WHS_SD_rat_atlas_v4_labels.ilf 33 KB

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  1. <?xml version="1.0" encoding="UTF-8" standalone="no"?>
  2. <milf>
  3. <meta>
  4. <filename>WHS_SD_rat_atlas_v4_labels.ilf</filename>
  5. </meta>
  6. <structure>
  7. <label abbreviation="Brain" color="#32a852" id="1000" name="Brain">
  8. <label abbreviation="wmt" color="#ffffff" id="1001" name="White matter">
  9. <label abbreviation="olf" color="#ffffff" id="1050" name="Olfactory white matter">
  10. <label abbreviation="lot" id="180" name="lateral olfactory tract" color="#ff00dd"/>
  11. </label>
  12. <label abbreviation="cc-ec-cing-dwm" color="#ff6e00" id="67" name="corpus callosum and associated subcortical white matter"/>
  13. <label abbreviation="ac" color="#ffffff" id="1002" name="Anterior commissure">
  14. <label abbreviation="aca" color="#7cfc00" id="36" name="anterior commissure, anterior limb" description="Name changed based on expert anatomist opinion, from 'anterior commissure, anterior part'"/>
  15. <label abbreviation="acp" color="#ffba00" id="37" name="anterior commissure, posterior limb" description="Name changed based on expert anatomist opinion, from 'anterior commissure, posterior part'"/>
  16. <label abbreviation="aci" color="#ff4fce" id="73" name="anterior commissure, intrabulbar part" description="Named anterior commissure in the WHS v3 .label (error)"/>
  17. </label>
  18. <label abbreviation="hiw" color="#ffffff" id="1003" name="Hippocampal white matter">
  19. <label abbreviation="alv" color="#ff00ff" id="6" name="alveus of the hippocampus"/>
  20. <label abbreviation="vhc" color="#ae00e8" id="38" name="ventral hippocampal commissure"/>
  21. <label abbreviation="f" color="#15c0ff" id="52" name="fornix"/>
  22. <label abbreviation="fi" color="#00ff1d" id="59" name="fimbria of the hippocampus"/>
  23. </label>
  24. <label abbreviation="cfp" color="#ffffff" id="1004" name="Corticofugal pathways">
  25. <label abbreviation="ic-cp-lfp-py" color="#ff3427" id="1" name="corticofugal tract and corona radiata" description="Name changed based on expert anatomist opinion, from 'descending corticofugal pathways'"/>
  26. <label abbreviation="pyx" color="#7209d4" id="85" name="pyramidal decussation"/>
  27. </label>
  28. <label abbreviation="ml" color="#ffffff" id="1005" name="Medial lemniscus">
  29. <label abbreviation="ml-u" color="#d4ff00" id="34" name="medial lemniscus, unspecified" description="Name changed to reflect the possibility for subdivision, from 'medial lemniscus'"/>
  30. <label abbreviation="mlx" color="#4196ff" id="84" name="medial lemniscus decussation"/>
  31. </label>
  32. <label abbreviation="tht" color="#ffffff" id="1006" name="Thalamic tracts">
  33. <label abbreviation="eml" color="#ffffff" id="1051" name="External medullary lamina">
  34. <label abbreviation="eml-u" id="249" name="external medullary lamina, unspecified" color="#aaff00"/>
  35. <label abbreviation="eml-ar" id="157" name="external medullary lamina, auditory radiation" color="#f49cff"/>
  36. </label>
  37. <label abbreviation="iml" id="291" name="internal medullary lamina" color="#ff5c0a"/>
  38. <label abbreviation="ima" id="290" name="intramedullary thalamic area" color="#9b946f"/>
  39. <label abbreviation="scp-pr" id="270" name="superior cerebellar peduncle and prerubral field" color="#d2b68c"/>
  40. <label abbreviation="ptl" id="239" name="pretectothalamic lamina" color="#db8ff7"/>
  41. <label abbreviation="mtg" color="#eeba00" id="53" name="mammillotegmental tract" description="Named mammillothalamic tract in older label files (error)"/>
  42. <label abbreviation="cst" color="#adff2f" id="54" name="commissural stria terminalis"/>
  43. <label abbreviation="fr" color="#f44345" id="60" name="fasciculus retroflexus"/>
  44. <label abbreviation="sm" color="#00ff00" id="61" name="stria medullaris thalami" description="Name changed based on expert anatomist opinion, from 'stria medullaris of the thalamus'"/>
  45. <label abbreviation="st" color="#ee7533" id="62" name="stria terminalis"/>
  46. <label abbreviation="hbc" color="#45ebca" id="80" name="habenular commissure"/>
  47. </label>
  48. <label abbreviation="pc" color="#ff00da" id="63" name="posterior commissure"/>
  49. <label abbreviation="7n" color="#ffffff" id="1007" name="Facial nerve">
  50. <label abbreviation="7n-u" color="#ff19f0" id="35" name="facial nerve, unspecified" description="Name changed to reflect the possibility for subdivision, from 'facial nerve'"/>
  51. <label abbreviation="asc7" color="#b31c35" id="72" name="ascending fibers of the facial nerve"/>
  52. <label abbreviation="g7" color="#faf4f7" id="57" name="genu of the facial nerve"/>
  53. </label>
  54. <label abbreviation="ofs" color="#ffffff" id="1008" name="Optic fiber system and supraoptic decussation">
  55. <label abbreviation="2n" color="#30da00" id="41" name="optic nerve"/>
  56. <label abbreviation="opt-och" color="#267eff" id="42" name="optic tract and optic chiasm"/>
  57. <label abbreviation="sox" color="#faaa40" id="83" name="supraoptic decussation"/>
  58. </label>
  59. <label abbreviation="tew" color="#ffffff" id="1009" name="White matter of the tectum">
  60. <label abbreviation="csc" color="#21e6ff" id="46" name="commissure of the superior colliculus"/>
  61. <label abbreviation="bsc" color="#bc20ad" id="68" name="brachium of the superior colliculus"/>
  62. <label abbreviation="cic" color="#ff2a27" id="69" name="inferior colliculus, commissure"/>
  63. <label abbreviation="bic" color="#b03a48" id="146" name="inferior colliculus, brachium"/>
  64. </label>
  65. <label abbreviation="cbt" color="#ffffff" id="1010" name="Cerebellar and precerebellar white matter">
  66. <label abbreviation="icp" color="#34ff0d" id="7" name="inferior cerebellar peduncle"/>
  67. <label abbreviation="mcp" color="#86cc4c" id="78" name="middle cerebellar peduncle"/>
  68. <label abbreviation="tfp" color="#80aaff" id="79" name="transverse fibers of the pons"/>
  69. </label>
  70. <label abbreviation="bsw" color="#ffffff" id="1011" name="White matter of the brainstem">
  71. <label abbreviation="ll" color="#ffffff" id="1012" name="Lateral lemniscus">
  72. <label abbreviation="ll-c" color="#ff1d00" id="140" name="lateral lemniscus, commissure"/>
  73. <label abbreviation="ll-u" color="#ffa600" id="141" name="lateral lemniscus, unspecified" description="Name changed to reflect the possibility for subdivision, from 'lateral lemniscus'"/>
  74. </label>
  75. <label abbreviation="as" color="#ffd900" id="129" name="acoustic striae"/>
  76. <label abbreviation="tz" color="#d5ff00" id="130" name="trapezoid body"/>
  77. <label abbreviation="sp5t" color="#fa8072" id="76" name="spinal trigeminal tract"/>
  78. </label>
  79. </label>
  80. <label abbreviation="GM" color="#808080" id="1013" name="Gray matter">
  81. <label abbreviation="Tel" color="#808080" id="1052" name="Telencephalon">
  82. <label abbreviation="LamP" color="#808080" id="1053" name="Laminated pallium">
  83. <label abbreviation="OB" color="#808080" id="1020" name="Olfactory bulb">
  84. <label abbreviation="GlA" color="#0f6de6" id="64" name="Glomerular layer of the accessory olfactory bulb"/>
  85. <label abbreviation="Gl" color="#ffe300" id="65" name="Glomerular layer of the olfactory bulb"/>
  86. <label abbreviation="OB-u" color="#ff8700" id="66" name="Olfactory bulb, unspecified" description="Name changed to reflect the possibility for subdivision, 'olfactory bulb'"/>
  87. <label abbreviation="NLOT" color="#e6b843" id="502" name="Nucleus of the lateral olfactory tract"/>
  88. </label>
  89. <label abbreviation="Cx" color="#808080" id="1015" name="Cerebral cortex">
  90. <label abbreviation="HR" color="#808080" id="1055" name="Hippocampal region">
  91. <label abbreviation="HF" color="#808080" id="1021" name="Hippocampal formation">
  92. <label abbreviation="FC" color="#ff0000" id="99" name="Fasciola cinereum"/>
  93. <label abbreviation="SUB" color="#ffc000" id="100" name="Subiculum"/>
  94. <label abbreviation="CA" color="#808080" id="1022" name="Cornu Ammonis">
  95. <label abbreviation="CA1" color="#d9680d" id="98" name="Cornu ammonis 1"/>
  96. <label abbreviation="CA2" color="#ffff00" id="97" name="Cornu ammonis 2"/>
  97. <label abbreviation="CA3" color="#a5836b" id="95" name="Cornu ammonis 3"/>
  98. </label>
  99. <label abbreviation="DG" color="#5b2d0a" id="96" name="Dentate gyrus"/>
  100. </label>
  101. <label abbreviation="PHR" color="#808080" id="1023" name="Parahippocampal region">
  102. <label abbreviation="POR" color="#287082" id="108" name="Postrhinal cortex" description="Note: in Osen et al. 2019, POR was used as an abbreviation for the superior periolivary region"/>
  103. <label abbreviation="PrS" color="#507baf" id="109" name="Presubiculum"/>
  104. <label abbreviation="PaS" color="#173660" id="110" name="Parasubiculum"/>
  105. <label abbreviation="PER" color="#808080" id="1024" name="Perirhinal cortex">
  106. <label abbreviation="PER35" color="#cd33ff" id="112" name="Perirhinal area 35"/>
  107. <label abbreviation="PER36" color="#7030a0" id="113" name="Perirhinal area 36"/>
  108. </label>
  109. <label abbreviation="EC" color="#808080" id="1025" name="Entorhinal cortex">
  110. <label abbreviation="MEC" color="#7abb33" id="114" name="Medial entorhinal cortex"/>
  111. <label abbreviation="LEC" color="#5a6f2f" id="115" name="Lateral entorhinal cortex"/>
  112. </label>
  113. </label>
  114. </label>
  115. <label abbreviation="PIR" color="#808080" id="1056" name="Piriform cortex">
  116. <label abbreviation="PIR1" color="#00ccff" id="181" name="Piriform cortex, layer 1"/>
  117. <label abbreviation="PIR2" color="#0000fe" id="182" name="Piriform cortex, layer 2"/>
  118. <label abbreviation="PIR3" color="#a578dd" id="183" name="Piriform cortex, layer 3"/>
  119. </label>
  120. <label abbreviation="CgR" color="#808080" id="1057" name="Cingulate region">
  121. <label abbreviation="Cg" color="#808080" id="1018" name="Cingulate cortex">
  122. <label abbreviation="Cg1" color="#008080" id="411" name="Cingulate area 1"/>
  123. <label abbreviation="Cg2" color="#1d68eb" id="10" name="Cingulate area 2" description="Name changed to ensure consistency across hierarchical levels, from 'cingulate cortex, area 2'"/>
  124. </label>
  125. <label abbreviation="RS" color="#808080" id="1058" name="Retrosplenial cortex">
  126. <label abbreviation="RSD" color="#c849a4" id="427" name="Retrosplenial dysgranular area"/>
  127. <label abbreviation="RSG" color="#1964c8" id="430" name="Retrosplenial granular area"/>
  128. </label>
  129. </label>
  130. <label abbreviation="INS" color="#808080" id="1059" name="Insular region">
  131. <label abbreviation="AI" color="#808080" id="1060" name="Agranular insular cortex">
  132. <label abbreviation="AI-v" color="#ffc90e" id="409" name="Agranular insular cortex, ventral area"/>
  133. <label abbreviation="AI-d" color="#ff7f27" id="410" name="Agranular insular cortex dorsal area "/>
  134. <label abbreviation="AI-p" color="#b5e61d" id="424" name="Agranular insular cortex, posterior area "/>
  135. </label>
  136. <label abbreviation="DI" color="#fff200" id="414" name="Dysgranular insular cortex"/>
  137. <label abbreviation="GI" color="#efe4b0" id="416" name="Granular insular cortex"/>
  138. </label>
  139. <label abbreviation="Front" color="#808080" id="1061" name="Frontal region">
  140. <label abbreviation="FrA" color="#ced307" id="77" name="Frontal association cortex"/>
  141. <label abbreviation="Orb" color="#808080" id="1062" name="Orbitofrontal cortex">
  142. <label abbreviation="MO" color="#3f48cc" id="403" name="Medial orbital area"/>
  143. <label abbreviation="VO" color="#c8bfe7" id="402" name="Ventral orbital area"/>
  144. <label abbreviation="VLO" color="#ff0001" id="400" name="Ventrolateral orbital area"/>
  145. <label abbreviation="LO" color="#ffaec9" id="401" name="Lateral orbital area"/>
  146. <label abbreviation="DLO" color="#b97a57" id="404" name="Dorsolateral orbital area"/>
  147. </label>
  148. <label abbreviation="MFC" color="#808080" id="1063" name="Mediofrontal cortex">
  149. <label abbreviation="PrL" color="#a349a4" id="405" name="Prelimbic area"/>
  150. <label abbreviation="IL" color="#22b14c" id="413" name="Infralimbic area"/>
  151. </label>
  152. <label abbreviation="M" color="#808080" id="1064" name="Motor cortex">
  153. <label abbreviation="M1" color="#99d9ea" id="408" name="Primary motor area"/>
  154. <label abbreviation="M2" color="#00a2e8" id="406" name="Secondary motor area"/>
  155. <label abbreviation="Fr3" color="#880015" id="407" name="Frontal association area 3"/>
  156. </label>
  157. </label>
  158. <label abbreviation="Par" color="#808080" id="1065" name="Parietal region">
  159. <label abbreviation="SS" color="#808080" id="1066" name="Somatosensory cortex">
  160. <label abbreviation="S1" color="#808080" id="1067" name="Primary somatosensory area">
  161. <label abbreviation="S1-f" color="#ff80c0" id="420" name="Primary somatosensory area, face representation"/>
  162. <label abbreviation="S1-bf" color="#78b14c" id="425" name="Primary somatosensory area, barrel field"/>
  163. <label abbreviation="S1-dz" color="#ed1c24" id="418" name="Primary somatosensory area, dysgranular zone"/>
  164. <label abbreviation="S1-fl" color="#b90e83" id="417" name="Primary somatosensory area, forelimb representation"/>
  165. <label abbreviation="S1-hl" color="#886415" id="423" name="Primary somatosensory area, hindlimb representation"/>
  166. <label abbreviation="S1-tr" color="#e196c9" id="429" name="Primary somatosensory area, trunk representation"/>
  167. </label>
  168. <label abbreviation="S2" color="#c864fa" id="422" name="Secondary somatosensory area"/>
  169. </label>
  170. <label abbreviation="PPC" color="#808080" id="1068" name="Posterior parietal cortex">
  171. <label abbreviation="mPPC" color="#6c006c" id="433" name="Parietal association cortex, medial area"/>
  172. <label abbreviation="lPPC" color="#fff01d" id="432" name="Parietal association cortex, lateral area"/>
  173. <label abbreviation="PtP" color="#800040" id="436" name="Parietal association cortex, posterior area "/>
  174. </label>
  175. </label>
  176. <label abbreviation="Oc" color="#808080" id="1069" name="Occipital region">
  177. <label abbreviation="Vis" color="#808080" id="1070" name="Visual cortex">
  178. <label abbreviation="V1" color="#543423" id="442" name="Primary visual area"/>
  179. <label abbreviation="V2" color="#808080" id="1071" name="Secondary visual area">
  180. <label abbreviation="V2M" color="#800064" id="448" name="Secondary visual area, medial part"/>
  181. <label abbreviation="V2L" color="#ff6464" id="443" name="Secondary visual area, lateral part"/>
  182. </label>
  183. </label>
  184. </label>
  185. <label abbreviation="Te" color="#808080" id="1072" name="Temporal region">
  186. <label abbreviation="TeA" color="#008000" id="444" name="Temporal association cortex"/>
  187. <label abbreviation="Au" color="#808080" id="1019" name="Auditory cortex">
  188. <label abbreviation="Au1" color="#ffd700" id="151" name="Primary auditory area" description="Name changed to ensure consistency across hierarchical levels, from 'primary auditory cortex'"/>
  189. <label abbreviation="Au2" color="#808080" id="1073" name="Secondary auditory area">
  190. <label abbreviation="Au2-d" color="#f0ffff" id="152" name="Secondary auditory area, dorsal part" description="Name changed to ensure consistency across hierarchical levels, from 'secondary auditory cortex, dorsal area'"/>
  191. <label abbreviation="Au2-v" color="#d8bfd8" id="153" name="Secondary auditory area, ventral part" description="Name changed to ensure consistency across hierarchical levels, from 'secondary auditory cortex, ventral area'"/>
  192. </label>
  193. </label>
  194. </label>
  195. </label>
  196. </label>
  197. <label abbreviation="N-LamP" color="#808080" id="1074" name="Non-laminated pallium">
  198. <label abbreviation="CLA" color="#99d9c8" id="412" name="Claustrum"/>
  199. <label abbreviation="Endo" color="#010a64" id="500" name="Endopiriform nucleus"/>
  200. <label abbreviation="Am-u" color="#0214c8" id="501" name="Amygdaloid area, unspecified"/>
  201. </label>
  202. <label abbreviation="SubPAL" color="#808080" id="1075" name=" Subpallium">
  203. <label abbreviation="Str" color="#808080" id="1076" name="Striatum">
  204. <label abbreviation="CPu" color="#814f9b" id="197" name="Caudate putamen"/>
  205. <label abbreviation="NAc" color="#808080" id="1077" name="Nucleus accumbens">
  206. <label abbreviation="NAc-c" color="#e6d8fa" id="184" name="Nucleus accumbens, core"/>
  207. <label abbreviation="NAc-sh" color="#582f6c" id="192" name="Nucleus accumbens, shell"/>
  208. </label>
  209. <label abbreviation="VSR-u" color="#dc143c" id="199" name="Ventral striatal region, unspecified"/>
  210. </label>
  211. <label abbreviation="PAL" color="#808080" id="1028" name="Pallidum">
  212. <label abbreviation="GPe" color="#808080" id="1078" name="Globus pallidus external">
  213. <label abbreviation="GPe-m" color="#ff55ff" id="195" name="Globus pallidus external, medial part"/>
  214. <label abbreviation="GPe-l" color="#c819c8" id="198" name="Globus pallidus external, lateral part"/>
  215. </label>
  216. <label abbreviation="EP" color="#1ae7ff" id="32" name="Entopeduncular nucleus"/>
  217. <label abbreviation="VP" color="#00a2ff" id="193" name="Ventral pallidum"/>
  218. </label>
  219. <label abbreviation="BRF" color="#808080" id="1079" name="Basal forebrain region ">
  220. <label abbreviation="BFR-u" color="#e1f00d" id="82" name="Basal forebrain region, unspecified" description="Name changed to reflect the possibility for subdivision, from 'basal forebrain region'"/>
  221. <label abbreviation="BNST" color="#0008b6" id="93" name="Bed nucleus of the stria terminalis"/>
  222. <label abbreviation="Sep" color="#ff0800" id="40" name="Septal region"/>
  223. <label abbreviation="STh" color="#0000ff" id="3" name="Subthalamic nucleus"/>
  224. </label>
  225. </label>
  226. </label>
  227. <label abbreviation="Dien" color="#808080" id="1080" name="Diencephalon">
  228. <label abbreviation="Thal-Pre" color="#808080" id="1081" name="Prethalamus">
  229. <label abbreviation="RT" color="#808080" id="1033" name="Reticular (pre)thalamic nucleus" description="Name changed based on expert anatomist opinion, from 'reticular nucleus of the thalamus'">
  230. <label abbreviation="RT-u" color="#00d9ff" id="200" name="Reticular (pre)thalamic nucleus, unspecified"/>
  231. <label abbreviation="RT-a" color="#6e00ff" id="164" name="Reticular (pre)thalamic nucleus, auditory segment" description="Name changed based on expert anatomist opinion and to ensure consistency with superstructure, from 'reticular thalamic nucleus, auditory segment'"/>
  232. </label>
  233. <label abbreviation="ZI" color="#808080" id="1082" name="Zona incerta">
  234. <label abbreviation="ZI-d" color="#d8bfd9" id="235" name="Zona incerta, dorsal part"/>
  235. <label abbreviation="ZI-v" color="#4bc88a" id="236" name="Zona incerta, ventral part"/>
  236. <label abbreviation="ZI-r" color="#1e90ff" id="257" name="Zona incerta, rostral part"/>
  237. <label abbreviation="ZI-c" color="#ffe4c4" id="287" name="Zona incerta, caudal part"/>
  238. <label abbreviation="ZI-A13" color="#c2474f" id="238" name="Zona incerta, A13 dopamine cells"/>
  239. <label abbreviation="ZI-A11" color="#ffb6c1" id="284" name="Zona incerta, A11 dopamine cells"/>
  240. <label abbreviation="FoF" color="#fffafa" id="280" name="Fields of Forel"/>
  241. </label>
  242. <label abbreviation="PrG" color="#ff1900" id="204" name="Pregeniculate nucleus"/>
  243. <label abbreviation="SubG" color="#9370db" id="281" name="Subgeniculate nucleus"/>
  244. <label abbreviation="IGL" color="#000080" id="272" name="Intergeniculate leaflet"/>
  245. </label>
  246. <label abbreviation="Thal-EPI" color="#808080" id="1083" name="Epithalamus">
  247. <label abbreviation="LHb" color="#d96c00" id="206" name="Lateral habenular nucleus"/>
  248. <label abbreviation="MHb" color="#cd0018" id="207" name="Medial habenular nucleus"/>
  249. <label abbreviation="SMn" color="#de07ed" id="81" name="Nucleus of the stria medullaris"/>
  250. <label abbreviation="PG" color="#daaa3e" id="43" name="Pineal gland"/>
  251. </label>
  252. <label abbreviation="Thal-D" color="#808080" id="1084" name="Dorsal thalamus">
  253. <label abbreviation="ANT" color="#808080" id="1085" name="Anterior nuclei of the dorsal thalamus">
  254. <label abbreviation="AD" color="#830a79" id="213" name="Anterodorsal thalamic nucleus"/>
  255. <label abbreviation="AV" color="#808080" id="1086" name="Anteroventral thalamic nucleus">
  256. <label abbreviation="AV-dm" color="#ef79da" id="214" name="Anteroventral thalamic nucleus, dorsomedial part"/>
  257. <label abbreviation="AV-vl" color="#65238e" id="215" name="Anteroventral thalamic nucleus, ventrolateral part"/>
  258. </label>
  259. <label abbreviation="AM" color="#0055ff" id="254" name="Anteromedial thalamic nucleus"/>
  260. <label abbreviation="IAM" color="#f875de" id="255" name="Interanteromedial thalamic nucleus"/>
  261. <label abbreviation="DC-MID" color="#808080" id="1087" name="Dorsal-caudal midline group of the dorsal thalamus"/>
  262. <label abbreviation="PV" color="#9c3333" id="242" name="Paraventricular thalamic nuclei (anterior and posterior)"/>
  263. <label abbreviation="IMD" color="#a0522d" id="260" name="Intermediodorsal thalamic nucleus"/>
  264. <label abbreviation="PT" color="#cd0006" id="211" name="Parataenial thalamic nucleus"/>
  265. <label abbreviation="SPF" color="#e9967a" id="278" name="Subparafascicular nucleus"/>
  266. <label abbreviation="PIL" color="#e470d6" id="208" name="Posterior intralaminar nucleus"/>
  267. </label>
  268. <label abbreviation="V-MID" color="#808080" id="1088" name="Ventral midline group of the dorsal thalamus">
  269. <label abbreviation="Rh" color="#00ff11" id="216" name="Rhomboid thalamic nucleus"/>
  270. <label abbreviation="Re" color="#ffaa00" id="219" name="Reuniens thalamic nucleus"/>
  271. <label abbreviation="RRe" color="#0000cd" id="268" name="Retroreuniens thalamic nucleus"/>
  272. <label abbreviation="Xi" color="#23ffec" id="218" name="Xiphoid thalamic nucleus"/>
  273. </label>
  274. <label abbreviation="MD" color="#808080" id="1089" name="Mediodorsal nucleus of the dorsal thalamus">
  275. <label abbreviation="MD-l" color="#ff557f" id="232" name="Mediodorsal thalamic nucleus, lateral part"/>
  276. <label abbreviation="MD-c" color="#55aa00" id="233" name="Mediodorsal thalamic nucleus, central part"/>
  277. <label abbreviation="MD-m" color="#aaffff" id="240" name="Mediodorsal thalamic nucleus, medial part"/>
  278. </label>
  279. <label abbreviation="VENT" color="#808080" id="1090" name="Ventral nuclei of the dorsal thalamus">
  280. <label abbreviation="VA" color="#ff8800" id="293" name="Ventral anterior thalamic nucleus"/>
  281. <label abbreviation="VM" color="#00b97e" id="221" name="Ventromedial thalamic nucleus"/>
  282. <label abbreviation="VL" color="#aaaaff" id="231" name="Ventrolateral thalamic nucleus"/>
  283. <label abbreviation="Ang" color="#8b5d8b" id="223" name="Angular thalamic nucleus"/>
  284. <label abbreviation="VPN" color="#808080" id="1091" name="Ventral posterior thalamic nucleus">
  285. <label abbreviation="VPM" color="#ff00fe" id="227" name="Ventral posteromedial thalamic nucleus"/>
  286. <label abbreviation="VPL" color="#ab563e" id="294" name="Ventral posterolateral thalamic nucleus"/>
  287. <label abbreviation="VP-pc" color="#00ff08" id="266" name="Ventral posterior nucleus of the thalamus, parvicellular part"/>
  288. </label>
  289. <label abbreviation="SMT" color="#8200d9" id="222" name="Submedius thalamic nucleus"/>
  290. </label>
  291. <label abbreviation="ILM" color="#808080" id="1092" name="Intralaminar nuclei of the dorsal thalamus">
  292. <label abbreviation="PCN" color="#f0f8ff" id="246" name="Paracentral thalamic nucleus"/>
  293. <label abbreviation="CM" color="#e0b640" id="247" name="Central medial thalamic nucleus"/>
  294. <label abbreviation="CL" color="#9932cc" id="248" name="Central lateral thalamic nucleus"/>
  295. <label abbreviation="PF" color="#ffefd5" id="267" name="Parafascicular thalamic nucleus"/>
  296. <label abbreviation="Eth" color="#833280" id="282" name="Ethmoid-Limitans nucleus"/>
  297. </label>
  298. <label abbreviation="PoC" color="#808080" id="1093" name="Posterior complex of the dorsal thalamus">
  299. <label abbreviation="Po" color="#ffff02" id="230" name="Posterior thalamic nucleus"/>
  300. <label abbreviation="Po-t" color="#ffffc8" id="210" name="Posterior thalamic nuclear group, triangular part"/>
  301. </label>
  302. <label abbreviation="LP" color="#808080" id="1094" name="Lateral posterior (pulvinar) complex of the dorsal thalamus">
  303. <label abbreviation="LP-mr" color="#3cb371" id="285" name="Lateral posterior thalamic nucleus, mediorostral part"/>
  304. <label abbreviation="LP-mc" color="#ffebcd" id="286" name="Lateral posterior thalamic nucleus, mediocaudal part"/>
  305. <label abbreviation="LP-l" color="#c7573d" id="283" name="Lateral posterior thalamic nucleus, lateral part"/>
  306. </label>
  307. <label abbreviation="LD" color="#808080" id="1095" name="Laterodorsal thalamic nuclei of the dorsal thalamus">
  308. <label abbreviation="LD-dm" color="#ff7b00" id="228" name="Laterodorsal thalamic nucleus, dorsomedial part"/>
  309. <label abbreviation="LD-vl" color="#2b991f" id="229" name="Laterodorsal thalamic nucleus, ventrolateral part"/>
  310. <label abbreviation="DLG" color="#ffe200" id="205" name="Dorsal lateral geniculate nucleus"/>
  311. </label>
  312. <label abbreviation="MG" color="#808080" id="1032" name="Medial geniculate complex of the dorsal thalamus">
  313. <label abbreviation="MG-v" color="#833a1f" id="298" name="Medial geniculate body, ventral division"/>
  314. <label abbreviation="MG-d" color="#efa300" id="295" name="Medial geniculate body, dorsal division"/>
  315. <label abbreviation="MG-mz" color="#ff2ff2" id="150" name="Medial geniculate body, marginal zone"/>
  316. <label abbreviation="MG-m" color="#0af4d9" id="297" name="Medial geniculate body, medial division"/>
  317. <label abbreviation="MG-sg" color="#0af496" id="299" name="Medial geniculate body, suprageniculate nucleus"/>
  318. </label>
  319. </label>
  320. <label abbreviation="HY" color="#808080" id="1034" name="Hypothalamus">
  321. <label abbreviation="HTh-u" color="#e278a1" id="48" name="Hypothalamic region, unspecified" description="Name changed to reflect the possibility for subdivision, from 'hypothalamic region'"/>
  322. </label>
  323. <label abbreviation="PreT" color="#808080" id="1096" name="Pretectum">
  324. <label abbreviation="PRT" color="#ff571e" id="94" name="Pretectal region"/>
  325. <label abbreviation="Sag" color="#63cd00" id="163" name="Nucleus sagulum"/>
  326. </label>
  327. </label>
  328. <label abbreviation="Mes" color="#808080" id="1097" name="Mesencephalon">
  329. <label abbreviation="MB" color="#808080" id="1035" name="Midbrain">
  330. <label abbreviation="Tc" color="#808080" id="1036" name="Tectum">
  331. <label abbreviation="IC" color="#808080" id="1037" name="Inferior colliculus">
  332. <label abbreviation="DCIC" color="#ceff8e" id="142" name="Inferior colliculus, dorsal cortex"/>
  333. <label abbreviation="CNIC" color="#00eefe" id="143" name="Inferior colliculus, central nucleus"/>
  334. <label abbreviation="ECIC" color="#3088cb" id="145" name="Inferior colliculus, external cortex"/>
  335. </label>
  336. <label abbreviation="Su" color="#808080" id="1038" name="Superior colliculus">
  337. <label abbreviation="SuG" color="#5600dd" id="50" name="Superficial gray layer of the superior colliculus"/>
  338. <label abbreviation="SuD" color="#e1970f" id="55" name="Deeper layers of the superior colliculus"/>
  339. </label>
  340. </label>
  341. <label abbreviation="Tg" color="#808080" id="1039" name="Tegmentum">
  342. <label abbreviation="SN" color="#808080" id="1098" name="Substantia nigra">
  343. <label abbreviation="SN-r" color="#63c512" id="187" name="Substantia nigra, reticular part"/>
  344. <label abbreviation="SN-c" color="#ffff7f" id="188" name="Substantia nigra, compact part"/>
  345. <label abbreviation="SN-l" color="#009f9f" id="189" name="Substantia nigra, lateral part"/>
  346. </label>
  347. <label abbreviation="VTA" color="#7fffd4" id="196" name="Ventral tegmental area"/>
  348. <label abbreviation="PP" color="#b7c788" id="201" name="Peripeduncular nucleus"/>
  349. <label abbreviation="IP" color="#3fc0ff" id="71" name="Interpeduncular nucleus"/>
  350. <label abbreviation="PAG" color="#07ff59" id="51" name="Periaqueductal gray"/>
  351. </label>
  352. </label>
  353. <label abbreviation="BS-u" color="#9953ff" id="47" name="Brainstem, unspecified" description="Name changed to reflect the possibility for subdivision, from 'brainstem'"/>
  354. </label>
  355. <label abbreviation="Rho" color="#808080" id="1099" name="Rhombencephalon">
  356. <label abbreviation="Met" color="#808080" id="1100" name="Metencephalon">
  357. <label abbreviation="Pn" color="#00d70b" id="58" name="Pontine nuclei" description="Abbreviation changed from Osen et al. 2019 (PN)"/>
  358. <label abbreviation="Cb" color="#808080" id="1047" name="Cerebellum">
  359. <label abbreviation="Cb-m" color="#ffff01" id="4" name="Molecular cell layer of the cerebellum"/>
  360. <label abbreviation="Cb-u" color="#00ffff" id="5" name="Cerebellum, unspecified" description="Name changed to reflect the possibility for subdivision, from 'deeper cerebellum'"/>
  361. </label>
  362. </label>
  363. <label abbreviation="Myel" color="#808080" id="1101" name="Myelencephalon">
  364. <label abbreviation="VCN" color="#808080" id="1043" name="Cochlear nucleus, ventral part">
  365. <label abbreviation="AVCN" color="#2298ff" id="158" name="Ventral cochlear nucleus, anterior part"/>
  366. <label abbreviation="PVCN" color="#00e6cf" id="159" name="Ventral cochlear nucleus, posterior part"/>
  367. <label abbreviation="Cap" color="#00ff6a" id="160" name="Ventral cochlear nucleus, cap area"/>
  368. <label abbreviation="GCL" color="#000cff" id="123" name="Ventral cochlear nucleus, granule cell layer"/>
  369. </label>
  370. <label abbreviation="DCN" color="#808080" id="1044" name="Cochlear nucleus, dorsal part">
  371. <label abbreviation="DCNM" color="#5c9cd3" id="126" name="Dorsal cochlear nucleus, molecular layer"/>
  372. <label abbreviation="DCNFG" color="#00509c" id="127" name="Dorsal cochlear nucleus, fusiform and granule layer"/>
  373. <label abbreviation="DCND" color="#c5eeff" id="128" name="Dorsal cochlear nucleus, deep core"/>
  374. </label>
  375. <label abbreviation="Sp5n" color="#5bf1ff" id="75" name="Spinal trigeminal nucleus"/>
  376. <label abbreviation="PVG" color="#eb57ff" id="56" name="Periventricular gray"/>
  377. <label abbreviation="SO" color="#808080" id="1045" name="Superior olivary complex">
  378. <label abbreviation="NTB" color="#00ff51" id="131" name="Nucleus of the trapezoid body"/>
  379. <label abbreviation="SPN" color="#00eeff" id="132" name="Superior paraolivary nucleus"/>
  380. <label abbreviation="MSO" color="#dbef3d" id="133" name="Medial superior olive"/>
  381. <label abbreviation="LSO" color="#234cbe" id="134" name="Lateral superior olive"/>
  382. <label abbreviation="SPR" color="#019915" id="135" name="Superior periolivary region" description="Abbreviated as POR in Osen et al. 2019"/>
  383. <label abbreviation="VPO" color="#00aeff" id="136" name="Ventral periolivary nuclei"/>
  384. </label>
  385. <label abbreviation="NLL" color="#808080" id="1046" name="Nuclei of the lateral lemniscus">
  386. <label abbreviation="VLL" color="#ff0073" id="137" name="Lateral lemniscus, ventral nucleus"/>
  387. <label abbreviation="ILL" color="#ab105b" id="138" name="Lateral lemniscus, intermediate nucleus"/>
  388. <label abbreviation="DLL" color="#6c125b" id="139" name="Lateral lemniscus, dorsal nucleus"/>
  389. </label>
  390. <label abbreviation="IO" color="#00f60e" id="74" name="Inferior olive"/>
  391. </label>
  392. </label>
  393. </label>
  394. <label abbreviation="V" color="#727eba" id="1048" name="Ventricular system">
  395. <label abbreviation="V-u" color="#022cff" id="33" name="ventricular system, unspecified" description="Name changed to reflect the possibility for subdivision, from 'ventricular system'"/>
  396. <label abbreviation="4V" color="#341d90" id="125" name="4th ventricle"/>
  397. <label abbreviation="CC" color="#27f4fd" id="70" name="central canal"/>
  398. </label>
  399. </label>
  400. <label abbreviation="SpC" color="#86ff5a" id="45" name="spinal cord"/>
  401. <label abbreviation="IE" color="#104f18" id="1049" name="Inner ear">
  402. <label abbreviation="VeA" color="#009037" id="119" name="vestibular apparatus"/>
  403. <label abbreviation="Co" color="#00ff1c" id="120" name="cochlea"/>
  404. <label abbreviation="8cn" color="#fd9400" id="121" name="cochlear nerve" description="Abbreviation changed from Osen et al. 2019 (cn)"/>
  405. <label abbreviation="8vn" color="#fd3200" id="122" name="vestibular nerve" description="Abbreviation changed from Osen et al. 2019 (vn)"/>
  406. <label abbreviation="SpG" color="#b9ffe9" id="162" name="spiral ganglion" description="Abbreviation changed from Osen et al. 2019 (SG)"/>
  407. </label>
  408. </structure>
  409. </milf>