
    };    


    /**
     * Internal variables of the model.
     */
    struct Variables_
    { 
      /** Amplitude of the synaptic current.
    This value is chosen such that a post-synaptic potential with
    weight one has an amplitude of 1 mV.
    @note mog - I assume this, not checked. 
      */
      //    double_t PSCInitialValue_;
    
      // time evolution operator
      double P20_;
      double P11ex_;
      double P11in_;
      double P21ex_;
      double P21in_;
      double P22_;

      int RefractoryCounts_;
    };

    
    Parameters_ P_;
    State_*     pS_;
    Variables_  V_;

    vector<float> i_syn_ex_;
    vector<float> i_syn_in_;
    vector<float> currents;

    
    virtual float* GetInputPointer(csimInputChannel num=csimInputChannel_AMPA);
    virtual int proceede(int);
    virtual int WriteSimInfo(fstream &fw);
    virtual int StartBinRec(int n, int StartNumber=0);
    virtual int reset(int t);    
    
        
};

#endif // IAF_PSC_EXP_H