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Clean up and restructuring of the publication branch. At the moment, the supplement scripts are probably not functional. The Main part should be running fine however.

moritz hace 3 años
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76fce57445

La diferencia del archivo ha sido suprimido porque es demasiado grande
+ 30603 - 0
figures/spatial_network_perlin_map/A_i_colormap.svg


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figures/spatial_network_perlin_map/A_i_exemplary_input_map.pdf


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figures/spatial_network_perlin_map/B_i_axonal_clouds.pdf


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figures/spatial_network_perlin_map/C_firing_rate_map_excitatory.pdf


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figures/spatial_network_perlin_map/C_firing_rate_map_inhibitory.pdf


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figures/spatial_network_perlin_map/D_polar_plot_excitatory.pdf


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figures/spatial_network_perlin_map/D_polar_plot_inhibitory.pdf


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figures/spatial_network_perlin_map/F_hdi_over_corr_len_scaled.pdf


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figures/spatial_network_perlin_map/F_hdi_over_grid_scale.pdf


+ 1 - 1
scripts/spatial_network/perlin_map/final_analysis_and_plotting_perlin_map.py

@@ -833,7 +833,7 @@ def plot_hdi_histogram_combined_and_overlayed(traj, plot_run_names, ex_polar_plo
     # plt.annotate('probability density', (-0.2,1.5), xycoords='axes fraction', rotation=90, fontsize=18)
 
     if save_figs:
-        plt.savefig(FIGURE_SAVE_PATH + 'E_hdi_histogram_combined_and_overlayed_cutoff_{}um' + FIGURE_SAVE_FORMAT.format(cut_off_dist))
+        plt.savefig(FIGURE_SAVE_PATH + 'E_hdi_histogram_combined_and_overlayed' + FIGURE_SAVE_FORMAT.format(cut_off_dist))
         plt.close(fig)
 
     return hdi_mean_dict